; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10017723 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10017723
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionGag-pol polyprotein
Genome locationChr03:20185241..20185923
RNA-Seq ExpressionHG10017723
SyntenyHG10017723
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037333.1 Ulp1-like peptidase [Cucumis melo var. makuwa]2.7e-0541.03Show/hide
Query:  KSVIKERIKTLLADNHRLMTTVSELKRELNTTKSELEYVHKSVKILNYGTDDLDKILSQGKKYGDLTGLGYSKMNRRV
        +++ KERI+ L+ +N RLM  +S LK +L   +S+ +   KSVK+LN GT++LD IL+ G+      GLG+    R V
Subjt:  KSVIKERIKTLLADNHRLMTTVSELKRELNTTKSELEYVHKSVKILNYGTDDLDKILSQGKKYGDLTGLGYSKMNRRV

TYJ97574.1 Ulp1-like peptidase [Cucumis melo var. makuwa]2.7e-0541.03Show/hide
Query:  KSVIKERIKTLLADNHRLMTTVSELKRELNTTKSELEYVHKSVKILNYGTDDLDKILSQGKKYGDLTGLGYSKMNRRV
        +++ KERI+ L+ +N RLM  +S LK +L   +S+ +   KSVK+LN GT++LD IL+ G+      GLG+    R V
Subjt:  KSVIKERIKTLLADNHRLMTTVSELKRELNTTKSELEYVHKSVKILNYGTDDLDKILSQGKKYGDLTGLGYSKMNRRV

TYK01584.1 putative envelope-like protein [Cucumis melo var. makuwa]1.2e-0547.83Show/hide
Query:  KERIKTLLADNHRLMTTVSELKRELNTTKSELEYVHKSVKILNYGTDDLDKILSQGKKYGDLTGLGYSK
        +E+I  L  +N RLM  +SELK EL   K E + ++KSV++L+ GT  LD+ILS+ K   D  G+GYSK
Subjt:  KERIKTLLADNHRLMTTVSELKRELNTTKSELEYVHKSVKILNYGTDDLDKILSQGKKYGDLTGLGYSK

TYK01606.1 uncharacterized protein E5676_scaffold451G002030 [Cucumis melo var. makuwa]7.1e-0646.27Show/hide
Query:  LADNHRLMTTVSELKRELNTTKSELEYVHKSVKILNYGTDDLDKILSQGKKYGDLTGLGYSKMNRRV
        + DNHRLMT +S LK EL    SE + + KSVK+L +GT  LD +L++GK  GD   LG+ +    V
Subjt:  LADNHRLMTTVSELKRELNTTKSELEYVHKSVKILNYGTDDLDKILSQGKKYGDLTGLGYSKMNRRV

TYK11575.1 gag-pol polyprotein [Cucumis melo var. makuwa]4.6e-0543.66Show/hide
Query:  KSVIKERIKTLLADNHRLMTTVSELKRELNTTKSELEYVHKSVKILNYGTDDLDKILSQGKKYGDLTGLGY
        +++ KERI+ LL +N RLM+ +S LK +L   ++E + + KSVK+LN GT++LD IL  G       GLG+
Subjt:  KSVIKERIKTLLADNHRLMTTVSELKRELNTTKSELEYVHKSVKILNYGTDDLDKILSQGKKYGDLTGLGY

TrEMBL top hitse value%identityAlignment
A0A5A7SN07 Gag-pol polyprotein2.2e-0543.66Show/hide
Query:  KSVIKERIKTLLADNHRLMTTVSELKRELNTTKSELEYVHKSVKILNYGTDDLDKILSQGKKYGDLTGLGY
        +++ KERI+ LL +N RLM+ +S LK +L   ++E + + KSVK+LN GT++LD IL  G       GLG+
Subjt:  KSVIKERIKTLLADNHRLMTTVSELKRELNTTKSELEYVHKSVKILNYGTDDLDKILSQGKKYGDLTGLGY

A0A5A7T2Y7 Ulp1-like peptidase1.3e-0541.03Show/hide
Query:  KSVIKERIKTLLADNHRLMTTVSELKRELNTTKSELEYVHKSVKILNYGTDDLDKILSQGKKYGDLTGLGYSKMNRRV
        +++ KERI+ L+ +N RLM  +S LK +L   +S+ +   KSVK+LN GT++LD IL+ G+      GLG+    R V
Subjt:  KSVIKERIKTLLADNHRLMTTVSELKRELNTTKSELEYVHKSVKILNYGTDDLDKILSQGKKYGDLTGLGYSKMNRRV

