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HG10017766 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10017766
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionPhloem lectin
Genome locationChr03:21754863..21755048
RNA-Seq ExpressionHG10017766
SyntenyHG10017766
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AAA92465.1 phloem protein 2 [Cucurbita argyrosperma]2.5e-0447.27Show/hide
Query:  MDPEEIEARKYLGVRVQFDHCLNYILPQASEKIQYASYIPLWDQLQYGIALNNGS
        MD +E EAR+ LG  V+  HCL+ IL  A   + Y S++ L+DQL  GI LN G+
Subjt:  MDPEEIEARKYLGVRVQFDHCLNYILPQASEKIQYASYIPLWDQLQYGIALNNGS

WP_219729244.1 PP2 domain-containing protein, partial [Pectobacterium odoriferum]6.4e-1671.43Show/hide
Query:  MDPEEIEARKYLGVRVQFDHCLNYILPQASEKIQYASYIPLWDQLQYGIALNNGSE
        MDPEE+EARKYLG++VQ  HCL+YILPQA EK+ + SYIPL+DQL YGI+LNNG++
Subjt:  MDPEEIEARKYLGVRVQFDHCLNYILPQASEKIQYASYIPLWDQLQYGIALNNGSE

XP_022927329.1 lectin-like [Cucurbita moschata]2.5e-0447.27Show/hide
Query:  MDPEEIEARKYLGVRVQFDHCLNYILPQASEKIQYASYIPLWDQLQYGIALNNGS
        MD +E EAR+ LG  V+  HCL+ IL  A   + Y S++ L+DQL  GI LN G+
Subjt:  MDPEEIEARKYLGVRVQFDHCLNYILPQASEKIQYASYIPLWDQLQYGIALNNGS

XP_022927634.1 lectin-like [Cucurbita moschata]2.5e-0447.27Show/hide
Query:  MDPEEIEARKYLGVRVQFDHCLNYILPQASEKIQYASYIPLWDQLQYGIALNNGS
        MD +E EAR+ LG  V+  HCL+ IL  A   + Y S++ L+DQL  GI LN G+
Subjt:  MDPEEIEARKYLGVRVQFDHCLNYILPQASEKIQYASYIPLWDQLQYGIALNNGS

XP_038893562.1 lectin-like [Benincasa hispida]3.2e-0747.27Show/hide
Query:  MDPEEIEARKYLGVRVQFDHCLNYILPQASEKIQYASYIPLWDQLQYGIALNNGS
        MDPEE+EARKYLGV++ + H L+ I   + +K+Q  +++PL+DQL  G++ N G+
Subjt:  MDPEEIEARKYLGVRVQFDHCLNYILPQASEKIQYASYIPLWDQLQYGIALNNGS

TrEMBL top hitse value%identityAlignment
A0A6J1EHP6 lectin-like1.2e-0447.27Show/hide
Query:  MDPEEIEARKYLGVRVQFDHCLNYILPQASEKIQYASYIPLWDQLQYGIALNNGS
        MD +E EAR+ LG  V+  HCL+ IL  A   + Y S++ L+DQL  GI LN G+
Subjt:  MDPEEIEARKYLGVRVQFDHCLNYILPQASEKIQYASYIPLWDQLQYGIALNNGS

A0A6J1EHQ4 lectin-like1.2e-0447.27Show/hide
Query:  MDPEEIEARKYLGVRVQFDHCLNYILPQASEKIQYASYIPLWDQLQYGIALNNGS
        MD +E EAR+ LG  V+  HCL+ IL  A   + Y S++ L+DQL  GI LN G+
Subjt:  MDPEEIEARKYLGVRVQFDHCLNYILPQASEKIQYASYIPLWDQLQYGIALNNGS

A0A6J1EIJ7 lectin-like1.2e-0447.27Show/hide
Query:  MDPEEIEARKYLGVRVQFDHCLNYILPQASEKIQYASYIPLWDQLQYGIALNNGS
        MD +E EAR+ LG  V+  HCL+ IL  A   + Y S++ L+DQL  GI LN G+
Subjt:  MDPEEIEARKYLGVRVQFDHCLNYILPQASEKIQYASYIPLWDQLQYGIALNNGS

Q39461 Phloem protein 21.2e-0447.27Show/hide
Query:  MDPEEIEARKYLGVRVQFDHCLNYILPQASEKIQYASYIPLWDQLQYGIALNNGS
        MD +E EAR+ LG  V+  HCL+ IL  A   + Y S++ L+DQL  GI LN G+
Subjt:  MDPEEIEARKYLGVRVQFDHCLNYILPQASEKIQYASYIPLWDQLQYGIALNNGS

Q9LLT3 Phloem protein 21.2e-0447.27Show/hide
Query:  MDPEEIEARKYLGVRVQFDHCLNYILPQASEKIQYASYIPLWDQLQYGIALNNGS
        MD +E EAR+ LG  V+  HCL+ IL  A   + Y S++ L+DQL  GI LN G+
Subjt:  MDPEEIEARKYLGVRVQFDHCLNYILPQASEKIQYASYIPLWDQLQYGIALNNGS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACCCCGAAGAGATTGAAGCAAGAAAGTATTTAGGAGTACGAGTGCAGTTTGACCATTGCTTAAATTATATTTTACCGCAGGCATCAGAAAAAATACAATATGCATC
CTACATTCCTTTATGGGATCAACTCCAATATGGGATCGCCTTGAACAATGGATCTGAGGTAAGTGTCACAATATAA
mRNA sequenceShow/hide mRNA sequence
ATGGACCCCGAAGAGATTGAAGCAAGAAAGTATTTAGGAGTACGAGTGCAGTTTGACCATTGCTTAAATTATATTTTACCGCAGGCATCAGAAAAAATACAATATGCATC
CTACATTCCTTTATGGGATCAACTCCAATATGGGATCGCCTTGAACAATGGATCTGAGGTAAGTGTCACAATATAA
Protein sequenceShow/hide protein sequence
MDPEEIEARKYLGVRVQFDHCLNYILPQASEKIQYASYIPLWDQLQYGIALNNGSEVSVTI