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HG10017816 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10017816
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionprotein cornichon homolog 1-like isoform X1
Genome locationChr03:23354363..23357483
RNA-Seq ExpressionHG10017816
SyntenyHG10017816
Gene Ontology termsGO:0016192 - vesicle-mediated transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR003377 - Cornichon


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7033543.1 Protein cornichon-like 1 [Cucurbita argyrosperma subsp. argyrosperma]3.9e-3293.98Show/hide
Query:  MFLITVPVSCYHINLFLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLIVIFRIIMVAGMKSVFDSAHEDIDIRSTVLEF
        MFLITVPVSCYHINLFLK+EHLIDVTEVFR LKREKYFRLAKLIFYLLLFL+VIFRIIMVAGMKSVFDSA +DIDIRSTVLEF
Subjt:  MFLITVPVSCYHINLFLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLIVIFRIIMVAGMKSVFDSAHEDIDIRSTVLEF

XP_022928680.1 protein cornichon homolog 1-like isoform X1 [Cucurbita moschata]3.9e-3293.98Show/hide
Query:  MFLITVPVSCYHINLFLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLIVIFRIIMVAGMKSVFDSAHEDIDIRSTVLEF
        MFLITVPVSCYHINLFLK+EHLIDVTEVFR LKREKYFRLAKLIFYLLLFL+VIFRIIMVAGMKSVFDSA +DIDIRSTVLEF
Subjt:  MFLITVPVSCYHINLFLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLIVIFRIIMVAGMKSVFDSAHEDIDIRSTVLEF

XP_022967916.1 protein cornichon homolog 1-like isoform X1 [Cucurbita maxima]3.9e-3293.98Show/hide
Query:  MFLITVPVSCYHINLFLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLIVIFRIIMVAGMKSVFDSAHEDIDIRSTVLEF
        MFLITVPVSCYHINLFLK+EHLIDVTEVFR LKREKYFRLAKLIFYLLLFL+VIFRIIMVAGMKSVFDSA +DIDIRSTVLEF
Subjt:  MFLITVPVSCYHINLFLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLIVIFRIIMVAGMKSVFDSAHEDIDIRSTVLEF

XP_023543605.1 protein cornichon homolog 1-like isoform X1 [Cucurbita pepo subsp. pepo]3.9e-3293.98Show/hide
Query:  MFLITVPVSCYHINLFLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLIVIFRIIMVAGMKSVFDSAHEDIDIRSTVLEF
        MFLITVPVSCYHINLFLK+EHLIDVTEVFR LKREKYFRLAKLIFYLLLFL+VIFRIIMVAGMKSVFDSA +DIDIRSTVLEF
Subjt:  MFLITVPVSCYHINLFLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLIVIFRIIMVAGMKSVFDSAHEDIDIRSTVLEF

XP_038883915.1 protein cornichon homolog 1 isoform X1 [Benincasa hispida]6.0e-3397.59Show/hide
Query:  MFLITVPVSCYHINLFLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLIVIFRIIMVAGMKSVFDSAHEDIDIRSTVLEF
        MFLITVPVSCYHINLFLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLIVIFRIIMVAGMKSVFDSA EDIDIRS+VLEF
Subjt:  MFLITVPVSCYHINLFLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLIVIFRIIMVAGMKSVFDSAHEDIDIRSTVLEF

TrEMBL top hitse value%identityAlignment
A0A1S3B5Z0 protein cornichon homolog 1 isoform X11.2e-3193.98Show/hide
Query:  MFLITVPVSCYHINLFLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLIVIFRIIMVAGMKSVFDSAHEDIDIRSTVLEF
        MFLITVPV+CYHINLFLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLIVIFRIIMVA MKSVFDSA EDIDIRS+VLE+
Subjt:  MFLITVPVSCYHINLFLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLIVIFRIIMVAGMKSVFDSAHEDIDIRSTVLEF

A0A6J1EB17 protein cornichon homolog 1-like isoform X22.4e-3293.98Show/hide
Query:  MFLITVPVSCYHINLFLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLIVIFRIIMVAGMKSVFDSAHEDIDIRSTVLEF
        MFLITVPVSCYHINLFLKREHLIDVTEVF+ LKREKYFR AKLIFYLLLFL+VIFRIIMVAGMKSVFDSA EDIDIRSTVLEF
Subjt:  MFLITVPVSCYHINLFLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLIVIFRIIMVAGMKSVFDSAHEDIDIRSTVLEF