A0A5D3BER8 Ulp1-like peptidase1.3e-0541.03Show/hide
Query:  KSVIKERIKTLLADNHRLMTTVSELKRELNTTKSELEYVHKSVKILNYGTDDLDKILSQGKKYGDLTGLGYSKMNRRV
        +++ KERI+ L+ +N RLM  +S LK +L   +S+ +   KSVK+LN GT++LD IL+ G+      GLG+    R V
Subjt:  KSVIKERIKTLLADNHRLMTTVSELKRELNTTKSELEYVHKSVKILNYGTDDLDKILSQGKKYGDLTGLGYSKMNRRV

A0A5D3BQY7 Putative envelope-like protein5.8e-0647.83Show/hide
Query:  KERIKTLLADNHRLMTTVSELKRELNTTKSELEYVHKSVKILNYGTDDLDKILSQGKKYGDLTGLGYSK
        +E+I  L  +N RLM  +SELK EL   K E + ++KSV++L+ GT  LD+ILS+ K   D  G+GYSK
Subjt:  KERIKTLLADNHRLMTTVSELKRELNTTKSELEYVHKSVKILNYGTDDLDKILSQGKKYGDLTGLGYSK

A0A5D3BTR4 Uncharacterized protein3.4e-0646.27Show/hide
Query:  LADNHRLMTTVSELKRELNTTKSELEYVHKSVKILNYGTDDLDKILSQGKKYGDLTGLGYSKMNRRV
        + DNHRLMT +S LK EL    SE + + KSVK+L +GT  LD +L++GK  GD   LG+ +    V
Subjt:  LADNHRLMTTVSELKRELNTTKSELEYVHKSVKILNYGTDDLDKILSQGKKYGDLTGLGYSKMNRRV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGATAACTCCGACATCAGTGATCAGAATAAATACTCTTTTCGTTGCAGGGAATGTGAATGTTTCGATCACTATAAGTTTGAATGCCCCAATTTTCTTGAATGGAAA
GGTAAGAGCAAAGTATTATTATTGTCTAAAGAATATTTTGAAGATAGCAGTGAATTTGAAGAAGATGTCAAAGCTCTTGTCAACAACATTACCGAAGACATTTATTTATG
CAAAAGGCAAGAAGAAGATTACAGTGGCTGTAGTGAAGAAGAAGATATGTTTGAATCGATTGAAAAGTGTTATCAAAGAAAGAATAAAGACTCTCCTTGCTGACAATCAT
AGGCTCATGACCACTGTCTCTGAGCTTAAACGGGAGCTGAACACGACCAAGAGTGAATTGGAATATGTGCATAAATCAGTAAAGATATTGAATTATGGAACTGATGATCT
TGATAAGATTTTGTCTCAAGGTAAGAAATATGGTGATCTAACAGGTCTTGGATACTCCAAAATGAATAGAAGAGTTGATGATCAACATATTCATAAGGGGAAAGGAAAAA
TTACTGCTGGGTGTGATCAGAAGCAGATGTTTGCACCATTGTCCTCAACATCTGCTCAGACATACTCTCTCAGAAGATTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTGATAACTCCGACATCAGTGATCAGAATAAATACTCTTTTCGTTGCAGGGAATGTGAATGTTTCGATCACTATAAGTTTGAATGCCCCAATTTTCTTGAATGGAAA
GGTAAGAGCAAAGTATTATTATTGTCTAAAGAATATTTTGAAGATAGCAGTGAATTTGAAGAAGATGTCAAAGCTCTTGTCAACAACATTACCGAAGACATTTATTTATG
CAAAAGGCAAGAAGAAGATTACAGTGGCTGTAGTGAAGAAGAAGATATGTTTGAATCGATTGAAAAGTGTTATCAAAGAAAGAATAAAGACTCTCCTTGCTGACAATCAT
AGGCTCATGACCACTGTCTCTGAGCTTAAACGGGAGCTGAACACGACCAAGAGTGAATTGGAATATGTGCATAAATCAGTAAAGATATTGAATTATGGAACTGATGATCT
TGATAAGATTTTGTCTCAAGGTAAGAAATATGGTGATCTAACAGGTCTTGGATACTCCAAAATGAATAGAAGAGTTGATGATCAACATATTCATAAGGGGAAAGGAAAAA
TTACTGCTGGGTGTGATCAGAAGCAGATGTTTGCACCATTGTCCTCAACATCTGCTCAGACATACTCTCTCAGAAGATTGTAA
Protein sequenceShow/hide protein sequence
MLITPTSVIRINTLFVAGNVNVSITISLNAPIFLNGKVRAKYYYCLKNILKIAVNLKKMSKLLSTTLPKTFIYAKGKKKITVAVVKKKICLNRLKSVIKERIKTLLADNH
RLMTTVSELKRELNTTKSELEYVHKSVKILNYGTDDLDKILSQGKKYGDLTGLGYSKMNRRVDDQHIHKGKGKITAGCDQKQMFAPLSSTSAQTYSLRRL