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HG10017763 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10017763
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionDBD_Tnp_Mut domain-containing protein
Genome locationChr03:21632459..21632767
RNA-Seq ExpressionHG10017763
SyntenyHG10017763
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059897.1 protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa]1.6e-1657.83Show/hide
Query:  MVKLPIVVFHNGQWNDRQCYVDYKTIGVLVDEAMRFDSFVNFIQMETQLH---SSIELSVLLDLGSTGVQHVVKILEDKDVCY
        M+KLPIVVFH+GQW+D   Y++YKT GVLVDE M F++FV+ I  E       SSI+LS+LLD G T +Q VV+I EDKDV +
Subjt:  MVKLPIVVFHNGQWNDRQCYVDYKTIGVLVDEAMRFDSFVNFIQMETQLH---SSIELSVLLDLGSTGVQHVVKILEDKDVCY

KAA0062637.1 uncharacterized protein E6C27_scaffold79G001490 [Cucumis melo var. makuwa]2.1e-1964.2Show/hide
Query:  MVKLPIVVFHNGQWNDRQCYVDYKTIGVLVDEAM-RFDSFVNFIQMETQLHSSIELSVLLDLGSTGVQHVVKILEDKDVCY
        MVKL ++VFH+GQW+++Q YVDYKT  VLVDE +  FDSFVN I+ E Q+ S IELSVLL +GS GVQHV+KI+E+KDV +
Subjt:  MVKLPIVVFHNGQWNDRQCYVDYKTIGVLVDEAM-RFDSFVNFIQMETQLHSSIELSVLLDLGSTGVQHVVKILEDKDVCY

KAA0066702.1 uncharacterized protein E6C27_scaffold271G00350 [Cucumis melo var. makuwa]1.6e-1657.83Show/hide
Query:  MVKLPIVVFHNGQWNDRQCYVDYKTIGVLVDEAMRFDSFVNFIQMETQLH---SSIELSVLLDLGSTGVQHVVKILEDKDVCY
        M+KLPIVVFH+GQW+D   Y++YKT GVLVDE M F+ FV+ I  E +     SSI+LS+LLD G T +Q+VV+I EDKDV +
Subjt:  MVKLPIVVFHNGQWNDRQCYVDYKTIGVLVDEAMRFDSFVNFIQMETQLH---SSIELSVLLDLGSTGVQHVVKILEDKDVCY

TYJ96591.1 uncharacterized protein E5676_scaffold1278G00090 [Cucumis melo var. makuwa]1.0e-1862.96Show/hide
Query:  MVKLPIVVFHNGQWNDRQCYVDYKTIGVLVDEAM-RFDSFVNFIQMETQLHSSIELSVLLDLGSTGVQHVVKILEDKDVCY
        MVKL ++VFH+GQW+++Q YVDYKT  VLVDE +  FDSFVN I+ E Q+ S IELSVLL +GS  VQHV+KI+E+KDV +
Subjt:  MVKLPIVVFHNGQWNDRQCYVDYKTIGVLVDEAM-RFDSFVNFIQMETQLHSSIELSVLLDLGSTGVQHVVKILEDKDVCY

TYK27852.1 Mutator-like transposase [Cucumis melo var. makuwa]1.1e-1759.04Show/hide
Query:  MVKLPIVVFHNGQWNDRQCYVDYKTIGVLVDEAMRFDSFVNFIQMETQLH---SSIELSVLLDLGSTGVQHVVKILEDKDVCY
        M+KLPIVVFH+GQW+D   Y++YKTIGVLVDE M F++FV+ I  E +     SSI+LS+LLD G T +Q+VV+I EDKDV +
Subjt:  MVKLPIVVFHNGQWNDRQCYVDYKTIGVLVDEAMRFDSFVNFIQMETQLH---SSIELSVLLDLGSTGVQHVVKILEDKDVCY

TrEMBL top hitse value%identityAlignment
A0A5A7T3G5 Protein FAR1-RELATED SEQUENCE 4-like7.9e-1757.83Show/hide
Query:  MVKLPIVVFHNGQWNDRQCYVDYKTIGVLVDEAMRFDSFVNFIQMETQLH---SSIELSVLLDLGSTGVQHVVKILEDKDVCY
        M+KLPIVVFH+GQW+D   Y++YKT GVLVDE M F++FV+ I  E       SSI+LS+LLD G T +Q VV+I EDKDV +
Subjt:  MVKLPIVVFHNGQWNDRQCYVDYKTIGVLVDEAMRFDSFVNFIQMETQLH---SSIELSVLLDLGSTGVQHVVKILEDKDVCY

