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HG10017831 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10017831
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr03:23749418..23749630
RNA-Seq ExpressionHG10017831
SyntenyHG10017831
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ABK92800.1 unknown [Populus trichocarpa]4.4e-0552.17Show/hide
Query:  AKLFISKAFLVAVLILAVCSTGIFVSGVADDFAPAPAPAREAGSGFSLPVSGAIVGSSLLLSLLHLLRH
        A++ I KAFL+ +LI A     +  +  ++  APAPAP  EAG+GFSLPVSGA+VG SL++SLL  L+H
Subjt:  AKLFISKAFLVAVLILAVCSTGIFVSGVADDFAPAPAPAREAGSGFSLPVSGAIVGSSLLLSLLHLLRH

KAG6743831.1 hypothetical protein POTOM_052534 [Populus tomentosa]1.2e-0557.89Show/hide
Query:  VLILAVCSTGIFVSGVADDFAPAPAPAREAGSGFSLPVSGAIVGSSLLLSLLHLLRH
        VL+L + +    VSG   + APAPAP  +AG+GFSLPVSGAIVG SL++SLL  L+H
Subjt:  VLILAVCSTGIFVSGVADDFAPAPAPAREAGSGFSLPVSGAIVGSSLLLSLLHLLRH

KAG6769237.1 hypothetical protein POTOM_024855 [Populus tomentosa]5.2e-0657.14Show/hide
Query:  AKLFISKAFLVAVLILAVCSTGIFVSGV-ADDFAPAPAPAREAGSGFSLPVSGAIVGSSLLLSLLHLLRH
        A++ ISKAFL+ ++I A       VSG  ++  APAPAP  EAG+GFSLPVSGAIVG SL++SLL  L+H
Subjt:  AKLFISKAFLVAVLILAVCSTGIFVSGV-ADDFAPAPAPAREAGSGFSLPVSGAIVGSSLLLSLLHLLRH

PNS97965.1 hypothetical protein POPTR_016G052200 [Populus trichocarpa]2.0e-0552.86Show/hide
Query:  MAKLFISKAFLVAVLILAVCSTGIFVSGVADDFAPAPAPAREAGSGFSLPVSGAIVGSSLLLSLLHLLRH
        MA+  I KA    VL+L + +    VS    + APAPAP  +AG+GFSLPVSGAIVG SL++SLL  L+H
Subjt:  MAKLFISKAFLVAVLILAVCSTGIFVSGVADDFAPAPAPAREAGSGFSLPVSGAIVGSSLLLSLLHLLRH

PNT29920.1 hypothetical protein POPTR_006G056000 [Populus trichocarpa]1.2e-0552.17Show/hide
Query:  AKLFISKAFLVAVLILAVCSTGIFVSGVADDFAPAPAPAREAGSGFSLPVSGAIVGSSLLLSLLHLLRH
        A++ I KAFL   L L + +  +  +  ++  APAPAP  EAG+GFSLPVSGAIVG SL++SLL  L+H
Subjt:  AKLFISKAFLVAVLILAVCSTGIFVSGVADDFAPAPAPAREAGSGFSLPVSGAIVGSSLLLSLLHLLRH

TrEMBL top hitse value%identityAlignment
A0A2K1XB04 Uncharacterized protein6.3e-0552.17Show/hide
Query:  MAKLFISKAFLVAVLILAVCSTGIFVSGVADDFAPAPAPAREAGSGFSLPVSGAIVGSSLLLSLLHLLR
        + ++ ISKAF    L+LA+ +  + VS    + APAPAP  +AG+GFSLPVSGA+VG SL LSLL  L+
Subjt:  MAKLFISKAFLVAVLILAVCSTGIFVSGVADDFAPAPAPAREAGSGFSLPVSGAIVGSSLLLSLLHLLR

A0A6A1V378 Uncharacterized protein3.7e-0552.17Show/hide
Query:  MAKLFISKAFLVAVLILAVCSTGIFVSGVADDFAPAPAPAREAGSGFSLPVSGAIVGSSLLLSLLHLLR
        MA++ ISKA L+ VL++AV S    VS +  + APAPAP  + G+ FS+PVS  ++GSSL LSLL LL+
Subjt:  MAKLFISKAFLVAVLILAVCSTGIFVSGVADDFAPAPAPAREAGSGFSLPVSGAIVGSSLLLSLLHLLR

A9P8U7 Uncharacterized protein2.2e-0552.17Show/hide
Query:  AKLFISKAFLVAVLILAVCSTGIFVSGVADDFAPAPAPAREAGSGFSLPVSGAIVGSSLLLSLLHLLRH
        A++ I KAFL+ +LI A     +  +  ++  APAPAP  EAG+GFSLPVSGA+VG SL++SLL  L+H
Subjt:  AKLFISKAFLVAVLILAVCSTGIFVSGVADDFAPAPAPAREAGSGFSLPVSGAIVGSSLLLSLLHLLRH

U5FKQ0 Uncharacterized protein9.7e-0652.86Show/hide
Query:  MAKLFISKAFLVAVLILAVCSTGIFVSGVADDFAPAPAPAREAGSGFSLPVSGAIVGSSLLLSLLHLLRH
        MA+  I KA    VL+L + +    VS    + APAPAP  +AG+GFSLPVSGAIVG SL++SLL  L+H
Subjt:  MAKLFISKAFLVAVLILAVCSTGIFVSGVADDFAPAPAPAREAGSGFSLPVSGAIVGSSLLLSLLHLLRH

U7DW91 Uncharacterized protein5.7e-0652.17Show/hide
Query:  AKLFISKAFLVAVLILAVCSTGIFVSGVADDFAPAPAPAREAGSGFSLPVSGAIVGSSLLLSLLHLLRH
        A++ I KAFL   L L + +  +  +  ++  APAPAP  EAG+GFSLPVSGAIVG SL++SLL  L+H
Subjt:  AKLFISKAFLVAVLILAVCSTGIFVSGVADDFAPAPAPAREAGSGFSLPVSGAIVGSSLLLSLLHLLRH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAAGCTTTTCATCTCCAAGGCCTTCTTGGTTGCCGTCTTGATCCTTGCCGTCTGCTCCACCGGCATCTTCGTTTCTGGAGTCGCCGATGACTTCGCCCCGGCTCC
TGCTCCGGCGCGTGAGGCCGGATCTGGCTTCTCTCTTCCAGTCTCCGGCGCCATCGTTGGCTCCTCTCTTCTCCTCTCTCTTCTTCACCTTCTCAGGCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAAGCTTTTCATCTCCAAGGCCTTCTTGGTTGCCGTCTTGATCCTTGCCGTCTGCTCCACCGGCATCTTCGTTTCTGGAGTCGCCGATGACTTCGCCCCGGCTCC
TGCTCCGGCGCGTGAGGCCGGATCTGGCTTCTCTCTTCCAGTCTCCGGCGCCATCGTTGGCTCCTCTCTTCTCCTCTCTCTTCTTCACCTTCTCAGGCATTGA
Protein sequenceShow/hide protein sequence
MAKLFISKAFLVAVLILAVCSTGIFVSGVADDFAPAPAPAREAGSGFSLPVSGAIVGSSLLLSLLHLLRH