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HG10017743 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10017743
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr03:20912466..20914520
RNA-Seq ExpressionHG10017743
SyntenyHG10017743
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038880853.1 uncharacterized protein LOC120072537 [Benincasa hispida]1.0e-0735.04Show/hide
Query:  YIRGIDASQLSLFVTVTPKDTNGINTDNMYQHGNPTNPTNPTIPTNENFCFPTYSGRDIPTMSSLDENIEPCNLADDGNDHFGGGPQSSRCTPHDGYEYG
        ++ G +AS++ LFV++TP +++G+     +QH NPT+ +NP                 I TMSSLD++IEPCNL DD ++ + G     RCT     ++G
Subjt:  YIRGIDASQLSLFVTVTPKDTNGINTDNMYQHGNPTNPTNPTIPTNENFCFPTYSGRDIPTMSSLDENIEPCNLADDGNDHFGGGPQSSRCTPHDGYEYG

Query:  YEEIYG---RPISFVHV
        Y +  G    P   +HV
Subjt:  YEEIYG---RPISFVHV
XP_038893574.1 uncharacterized protein LOC120082123 [Benincasa hispida]1.2e-0834.96Show/hide
Query:  YIRGIDASQLSLFVTVTPKDTNGINTDNMYQHGNPTNPTNPTIPTNENFCFPTYSGRDIPTMSSLDENIEPCNLADDGNDHFGGGPQSSRCTPHDGYEYG
        ++ G +ASQ+ LFV+VTP     +N+  ++QH NPT+  NP                 I TMSS+D++IEPCNL DD N+ + G     RCT     ++G
Subjt:  YIRGIDASQLSLFVTVTPKDTNGINTDNMYQHGNPTNPTNPTIPTNENFCFPTYSGRDIPTMSSLDENIEPCNLADDGNDHFGGGPQSSRCTPHDGYEYG

Query:  YEEIYGRPISFVHVIVQYGNLPI
        Y +    P   +HV   +  +P+
Subjt:  YEEIYGRPISFVHVIVQYGNLPI
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTACGTCTAGAGCAAGCATTTGTTGAAGAAGATCGTTCATCTCACCCAGAGAAGAATATAATATCAATGACGCTACTTCGCATTTTTGTAGGCTATAGTATGGAGTG
GGACCAGACCGGATACAATTATATTAGAGGCATTGATGCATCCCAATTATCATTGTTTGTAACAGTGACACCGAAGGACACTAATGGAATAAACACTGATAATATGTACC
AGCATGGCAATCCAACCAATCCAACCAATCCAACCATTCCAACAAATGAAAACTTTTGTTTTCCAACATATTCAGGGCGTGATATTCCCACCATGTCTTCCCTAGATGAG
AATATCGAGCCGTGTAACTTGGCGGACGACGGGAATGATCACTTTGGTGGAGGCCCACAATCGTCGAGATGTACACCACATGATGGATATGAGTATGGATATGAAGAAAT
ATATGGAAGACCAATCTCATTTGTTCATGTTATAGTGCAATATGGTAATCTTCCAATAGCACCTGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTACGTCTAGAGCAAGCATTTGTTGAAGAAGATCGTTCATCTCACCCAGAGAAGAATATAATATCAATGACGCTACTTCGCATTTTTGTAGGCTATAGTATGGAGTG
GGACCAGACCGGATACAATTATATTAGAGGCATTGATGCATCCCAATTATCATTGTTTGTAACAGTGACACCGAAGGACACTAATGGAATAAACACTGATAATATGTACC
AGCATGGCAATCCAACCAATCCAACCAATCCAACCATTCCAACAAATGAAAACTTTTGTTTTCCAACATATTCAGGGCGTGATATTCCCACCATGTCTTCCCTAGATGAG
AATATCGAGCCGTGTAACTTGGCGGACGACGGGAATGATCACTTTGGTGGAGGCCCACAATCGTCGAGATGTACACCACATGATGGATATGAGTATGGATATGAAGAAAT
ATATGGAAGACCAATCTCATTTGTTCATGTTATAGTGCAATATGGTAATCTTCCAATAGCACCTGTTTAG
Protein sequenceShow/hide protein sequence
MLRLEQAFVEEDRSSHPEKNIISMTLLRIFVGYSMEWDQTGYNYIRGIDASQLSLFVTVTPKDTNGINTDNMYQHGNPTNPTNPTIPTNENFCFPTYSGRDIPTMSSLDE
NIEPCNLADDGNDHFGGGPQSSRCTPHDGYEYGYEEIYGRPISFVHVIVQYGNLPIAPV