A0A5A7V6N4 SWIM-type domain-containing protein1.0e-1964.2Show/hide
Query:  MVKLPIVVFHNGQWNDRQCYVDYKTIGVLVDEAM-RFDSFVNFIQMETQLHSSIELSVLLDLGSTGVQHVVKILEDKDVCY
        MVKL ++VFH+GQW+++Q YVDYKT  VLVDE +  FDSFVN I+ E Q+ S IELSVLL +GS GVQHV+KI+E+KDV +
Subjt:  MVKLPIVVFHNGQWNDRQCYVDYKTIGVLVDEAM-RFDSFVNFIQMETQLHSSIELSVLLDLGSTGVQHVVKILEDKDVCY

A0A5D3BD68 SWIM-type domain-containing protein5.0e-1962.96Show/hide
Query:  MVKLPIVVFHNGQWNDRQCYVDYKTIGVLVDEAM-RFDSFVNFIQMETQLHSSIELSVLLDLGSTGVQHVVKILEDKDVCY
        MVKL ++VFH+GQW+++Q YVDYKT  VLVDE +  FDSFVN I+ E Q+ S IELSVLL +GS  VQHV+KI+E+KDV +
Subjt:  MVKLPIVVFHNGQWNDRQCYVDYKTIGVLVDEAM-RFDSFVNFIQMETQLHSSIELSVLLDLGSTGVQHVVKILEDKDVCY

A0A5D3DAW8 Protein FAR1-RELATED SEQUENCE 4-like7.9e-1757.83Show/hide
Query:  MVKLPIVVFHNGQWNDRQCYVDYKTIGVLVDEAMRFDSFVNFIQMETQLH---SSIELSVLLDLGSTGVQHVVKILEDKDVCY
        M+KLPIVVFH+GQW+D   Y++YKT GVLVDE M F++FV+ I  E       SSI+LS+LLD G T +Q VV+I EDKDV +
Subjt:  MVKLPIVVFHNGQWNDRQCYVDYKTIGVLVDEAMRFDSFVNFIQMETQLH---SSIELSVLLDLGSTGVQHVVKILEDKDVCY

A0A5D3DWG1 Mutator-like transposase5.5e-1859.04Show/hide
Query:  MVKLPIVVFHNGQWNDRQCYVDYKTIGVLVDEAMRFDSFVNFIQMETQLH---SSIELSVLLDLGSTGVQHVVKILEDKDVCY
        M+KLPIVVFH+GQW+D   Y++YKTIGVLVDE M F++FV+ I  E +     SSI+LS+LLD G T +Q+VV+I EDKDV +
Subjt:  MVKLPIVVFHNGQWNDRQCYVDYKTIGVLVDEAMRFDSFVNFIQMETQLH---SSIELSVLLDLGSTGVQHVVKILEDKDVCY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTAAACTTCCAATAGTTGTTTTCCATAATGGTCAGTGGAATGATCGACAGTGCTATGTAGATTACAAAACTATTGGTGTTTTGGTTGACGAGGCGATGCGTTTTGA
CTCTTTTGTTAACTTCATACAAATGGAAACTCAACTTCATTCATCTATTGAACTTTCAGTTTTATTGGATTTAGGTAGTACTGGGGTTCAACATGTTGTCAAGATTCTTG
AAGATAAAGATGTATGTTATCTATTTGATTGTCATGTCATTGCCATATCATTGATATTTGATTGTCATGTGATCTTCATTAGATATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTAAACTTCCAATAGTTGTTTTCCATAATGGTCAGTGGAATGATCGACAGTGCTATGTAGATTACAAAACTATTGGTGTTTTGGTTGACGAGGCGATGCGTTTTGA
CTCTTTTGTTAACTTCATACAAATGGAAACTCAACTTCATTCATCTATTGAACTTTCAGTTTTATTGGATTTAGGTAGTACTGGGGTTCAACATGTTGTCAAGATTCTTG
AAGATAAAGATGTATGTTATCTATTTGATTGTCATGTCATTGCCATATCATTGATATTTGATTGTCATGTGATCTTCATTAGATATTAA
Protein sequenceShow/hide protein sequence
MVKLPIVVFHNGQWNDRQCYVDYKTIGVLVDEAMRFDSFVNFIQMETQLHSSIELSVLLDLGSTGVQHVVKILEDKDVCYLFDCHVIAISLIFDCHVIFIRY