A0A6J1ESA6 protein cornichon homolog 1-like isoform X11.9e-3293.98Show/hide
Query:  MFLITVPVSCYHINLFLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLIVIFRIIMVAGMKSVFDSAHEDIDIRSTVLEF
        MFLITVPVSCYHINLFLK+EHLIDVTEVFR LKREKYFRLAKLIFYLLLFL+VIFRIIMVAGMKSVFDSA +DIDIRSTVLEF
Subjt:  MFLITVPVSCYHINLFLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLIVIFRIIMVAGMKSVFDSAHEDIDIRSTVLEF

A0A6J1HRR4 protein cornichon homolog 1-like isoform X22.4e-3293.98Show/hide
Query:  MFLITVPVSCYHINLFLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLIVIFRIIMVAGMKSVFDSAHEDIDIRSTVLEF
        MFLITVPVSCYHINLFLKREHLIDVTEVF+ LKREKYFR AKLIFYLLLFL+VIFRIIMVAGMKSVFDSA EDIDIRSTVLEF
Subjt:  MFLITVPVSCYHINLFLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLIVIFRIIMVAGMKSVFDSAHEDIDIRSTVLEF

A0A6J1HTE7 protein cornichon homolog 1-like isoform X11.9e-3293.98Show/hide
Query:  MFLITVPVSCYHINLFLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLIVIFRIIMVAGMKSVFDSAHEDIDIRSTVLEF
        MFLITVPVSCYHINLFLK+EHLIDVTEVFR LKREKYFRLAKLIFYLLLFL+VIFRIIMVAGMKSVFDSA +DIDIRSTVLEF
Subjt:  MFLITVPVSCYHINLFLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLIVIFRIIMVAGMKSVFDSAHEDIDIRSTVLEF

SwissProt top hitse value%identityAlignment
Q9C7D7 Protein cornichon homolog 14.0e-0851.67Show/hide
Query:  FLITVPVSCYHINLFLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLIVIFRIIMVA
        FL+ VPV+ YH  L+ +R +LIDVTEVFR +  EK  R  KL FY+ LF++V+FR+ + A
Subjt:  FLITVPVSCYHINLFLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLIVIFRIIMVA

Arabidopsis top hitse value%identityAlignment
AT1G12340.1 Cornichon family protein2.1e-0442.62Show/hide
Query:  MFLITVPVSCYHINLFLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLIVIFRIIMVA
        M L+ +P   Y+ +L+ KR+HL+DVTE+F  L  EK  RL KL + +L   + IF +I  A
Subjt:  MFLITVPVSCYHINLFLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLIVIFRIIMVA

AT1G12390.1 Cornichon family protein2.1e-0442.62Show/hide
Query:  MFLITVPVSCYHINLFLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLIVIFRIIMVA
        M L+ +P   Y+ +L+ KR+HL+DVTE+F  L  EK  RL KL + +L   + IF +I  A
Subjt:  MFLITVPVSCYHINLFLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLIVIFRIIMVA

AT1G62880.1 Cornichon family protein1.6e-0443.1Show/hide
Query:  MFLITVPVSCYHINLFLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLIVIFRII
        M L+ VP   Y+ +L+ +++HLIDVTE+F  L  EK  RL KL + +L   + IF +I
Subjt:  MFLITVPVSCYHINLFLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLIVIFRII

AT3G12180.1 Cornichon family protein2.9e-0951.67Show/hide
Query:  FLITVPVSCYHINLFLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLIVIFRIIMVA
        FL+ VPV+ YH  L+ +R +LIDVTEVFR +  EK  R  KL FY+ LF++V+FR+ + A
Subjt:  FLITVPVSCYHINLFLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLIVIFRIIMVA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTCTTATAACGGTTCCTGTTAGCTGCTATCACATAAATTTGTTCTTGAAGAGGGAGCATCTTATTGATGTCACTGAGGTGTTTAGAGCTCTTAAACGTGAGAAATA
TTTCCGTTTGGCCAAGCTTATCTTCTACTTGCTTCTGTTCCTCATAGTAATATTCAGAATAATAATGGTTGCAGGAATGAAATCTGTTTTTGACTCTGCACATGAAGATA
TAGACATTCGCTCCACTGTTCTCGAATTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTTCTTATAACGGTTCCTGTTAGCTGCTATCACATAAATTTGTTCTTGAAGAGGGAGCATCTTATTGATGTCACTGAGGTGTTTAGAGCTCTTAAACGTGAGAAATA
TTTCCGTTTGGCCAAGCTTATCTTCTACTTGCTTCTGTTCCTCATAGTAATATTCAGAATAATAATGGTTGCAGGAATGAAATCTGTTTTTGACTCTGCACATGAAGATA
TAGACATTCGCTCCACTGTTCTCGAATTCTAG
Protein sequenceShow/hide protein sequence
MFLITVPVSCYHINLFLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLIVIFRIIMVAGMKSVFDSAHEDIDIRSTVLEF