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HG10017716 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10017716
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionOrigin of replication complex subunit 6
Genome locationChr03:19770306..19772881
RNA-Seq ExpressionHG10017716
SyntenyHG10017716
Gene Ontology termsGO:0006270 - DNA replication initiation (biological process)
GO:0005664 - nuclear origin of replication recognition complex (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032322.1 origin of replication complex subunit 6 [Cucumis melo var. makuwa]2.1e-1271.88Show/hide
Query:  LHLRIEIETIINQLLSLQVAISMKTLCFDVFGISSEQKNPMDAKGNR-------EKRKLEDGGY
        ++L IEIETIINQLLS QVA SMK LCFDVFGISS +K+P DAKGNR       EKRK EDGGY
Subjt:  LHLRIEIETIINQLLSLQVAISMKTLCFDVFGISSEQKNPMDAKGNR-------EKRKLEDGGY
KAG7029958.1 Origin of replication complex subunit 6 [Cucurbita argyrosperma subsp. argyrosperma]2.9e-0671.74Show/hide
Query:  VAISMKTLCFDVFGISSEQKNPMDAKGNR-------EKRKLEDGGY
        VA SMK LCFDVFGISSE+K+P DAKGNR       EKRK EDGGY
Subjt:  VAISMKTLCFDVFGISSEQKNPMDAKGNR-------EKRKLEDGGY
XP_022946231.1 origin of replication complex subunit 6 [Cucurbita moschata]2.2e-0671.74Show/hide
Query:  VAISMKTLCFDVFGISSEQKNPMDAKGNR-------EKRKLEDGGY
        VA SMK LCFDVFGISSE+K+P DAKGNR       EKRK EDGGY
Subjt:  VAISMKTLCFDVFGISSEQKNPMDAKGNR-------EKRKLEDGGY
XP_022972855.1 origin of replication complex subunit 6 [Cucurbita maxima]2.9e-0671.74Show/hide
Query:  VAISMKTLCFDVFGISSEQKNPMDAKGNR-------EKRKLEDGGY
        VA SMK LCFDVFGISSE+K+P DAKGNR       EKRK EDGGY
Subjt:  VAISMKTLCFDVFGISSEQKNPMDAKGNR-------EKRKLEDGGY
XP_038890701.1 origin of replication complex subunit 6 [Benincasa hispida]5.9e-0773.91Show/hide
Query:  VAISMKTLCFDVFGISSEQKNPMDAKGNR-------EKRKLEDGGY
        VA SMK LCFDVFGISSE+K+P DAKGNR       EKRKLEDGGY
Subjt:  VAISMKTLCFDVFGISSEQKNPMDAKGNR-------EKRKLEDGGY
TrEMBL top hitse value%identityAlignment
A0A5A7SMQ3 Origin of replication complex subunit 61.0e-1271.88Show/hide
Query:  LHLRIEIETIINQLLSLQVAISMKTLCFDVFGISSEQKNPMDAKGNR-------EKRKLEDGGY
        ++L IEIETIINQLLS QVA SMK LCFDVFGISS +K+P DAKGNR       EKRK EDGGY
Subjt:  LHLRIEIETIINQLLSLQVAISMKTLCFDVFGISSEQKNPMDAKGNR-------EKRKLEDGGY
A0A5B7BWE2 Putative origin of replication complex subunit 67.1e-0667.39Show/hide
Query:  VAISMKTLCFDVFGISSEQKNPMDAKGNRE-------KRKLEDGGY
        V+ISMK LCFDVFGIS E+K+P D KGNRE       KR LEDGGY
Subjt:  VAISMKTLCFDVFGISSEQKNPMDAKGNRE-------KRKLEDGGY
A0A5D3BK89 Origin of replication complex subunit 69.2e-0669.57Show/hide
Query:  VAISMKTLCFDVFGISSEQKNPMDAKGNR-------EKRKLEDGGY
        VA SMK LCFDVFGISS +K+P DAKGNR       EKRK EDGGY
Subjt:  VAISMKTLCFDVFGISSEQKNPMDAKGNR-------EKRKLEDGGY
A0A6J1G325 origin of replication complex subunit 61.1e-0671.74Show/hide
Query:  VAISMKTLCFDVFGISSEQKNPMDAKGNR-------EKRKLEDGGY
        VA SMK LCFDVFGISSE+K+P DAKGNR       EKRK EDGGY
Subjt:  VAISMKTLCFDVFGISSEQKNPMDAKGNR-------EKRKLEDGGY
A0A6J1I9T7 origin of replication complex subunit 61.4e-0671.74Show/hide
Query:  VAISMKTLCFDVFGISSEQKNPMDAKGNR-------EKRKLEDGGY
        VA SMK LCFDVFGISSE+K+P DAKGNR       EKRK EDGGY
Subjt:  VAISMKTLCFDVFGISSEQKNPMDAKGNR-------EKRKLEDGGY
SwissProt top hitse value%identityAlignment
Q9ZVH3 Origin of replication complex subunit 67.5e-0554.35Show/hide
Query:  VAISMKTLCFDVFGISSEQKNPMDAKGNRE-------KRKLEDGGY
        V+ SM  LCFD  GIS E+K+  D KGNR+       KR+LEDGGY
Subjt:  VAISMKTLCFDVFGISSEQKNPMDAKGNRE-------KRKLEDGGY
Arabidopsis top hitse value%identityAlignment
AT1G26840.1 origin recognition complex protein 65.3e-0654.35Show/hide
Query:  VAISMKTLCFDVFGISSEQKNPMDAKGNRE-------KRKLEDGGY
        V+ SM  LCFD  GIS E+K+  D KGNR+       KR+LEDGGY
Subjt:  VAISMKTLCFDVFGISSEQKNPMDAKGNRE-------KRKLEDGGY

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAGAGTTTCATCACCAACCAATTGCAATTCTTGAATCAGGGTTGCATGCCAAGAACATTCAGGTTGCAATTTCTATGAAGACCTTGTGCTTTGATGTGTTTGGGAT
TTCTAGTGAACAGAAAAATCCTATGGATGCCAAAGGGAATAGAGGTATGTGTCTCTCATGTCTTCATTTGCGTATAGAAATTGAGACAATTATTAATCAATTATTGTCTT
TACAGGTTGCAATTTCTATGAAGACCTTGTGCTTTGATGTGTTTGGGATTTCTAGTGAACAGAAAAATCCTATGGATGCCAAAGGGAATAGAGAGAAAAGGAAACTTGAG
GATGGCGGCTATTGA
mRNA sequenceShow/hide mRNA sequence
ATGACAGAGTTTCATCACCAACCAATTGCAATTCTTGAATCAGGGTTGCATGCCAAGAACATTCAGGTTGCAATTTCTATGAAGACCTTGTGCTTTGATGTGTTTGGGAT
TTCTAGTGAACAGAAAAATCCTATGGATGCCAAAGGGAATAGAGGTATGTGTCTCTCATGTCTTCATTTGCGTATAGAAATTGAGACAATTATTAATCAATTATTGTCTT
TACAGGTTGCAATTTCTATGAAGACCTTGTGCTTTGATGTGTTTGGGATTTCTAGTGAACAGAAAAATCCTATGGATGCCAAAGGGAATAGAGAGAAAAGGAAACTTGAG
GATGGCGGCTATTGA
Protein sequenceShow/hide protein sequence
MTEFHHQPIAILESGLHAKNIQVAISMKTLCFDVFGISSEQKNPMDAKGNRGMCLSCLHLRIEIETIINQLLSLQVAISMKTLCFDVFGISSEQKNPMDAKGNREKRKLE
DGGY