; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10017840 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10017840
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionRING/FYVE/PHD zinc finger superfamily protein, putative isoform 1
Genome locationChr03:24077189..24077550
RNA-Seq ExpressionHG10017840
SyntenyHG10017840
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060071.1 RING/FYVE/PHD zinc finger superfamily protein, putative isoform 1 [Cucumis melo var. makuwa]6.1e-2595.59Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRAYPRFRLAFSRLFASVFRVSYSR
        MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLL HTAIHT+RAYPRFRLAFSRLFAS FRVSYSR
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRAYPRFRLAFSRLFASVFRVSYSR

KAE8649764.1 hypothetical protein Csa_012384 [Cucumis sativus]3.2e-2684.34Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRAYPRFRLAFSRLFASVFRVSYSRDSIDSCCFDFVSRIL
        MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLL HTAIHT+RAYPRFRLAFSRLFASVFRVSYSR ++ S   D +S +L
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRAYPRFRLAFSRLFASVFRVSYSRDSIDSCCFDFVSRIL

KAG6595630.1 hypothetical protein SDJN03_12183, partial [Cucurbita argyrosperma subsp. sororia]3.7e-2282.43Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRAYPRFRLAFSRLFASVFRVSYSRDSIDSC
        MLQLFFAVAFSAVPLTLYVPPIRSL+LFVETLE+LLR +A HTLR YPRFR AFSRLFAS+FRVS SR + D C
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRAYPRFRLAFSRLFASVFRVSYSRDSIDSC

KAG6603254.1 hypothetical protein SDJN03_03863, partial [Cucurbita argyrosperma subsp. sororia]5.7e-2387.14Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRAYPRFRLAFSRLFASVFRVSYSRDS
        MLQLFFAVAFSA PLT YVPPIRSL+LFVETLEDL RHTA HT RAYPRFRLAFSR+F SVFRVSYSR S
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRAYPRFRLAFSRLFASVFRVSYSRDS

KAG7037385.1 hypothetical protein SDJN02_01010, partial [Cucurbita argyrosperma subsp. argyrosperma]5.7e-2387.14Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRAYPRFRLAFSRLFASVFRVSYSRDS
        MLQLFFAVAFSA PLT YVPPIRSL+LFVETLEDL RHTA HT RAYPRFRLAFSR+F SVFRVSYSR S
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRAYPRFRLAFSRLFASVFRVSYSRDS

TrEMBL top hitse value%identityAlignment
A0A0A0KZF7 Uncharacterized protein1.6e-2684.34Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRAYPRFRLAFSRLFASVFRVSYSRDSIDSCCFDFVSRIL
        MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLL HTAIHT+RAYPRFRLAFSRLFASVFRVSYSR ++ S   D +S +L
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRAYPRFRLAFSRLFASVFRVSYSRDSIDSCCFDFVSRIL

A0A2C9V7E1 Uncharacterized protein3.2e-1981.54Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRAYPRFRLAFSRLFASVFRVS
        MLQLFFAVAFSAVPLTLYVPPIRSL+ FVET+EDLLR TA ++LRAYPRFRLAFSR+F+++FR+S
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRAYPRFRLAFSRLFASVFRVS

A0A5A7V2T5 RING/FYVE/PHD zinc finger superfamily protein, putative isoform 13.0e-2595.59Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRAYPRFRLAFSRLFASVFRVSYSR
        MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLL HTAIHT+RAYPRFRLAFSRLFAS FRVSYSR
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRAYPRFRLAFSRLFASVFRVSYSR

A0A6P6AMB2 uncharacterized protein LOC111310902 isoform X19.2e-1978.46Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRAYPRFRLAFSRLFASVFRVS
        MLQLFFAVAFSAVPLTLYVPPIRSL+LFVET+ED+LR T ++TLRAYPR RL FSR+F S+F +S
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRAYPRFRLAFSRLFASVFRVS

A0A6P6AMC9 uncharacterized protein LOC111310902 isoform X29.2e-1978.46Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRAYPRFRLAFSRLFASVFRVS
        MLQLFFAVAFSAVPLTLYVPPIRSL+LFVET+ED+LR T ++TLRAYPR RL FSR+F S+F +S
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRAYPRFRLAFSRLFASVFRVS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G52105.1 unknown protein1.7e-1253.85Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRAYPRFRLAFSRLFASVFRVS
        MLQLFF +AFSA PLTLY+PPIR L++FVET+E++     +++ R +PR R+A+SRL    F  S
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRAYPRFRLAFSRLFASVFRVS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCAGCTGTTCTTCGCCGTCGCTTTCTCGGCCGTCCCATTGACGCTCTATGTGCCGCCGATTCGGAGCCTCAGTCTCTTCGTTGAAACCCTAGAAGATCTTCTCCG
TCACACCGCCATTCATACGCTCAGAGCTTATCCTCGTTTCCGCCTTGCCTTCTCTCGCCTCTTCGCCTCTGTATTCCGCGTTTCTTATTCCAGAGATTCGATCGATTCGT
GTTGTTTTGATTTTGTGTCTAGGATCTTGAATCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTTCAGCTGTTCTTCGCCGTCGCTTTCTCGGCCGTCCCATTGACGCTCTATGTGCCGCCGATTCGGAGCCTCAGTCTCTTCGTTGAAACCCTAGAAGATCTTCTCCG
TCACACCGCCATTCATACGCTCAGAGCTTATCCTCGTTTCCGCCTTGCCTTCTCTCGCCTCTTCGCCTCTGTATTCCGCGTTTCTTATTCCAGAGATTCGATCGATTCGT
GTTGTTTTGATTTTGTGTCTAGGATCTTGAATCTTTGA
Protein sequenceShow/hide protein sequence
MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRAYPRFRLAFSRLFASVFRVSYSRDSIDSCCFDFVSRILNL