CuGenDBv2

Gene ID	HG10017704
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	short integuments 2, mitochondrial
Genome location	Chr03:19438446..19439501
RNA-Seq Expression	HG10017704
Synteny	HG10017704
Gene Ontology terms	GO:0000911 - cytokinesis by cell plate formation (biological process) GO:0048481 - plant ovule development (biological process) GO:0005743 - mitochondrial inner membrane (cellular component) GO:0003924 - GTPase activity (molecular function) GO:0005525 - GTP binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004149387.2 short integuments 2, mitochondrial isoform X1 [Cucumis sativus]

1.1e-29

88.75

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Query:  DLVTAVQCALYTTLSEFDGNVEDENDLESLTEVQFDALQKAMKIPHKAAEARLKVSKKLLTLFRAGKLGPFILDDVPITK
        DLVT VQC LYTTLSEFDGNVEDEN LESL EVQF+ALQKAMK+ HKAAEARL+VSKKLLTLFRAGKLG FILDDVPITK
Subjt:  DLVTAVQCALYTTLSEFDGNVEDENDLESLTEVQFDALQKAMKIPHKAAEARLKVSKKLLTLFRAGKLGPFILDDVPITK

XP_008460756.1 PREDICTED: short integuments 2, mitochondrial isoform X1 [Cucumis melo]

1.8e-29

88.75

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Query:  DLVTAVQCALYTTLSEFDGNVEDENDLESLTEVQFDALQKAMKIPHKAAEARLKVSKKLLTLFRAGKLGPFILDDVPITK
        DLVT VQCALYTTLSEFDGNVEDEN LESL EVQF+ALQKAMK+ H AAEARL+VSKKLLTLFRAGKLG FILDDVPITK
Subjt:  DLVTAVQCALYTTLSEFDGNVEDENDLESLTEVQFDALQKAMKIPHKAAEARLKVSKKLLTLFRAGKLGPFILDDVPITK

XP_022156767.1 short integuments 2, mitochondrial isoform X1 [Momordica charantia]

1.8e-29

87.65

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Query:  DLVTAVQCALYTTLSEFDGNVEDENDLESLTEVQFDALQKAMKIPHKAAEARLKVSKKLLTLFRAGKLGPFILDDVPITKN
        DLVT VQ ALYT+LSEFDGNVEDENDLESL E+QF+ALQKAMKIPHKAAE RLKVSKKLLTLFRAGKLGPFILDDVP  K+
Subjt:  DLVTAVQCALYTTLSEFDGNVEDENDLESLTEVQFDALQKAMKIPHKAAEARLKVSKKLLTLFRAGKLGPFILDDVPITKN

XP_038883550.1 short integuments 2, mitochondrial isoform X1 [Benincasa hispida]

3.3e-31

92.5

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Query:  DLVTAVQCALYTTLSEFDGNVEDENDLESLTEVQFDALQKAMKIPHKAAEARLKVSKKLLTLFRAGKLGPFILDDVPITK
        DLVT VQ ALYTT+SEFDGNVEDENDLESL EVQF+ALQKAMKIPHKAAEARL+VSKKLLTLFRAGKLGPFILDDVPITK
Subjt:  DLVTAVQCALYTTLSEFDGNVEDENDLESLTEVQFDALQKAMKIPHKAAEARLKVSKKLLTLFRAGKLGPFILDDVPITK

XP_038883551.1 short integuments 2, mitochondrial isoform X2 [Benincasa hispida]

3.3e-31

92.5

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Query:  DLVTAVQCALYTTLSEFDGNVEDENDLESLTEVQFDALQKAMKIPHKAAEARLKVSKKLLTLFRAGKLGPFILDDVPITK
        DLVT VQ ALYTT+SEFDGNVEDENDLESL EVQF+ALQKAMKIPHKAAEARL+VSKKLLTLFRAGKLGPFILDDVPITK
Subjt:  DLVTAVQCALYTTLSEFDGNVEDENDLESLTEVQFDALQKAMKIPHKAAEARLKVSKKLLTLFRAGKLGPFILDDVPITK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KZR0 Uncharacterized protein

5.1e-30

88.75

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Query:  DLVTAVQCALYTTLSEFDGNVEDENDLESLTEVQFDALQKAMKIPHKAAEARLKVSKKLLTLFRAGKLGPFILDDVPITK
        DLVT VQC LYTTLSEFDGNVEDEN LESL EVQF+ALQKAMK+ HKAAEARL+VSKKLLTLFRAGKLG FILDDVPITK
Subjt:  DLVTAVQCALYTTLSEFDGNVEDENDLESLTEVQFDALQKAMKIPHKAAEARLKVSKKLLTLFRAGKLGPFILDDVPITK

A0A1S3CCP6 Mitochondrial GTPase 1

8.7e-30

88.75

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Query:  DLVTAVQCALYTTLSEFDGNVEDENDLESLTEVQFDALQKAMKIPHKAAEARLKVSKKLLTLFRAGKLGPFILDDVPITK
        DLVT VQCALYTTLSEFDGNVEDEN LESL EVQF+ALQKAMK+ H AAEARL+VSKKLLTLFRAGKLG FILDDVPITK
Subjt:  DLVTAVQCALYTTLSEFDGNVEDENDLESLTEVQFDALQKAMKIPHKAAEARLKVSKKLLTLFRAGKLGPFILDDVPITK

A0A5A7ULU0 Short integuments 2

8.7e-30

88.75

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Query:  DLVTAVQCALYTTLSEFDGNVEDENDLESLTEVQFDALQKAMKIPHKAAEARLKVSKKLLTLFRAGKLGPFILDDVPITK
        DLVT VQCALYTTLSEFDGNVEDEN LESL EVQF+ALQKAMK+ H AAEARL+VSKKLLTLFRAGKLG FILDDVPITK
Subjt:  DLVTAVQCALYTTLSEFDGNVEDENDLESLTEVQFDALQKAMKIPHKAAEARLKVSKKLLTLFRAGKLGPFILDDVPITK

A0A6J1DR97 short integuments 2, mitochondrial isoform X2

8.7e-30

87.65

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Query:  DLVTAVQCALYTTLSEFDGNVEDENDLESLTEVQFDALQKAMKIPHKAAEARLKVSKKLLTLFRAGKLGPFILDDVPITKN
        DLVT VQ ALYT+LSEFDGNVEDENDLESL E+QF+ALQKAMKIPHKAAE RLKVSKKLLTLFRAGKLGPFILDDVP  K+
Subjt:  DLVTAVQCALYTTLSEFDGNVEDENDLESLTEVQFDALQKAMKIPHKAAEARLKVSKKLLTLFRAGKLGPFILDDVPITKN

A0A6J1DRI9 short integuments 2, mitochondrial isoform X1

8.7e-30

87.65

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Query:  DLVTAVQCALYTTLSEFDGNVEDENDLESLTEVQFDALQKAMKIPHKAAEARLKVSKKLLTLFRAGKLGPFILDDVPITKN
        DLVT VQ ALYT+LSEFDGNVEDENDLESL E+QF+ALQKAMKIPHKAAE RLKVSKKLLTLFRAGKLGPFILDDVP  K+
Subjt:  DLVTAVQCALYTTLSEFDGNVEDENDLESLTEVQFDALQKAMKIPHKAAEARLKVSKKLLTLFRAGKLGPFILDDVPITKN

SwissProt top hits

e value

%identity

Alignment

O82497 DAR GTPase 2, mitochondrial

1.5e-10

44.74

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Query:  LVTAVQCALYTTLSEFDGNVEDENDLESLTEVQFDALQKAMKIPHKAAE-ARLKVSKKLLTLFRAGKLGPFILDDV
        +V  V+  LY T+S FDGN+EDE  + +L E QF AL+  +++P +A+E A L+V+ K+L L+R G+LG + L+ V
Subjt:  LVTAVQCALYTTLSEFDGNVEDENDLESLTEVQFDALQKAMKIPHKAAE-ARLKVSKKLLTLFRAGKLGPFILDDV

Q8L607 Short integuments 2, mitochondrial

3.3e-26

72.5

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Query:  DLVTAVQCALYTTLSEFDGNVEDENDLESLTEVQFDALQKAMKIPHKAAEARLKVSKKLLTLFRAGKLGPFILDDVPITK
        D+++ VQ +LY TLSEFDG+ EDENDLE L E QF+ LQKA+KIPHKA+EARL VSKK LTLFR G+LGPFILDDVP T+
Subjt:  DLVTAVQCALYTTLSEFDGNVEDENDLESLTEVQFDALQKAMKIPHKAAEARLKVSKKLLTLFRAGKLGPFILDDVPITK

Arabidopsis top hits

e value

%identity

Alignment

AT2G41670.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein

2.3e-27

72.5

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Query:  DLVTAVQCALYTTLSEFDGNVEDENDLESLTEVQFDALQKAMKIPHKAAEARLKVSKKLLTLFRAGKLGPFILDDVPITK
        D+++ VQ +LY TLSEFDG+ EDENDLE L E QF+ LQKA+KIPHKA+EARL VSKK LTLFR G+LGPFILDDVP T+
Subjt:  DLVTAVQCALYTTLSEFDGNVEDENDLESLTEVQFDALQKAMKIPHKAAEARLKVSKKLLTLFRAGKLGPFILDDVPITK

AT4G10650.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein

1.1e-11

44.74

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Query:  LVTAVQCALYTTLSEFDGNVEDENDLESLTEVQFDALQKAMKIPHKAAE-ARLKVSKKLLTLFRAGKLGPFILDDV
        +V  V+  LY T+S FDGN+EDE  + +L E QF AL+  +++P +A+E A L+V+ K+L L+R G+LG + L+ V
Subjt:  LVTAVQCALYTTLSEFDGNVEDENDLESLTEVQFDALQKAMKIPHKAAE-ARLKVSKKLLTLFRAGKLGPFILDDV

Sequences

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CDS sequence

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ATGGATCTTGTAACAGCAGTTCAATGCGCTCTGTACACAACTCTGTCAGAATTCGATGGTAACGTTGAAGATGAGAATGATTTAGAAAGTCTTACGGAAGTGCAGTTTGA
CGCATTGCAGAAAGCAATGAAGATACCTCATAAGGCAGCGGAAGCTCGTTTGAAAGTATCAAAGAAACTACTTACTCTATTCAGGGCAGGTAAGCTTGGTCCATTCATCC
TTGATGATGTCCCTATCACAAAAAATTGTTAG

mRNA sequence

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Protein sequence

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MDLVTAVQCALYTTLSEFDGNVEDENDLESLTEVQFDALQKAMKIPHKAAEARLKVSKKLLTLFRAGKLGPFILDDVPITKNC

HG10017704 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome