CuGenDBv2

Gene ID	HG10017857
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Girdin-like
Genome location	Chr03:24464720..24465430
RNA-Seq Expression	HG10017857
Synteny	HG10017857
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0036949.1 girdin-like [Cucumis melo var. makuwa]

3.5e-15

29.56

Show/hide

Query:  AYVRNQILEKLRQEFVRLVEETTQTNK--KSLGTKKRTRQ-----QEDKIKKTS-------KLVNELNEIINKQKSQLIEYNEANRTLCQPIDSLHMRIK
        ++++NQ  +KL ++   L +E  + NK  +SL  +K T Q     Q++ IK          KLVN+LN  I K+++++++    N +L Q +DSLH+++ 
Subjt:  AYVRNQILEKLRQEFVRLVEETTQTNK--KSLGTKKRTRQ-----QEDKIKKTS-------KLVNELNEIINKQKSQLIEYNEANRTLCQPIDSLHMRIK

Query:  DQFEEHEILKGFAKSIDCQLQGCQRANEQLSQKYEHMEKECLALKENHDLLKDGMQIVLGKVNRILDTIRVMARGDQGYAAWARDLRENISPMAHNAHEL
        +  EE+EILK +A S+  QL   Q ++++++Q+YE +  + + +K ++D+     Q+++ +V++ ++ +R++++    +A  A DLR N   M  +A +L
Subjt:  DQFEEHEILKGFAKSIDCQLQGCQRANEQLSQKYEHMEKECLALKENHDLLKDGMQIVLGKVNRILDTIRVMARGDQGYAAWARDLRENISPMAHNAHEL

Query:  YEF
          F
Subjt:  YEF

KAA0037780.1 girdin-like [Cucumis melo var. makuwa]

2.9e-17

31.03

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Query:  AYVRNQILEKLRQEFVRLVEETTQTNK--KSLGTKKRTRQ-----QEDKIKKTS-------KLVNELNEIINKQKSQLIEYNEANRTLCQPIDSLHMRIK
        ++++NQ  +KL  +   L +E  + NK  +SL  +K T Q     Q++ IK          +LVN+LN  I K+++Q+++    N +L Q ID+LH+++ 
Subjt:  AYVRNQILEKLRQEFVRLVEETTQTNK--KSLGTKKRTRQ-----QEDKIKKTS-------KLVNELNEIINKQKSQLIEYNEANRTLCQPIDSLHMRIK

Query:  DQFEEHEILKGFAKSIDCQLQGCQRANEQLSQKYEHMEKECLALKENHDLLKDGMQIVLGKVNRILDTIRVMARGDQGYAAWARDLRENISPMAHNAHEL
        ++ EE+EILK +A S+  QL   Q ++++++Q+YE +  + + +K ++DL     Q+++ +V++ ++ +R++++   G+A WA DLR N   M  +A +L
Subjt:  DQFEEHEILKGFAKSIDCQLQGCQRANEQLSQKYEHMEKECLALKENHDLLKDGMQIVLGKVNRILDTIRVMARGDQGYAAWARDLRENISPMAHNAHEL

Query:  YEF
          F
Subjt:  YEF

KAA0062685.1 girdin-like [Cucumis melo var. makuwa]

5.4e-16

29.56

Show/hide

Query:  AYVRNQILEKLRQEFVRLVEETTQTNK--KSLGTKKRTRQ-----QEDKIKKTS-------KLVNELNEIINKQKSQLIEYNEANRTLCQPIDSLHMRIK
        ++++NQ  +KL ++   L +E  + NK  +SL  +K T Q     Q + IK          + VN+LN  I K+++Q+++    N +L Q +DSLH+++ 
Subjt:  AYVRNQILEKLRQEFVRLVEETTQTNK--KSLGTKKRTRQ-----QEDKIKKTS-------KLVNELNEIINKQKSQLIEYNEANRTLCQPIDSLHMRIK

Query:  DQFEEHEILKGFAKSIDCQLQGCQRANEQLSQKYEHMEKECLALKENHDLLKDGMQIVLGKVNRILDTIRVMARGDQGYAAWARDLRENISPMAHNAHEL
        +  EE+EILK + +S+  QL   Q ++ +++Q+YE +  + + +K ++DL     Q+++ +V++ ++ +R++++   G+A WA DLR N   +  +A +L
Subjt:  DQFEEHEILKGFAKSIDCQLQGCQRANEQLSQKYEHMEKECLALKENHDLLKDGMQIVLGKVNRILDTIRVMARGDQGYAAWARDLRENISPMAHNAHEL

Query:  YEF
          F
Subjt:  YEF

TYK18656.1 girdin-like [Cucumis melo var. makuwa]

4.2e-16

29.06

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Query:  AYVRNQILEKLRQEFVRLVEETTQTNK--KSLGTKKRTRQ-----QEDKIKKTS-------KLVNELNEIINKQKSQLIEYNEANRTLCQPIDSLHMRIK
        ++++NQ  +KL ++     +E  + NK  +SL  +K T Q     +++ IK          +LVN+LN  I K+++Q+++    N +L Q +D+LH+++ 
Subjt:  AYVRNQILEKLRQEFVRLVEETTQTNK--KSLGTKKRTRQ-----QEDKIKKTS-------KLVNELNEIINKQKSQLIEYNEANRTLCQPIDSLHMRIK

Query:  DQFEEHEILKGFAKSIDCQLQGCQRANEQLSQKYEHMEKECLALKENHDLLKDGMQIVLGKVNRILDTIRVMARGDQGYAAWARDLRENISPMAHNAHEL
        ++ EE+EILK +  S+  QL   Q ++++++Q+YE +  + + +K ++DL     Q+++ +V++ ++ +R+M++   G+A WA DLR     M  +A +L
Subjt:  DQFEEHEILKGFAKSIDCQLQGCQRANEQLSQKYEHMEKECLALKENHDLLKDGMQIVLGKVNRILDTIRVMARGDQGYAAWARDLRENISPMAHNAHEL

Query:  YEF
         +F
Subjt:  YEF

TYK23632.1 girdin-like [Cucumis melo var. makuwa]

1.1e-16

29.56

Show/hide

Query:  AYVRNQILEKLRQEFVRLVEETTQTNK--KSLGTKKRTRQ-----QEDKIKKTS-------KLVNELNEIINKQKSQLIEYNEANRTLCQPIDSLHMRIK
        ++++NQ  +KL ++   L +E  + NK  + L  +K T Q     Q++ IK          +LVN+LN  I K+++Q+++    N +L Q +DSLH+++ 
Subjt:  AYVRNQILEKLRQEFVRLVEETTQTNK--KSLGTKKRTRQ-----QEDKIKKTS-------KLVNELNEIINKQKSQLIEYNEANRTLCQPIDSLHMRIK

Query:  DQFEEHEILKGFAKSIDCQLQGCQRANEQLSQKYEHMEKECLALKENHDLLKDGMQIVLGKVNRILDTIRVMARGDQGYAAWARDLRENISPMAHNAHEL
        ++ EE+EILK +  S+  QL   Q ++++++Q+YE +  + + +K ++DL     Q+++ +V++ ++ +R++++   G+A WA DLR N   +  +A +L
Subjt:  DQFEEHEILKGFAKSIDCQLQGCQRANEQLSQKYEHMEKECLALKENHDLLKDGMQIVLGKVNRILDTIRVMARGDQGYAAWARDLRENISPMAHNAHEL

Query:  YEF
          F
Subjt:  YEF

TrEMBL top hits

e value

%identity

Alignment

A0A5A7T6E2 Girdin-like

1.7e-15

29.56

Show/hide

Query:  AYVRNQILEKLRQEFVRLVEETTQTNK--KSLGTKKRTRQ-----QEDKIKKTS-------KLVNELNEIINKQKSQLIEYNEANRTLCQPIDSLHMRIK
        ++++NQ  +KL ++   L +E  + NK  +SL  +K T Q     Q++ IK          KLVN+LN  I K+++++++    N +L Q +DSLH+++ 
Subjt:  AYVRNQILEKLRQEFVRLVEETTQTNK--KSLGTKKRTRQ-----QEDKIKKTS-------KLVNELNEIINKQKSQLIEYNEANRTLCQPIDSLHMRIK

Query:  DQFEEHEILKGFAKSIDCQLQGCQRANEQLSQKYEHMEKECLALKENHDLLKDGMQIVLGKVNRILDTIRVMARGDQGYAAWARDLRENISPMAHNAHEL
        +  EE+EILK +A S+  QL   Q ++++++Q+YE +  + + +K ++D+     Q+++ +V++ ++ +R++++    +A  A DLR N   M  +A +L
Subjt:  DQFEEHEILKGFAKSIDCQLQGCQRANEQLSQKYEHMEKECLALKENHDLLKDGMQIVLGKVNRILDTIRVMARGDQGYAAWARDLRENISPMAHNAHEL

Query:  YEF
          F
Subjt:  YEF

A0A5A7V9X6 Girdin-like

2.6e-16

29.56

Show/hide

Query:  AYVRNQILEKLRQEFVRLVEETTQTNK--KSLGTKKRTRQ-----QEDKIKKTS-------KLVNELNEIINKQKSQLIEYNEANRTLCQPIDSLHMRIK
        ++++NQ  +KL ++   L +E  + NK  +SL  +K T Q     Q + IK          + VN+LN  I K+++Q+++    N +L Q +DSLH+++ 
Subjt:  AYVRNQILEKLRQEFVRLVEETTQTNK--KSLGTKKRTRQ-----QEDKIKKTS-------KLVNELNEIINKQKSQLIEYNEANRTLCQPIDSLHMRIK

Query:  DQFEEHEILKGFAKSIDCQLQGCQRANEQLSQKYEHMEKECLALKENHDLLKDGMQIVLGKVNRILDTIRVMARGDQGYAAWARDLRENISPMAHNAHEL
        +  EE+EILK + +S+  QL   Q ++ +++Q+YE +  + + +K ++DL     Q+++ +V++ ++ +R++++   G+A WA DLR N   +  +A +L
Subjt:  DQFEEHEILKGFAKSIDCQLQGCQRANEQLSQKYEHMEKECLALKENHDLLKDGMQIVLGKVNRILDTIRVMARGDQGYAAWARDLRENISPMAHNAHEL

Query:  YEF
          F
Subjt:  YEF

A0A5D3D533 Girdin-like

2.0e-16

29.06

Show/hide

Query:  AYVRNQILEKLRQEFVRLVEETTQTNK--KSLGTKKRTRQ-----QEDKIKKTS-------KLVNELNEIINKQKSQLIEYNEANRTLCQPIDSLHMRIK
        ++++NQ  +KL ++     +E  + NK  +SL  +K T Q     +++ IK          +LVN+LN  I K+++Q+++    N +L Q +D+LH+++ 
Subjt:  AYVRNQILEKLRQEFVRLVEETTQTNK--KSLGTKKRTRQ-----QEDKIKKTS-------KLVNELNEIINKQKSQLIEYNEANRTLCQPIDSLHMRIK

Query:  DQFEEHEILKGFAKSIDCQLQGCQRANEQLSQKYEHMEKECLALKENHDLLKDGMQIVLGKVNRILDTIRVMARGDQGYAAWARDLRENISPMAHNAHEL
        ++ EE+EILK +  S+  QL   Q ++++++Q+YE +  + + +K ++DL     Q+++ +V++ ++ +R+M++   G+A WA DLR     M  +A +L
Subjt:  DQFEEHEILKGFAKSIDCQLQGCQRANEQLSQKYEHMEKECLALKENHDLLKDGMQIVLGKVNRILDTIRVMARGDQGYAAWARDLRENISPMAHNAHEL

Query:  YEF
         +F
Subjt:  YEF

A0A5D3DJ95 Girdin-like

5.3e-17

29.56

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Query:  AYVRNQILEKLRQEFVRLVEETTQTNK--KSLGTKKRTRQ-----QEDKIKKTS-------KLVNELNEIINKQKSQLIEYNEANRTLCQPIDSLHMRIK
        ++++NQ  +KL ++   L +E  + NK  + L  +K T Q     Q++ IK          +LVN+LN  I K+++Q+++    N +L Q +DSLH+++ 
Subjt:  AYVRNQILEKLRQEFVRLVEETTQTNK--KSLGTKKRTRQ-----QEDKIKKTS-------KLVNELNEIINKQKSQLIEYNEANRTLCQPIDSLHMRIK

Query:  DQFEEHEILKGFAKSIDCQLQGCQRANEQLSQKYEHMEKECLALKENHDLLKDGMQIVLGKVNRILDTIRVMARGDQGYAAWARDLRENISPMAHNAHEL
        ++ EE+EILK +  S+  QL   Q ++++++Q+YE +  + + +K ++DL     Q+++ +V++ ++ +R++++   G+A WA DLR N   +  +A +L
Subjt:  DQFEEHEILKGFAKSIDCQLQGCQRANEQLSQKYEHMEKECLALKENHDLLKDGMQIVLGKVNRILDTIRVMARGDQGYAAWARDLRENISPMAHNAHEL

Query:  YEF
          F
Subjt:  YEF

A0A5D3DUG2 Girdin-like

1.4e-17

31.03

Show/hide

Query:  AYVRNQILEKLRQEFVRLVEETTQTNK--KSLGTKKRTRQ-----QEDKIKKTS-------KLVNELNEIINKQKSQLIEYNEANRTLCQPIDSLHMRIK
        ++++NQ  +KL  +   L +E  + NK  +SL  +K T Q     Q++ IK          +LVN+LN  I K+++Q+++    N +L Q ID+LH+++ 
Subjt:  AYVRNQILEKLRQEFVRLVEETTQTNK--KSLGTKKRTRQ-----QEDKIKKTS-------KLVNELNEIINKQKSQLIEYNEANRTLCQPIDSLHMRIK

Query:  DQFEEHEILKGFAKSIDCQLQGCQRANEQLSQKYEHMEKECLALKENHDLLKDGMQIVLGKVNRILDTIRVMARGDQGYAAWARDLRENISPMAHNAHEL
        ++ EE+EILK +A S+  QL   Q ++++++Q+YE +  + + +K ++DL     Q+++ +V++ ++ +R++++   G+A WA DLR N   M  +A +L
Subjt:  DQFEEHEILKGFAKSIDCQLQGCQRANEQLSQKYEHMEKECLALKENHDLLKDGMQIVLGKVNRILDTIRVMARGDQGYAAWARDLRENISPMAHNAHEL

Query:  YEF
          F
Subjt:  YEF

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGGTAATGGAGCATACGTGAGAAATCAAATTCTTGAGAAGTTGCGACAAGAGTTCGTTCGTTTGGTGGAGGAAACAACGCAGACCAACAAAAAATCCCTGGGAACAAA
GAAGAGGACCCGCCAACAAGAAGACAAGATAAAAAAGACTTCTAAACTCGTCAATGAATTGAACGAGATTATCAACAAACAAAAATCCCAACTCATTGAGTATAATGAAG
CTAATAGAACACTATGCCAACCAATTGATAGTCTTCATATGAGAATAAAAGATCAGTTTGAAGAGCATGAGATTTTAAAAGGTTTTGCGAAGTCAATTGATTGTCAGCTC
CAAGGCTGTCAAAGAGCAAACGAGCAATTGTCGCAAAAATATGAGCATATGGAGAAAGAGTGTTTGGCGTTAAAAGAAAACCATGACCTCTTGAAGGATGGCATGCAAAT
AGTCCTTGGCAAAGTTAATAGAATATTGGACACTATCAGAGTAATGGCCAGAGGAGATCAAGGGTATGCAGCGTGGGCAAGAGATCTGCGAGAAAACATCTCACCTATGG
CTCATAATGCTCATGAATTATATGAGTTTTCTGGGGTTGATCCGTAG

mRNA sequence

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Protein sequence

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MGNGAYVRNQILEKLRQEFVRLVEETTQTNKKSLGTKKRTRQQEDKIKKTSKLVNELNEIINKQKSQLIEYNEANRTLCQPIDSLHMRIKDQFEEHEILKGFAKSIDCQL
QGCQRANEQLSQKYEHMEKECLALKENHDLLKDGMQIVLGKVNRILDTIRVMARGDQGYAAWARDLRENISPMAHNAHELYEFSGVDP

HG10017857 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome