; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10017873 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10017873
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionrRNA biogenesis protein RRP5
Genome locationChr03:24930011..24939316
RNA-Seq ExpressionHG10017873
SyntenyHG10017873
Gene Ontology termsGO:0006364 - rRNA processing (biological process)
GO:0006397 - mRNA processing (biological process)
GO:0009553 - embryo sac development (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0032040 - small-subunit processome (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR003029 - S1 domain
IPR012340 - Nucleic acid-binding, OB-fold
IPR022967 - RNA-binding domain, S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008442208.1 PREDICTED: LOW QUALITY PROTEIN: rRNA biogenesis protein RRP5 [Cucumis melo]1.5e-18791.85Show/hide
Query:  MAPPSRKSQDGPKFNKHSKKPFKSKKKTSEIAKAEAISLQIEDDVPDFPRGGGGYLKPKRGEKVRAQGDKEFQNDDLKMTTKRGKMRRKHPSNGDDLESL
        MAPPSRKSQDG K NKHSKKPFKSKKKTSE AK E +SLQIEDDVPDFPRGGGGY+   +GEKVRAQGDKEFQNDD     KRGK RRKHPSNGDDLESL
Subjt:  MAPPSRKSQDGPKFNKHSKKPFKSKKKTSEIAKAEAISLQIEDDVPDFPRGGGGYLKPKRGEKVRAQGDKEFQNDDLKMTTKRGKMRRKHPSNGDDLESL

Query:  LNNGVVGNLPKYANKITLKNINPRMKFWGVVAEVNKKDLVISLPGGLRGLVSAADAFDPILEKEIEDPEHDLLPVMFHVGQLVPCVVLQVDDDKKESGKR
        LNNGVVGNLPKYANKITLKNINPRMKFWGVVAEVNKKDLVISLPGGLRGLVSAADAFDPIL+ EIED EHDLLPVMFHVGQLVPCVVLQVDDDKKESGKR
Subjt:  LNNGVVGNLPKYANKITLKNINPRMKFWGVVAEVNKKDLVISLPGGLRGLVSAADAFDPILEKEIEDPEHDLLPVMFHVGQLVPCVVLQVDDDKKESGKR

Query:  KIWLSLRLSILYKDFSLDLLQEGMVLTSYVKSIEDHGYILHFGLTSFTGFLPKTKQSDQPGNEVYVGQLLQCVVRSIDKTRKVVYFSSDQDIVSSSVTKD
        KIWLSLRLSILYKDF+LDLLQEGMVLTSYVKSIEDHGYILHFGLTSFTGFLPKTKQSDQ GNEV+VGQLLQCVVRSIDKTRKVVYFSSDQDIVSSSV KD
Subjt:  KIWLSLRLSILYKDFSLDLLQEGMVLTSYVKSIEDHGYILHFGLTSFTGFLPKTKQSDQPGNEVYVGQLLQCVVRSIDKTRKVVYFSSDQDIVSSSVTKD

Query:  LKGISIDLLIPGMMVSARVQSTLENGILLSFLTYFNGTVDMFHLQNSFHSSNWKDYYNQNMKVSCGII
        LKGISIDLLIPGMMVSARVQSTLENGILLSFLTYFNGTVDMFHLQNSFHSSNWKD YNQNMK++  I+
Subjt:  LKGISIDLLIPGMMVSARVQSTLENGILLSFLTYFNGTVDMFHLQNSFHSSNWKDYYNQNMKVSCGII

XP_011653922.2 rRNA biogenesis protein RRP5 [Cucumis sativus]1.3e-19192.12Show/hide
Query:  MAPPSRKSQDGPKFNKHSKKPFKSKKKTSEIAKAEAISLQIEDDVPDFPRGGGGYLKPKRGEKVRAQGDKEFQNDDLKMTTKRGKMRRKHPSNGDDLESL
        MAPPSRKSQDG KFNKHSKKPF SKKKTSE AK E +SLQIEDDVPDFPRGGGGY+   +GEKVRA+GDKEFQNDDLKMTTKRGK RRKHPSNGDDLESL
Subjt:  MAPPSRKSQDGPKFNKHSKKPFKSKKKTSEIAKAEAISLQIEDDVPDFPRGGGGYLKPKRGEKVRAQGDKEFQNDDLKMTTKRGKMRRKHPSNGDDLESL

Query:  LNNGVVGNLPKYANKITLKNINPRMKFWGVVAEVNKKDLVISLPGGLRGLVSAADAFDPILEKEIEDPEHDLLPVMFHVGQLVPCVVLQVDDDKKESGKR
        LNNGVVGNLPKYANKITLKNINPRMKFWGVVAEVNKKDLVISLPGGLRGLVSAA+AFDPILEKE+ED EHDLLPVMFHVGQLVPCVVL+VDDDKKESGKR
Subjt:  LNNGVVGNLPKYANKITLKNINPRMKFWGVVAEVNKKDLVISLPGGLRGLVSAADAFDPILEKEIEDPEHDLLPVMFHVGQLVPCVVLQVDDDKKESGKR

Query:  KIWLSLRLSILYKDFSLDLLQEGMVLTSYVKSIEDHGYILHFGLTSFTGFLPKTKQSDQPGNEVYVGQLLQCVVRSIDKTRKVVYFSSDQDIVSSSVTKD
        KIWLSLRLS+LYKDF+LDLLQEGMVLTSYVKSIEDHGYILHFGLTSFTGFLPKTKQSDQ  NEV+VGQLLQCVVRSIDKTRKVVYFSSDQDIVSSSV KD
Subjt:  KIWLSLRLSILYKDFSLDLLQEGMVLTSYVKSIEDHGYILHFGLTSFTGFLPKTKQSDQPGNEVYVGQLLQCVVRSIDKTRKVVYFSSDQDIVSSSVTKD

Query:  LKGISIDLLIPGMMVSARVQSTLENGILLSFLTYFNGTVDMFHLQNSFHSSNWKDYYNQNMKVSCGII
        LKGISIDLLIPGMMVSARVQSTLENGILLSFLTYFNGTVDMFHLQNSFHSSNWKD+YNQNMK++  I+
Subjt:  LKGISIDLLIPGMMVSARVQSTLENGILLSFLTYFNGTVDMFHLQNSFHSSNWKDYYNQNMKVSCGII

XP_038881066.1 rRNA biogenesis protein RRP5 isoform X1 [Benincasa hispida]2.2e-19695.11Show/hide
Query:  MAPPSRKSQDGPKFNKHSKKPFKSKKKTSEIAKAEAISLQIEDDVPDFPRGGGGYLKPKRGEKVRAQGDKEFQNDDLKMTTKRGKMRRKHPSNGDDLESL
        MAPPSRKSQDG KFNKHSKKPFKSKKKTSEIA+AE ISLQIEDDVPDFPRGGGGYL  K+G+KVRAQGDKEFQND+LK TTKRGKMRRKHPSNGDDLESL
Subjt:  MAPPSRKSQDGPKFNKHSKKPFKSKKKTSEIAKAEAISLQIEDDVPDFPRGGGGYLKPKRGEKVRAQGDKEFQNDDLKMTTKRGKMRRKHPSNGDDLESL

Query:  LNNGVVGNLPKYANKITLKNINPRMKFWGVVAEVNKKDLVISLPGGLRGLVSAADAFDPILEKEIEDPEHDLLPVMFHVGQLVPCVVLQVDDDKKESGKR
        LNNGVVGNLPKYANKITLKNINPRMKFWGVVAEVNKKDLVISLP GLRGLVSAADAFDPILEKEIEDPEH+LLPVMFHVGQLVPCVVLQVDDDKKESGKR
Subjt:  LNNGVVGNLPKYANKITLKNINPRMKFWGVVAEVNKKDLVISLPGGLRGLVSAADAFDPILEKEIEDPEHDLLPVMFHVGQLVPCVVLQVDDDKKESGKR

Query:  KIWLSLRLSILYKDFSLDLLQEGMVLTSYVKSIEDHGYILHFGLTSFTGFLPKTKQSDQPGNEVYVGQLLQCVVRSIDKTRKVVYFSSDQDIVSSSVTKD
        KIWLSLRLSILYKDF+LDLLQEGMVLTSYVKSIEDHGYILHFGLTSFTGFLPKTKQSDQPGNEV VGQLLQCVVRSIDKTRKVVYFSSDQDIVSSSV KD
Subjt:  KIWLSLRLSILYKDFSLDLLQEGMVLTSYVKSIEDHGYILHFGLTSFTGFLPKTKQSDQPGNEVYVGQLLQCVVRSIDKTRKVVYFSSDQDIVSSSVTKD

Query:  LKGISIDLLIPGMMVSARVQSTLENGILLSFLTYFNGTVDMFHLQNSFHSSNWKDYYNQNMKVSCGII
        LKGISIDLLIPGMMVSARVQSTLENGILLSFLTYFNGTVDMFHLQNSFHSSNWKDYYNQNMKV+  I+
Subjt:  LKGISIDLLIPGMMVSARVQSTLENGILLSFLTYFNGTVDMFHLQNSFHSSNWKDYYNQNMKVSCGII

XP_038881067.1 rRNA biogenesis protein RRP5 isoform X2 [Benincasa hispida]2.2e-19695.11Show/hide
Query:  MAPPSRKSQDGPKFNKHSKKPFKSKKKTSEIAKAEAISLQIEDDVPDFPRGGGGYLKPKRGEKVRAQGDKEFQNDDLKMTTKRGKMRRKHPSNGDDLESL
        MAPPSRKSQDG KFNKHSKKPFKSKKKTSEIA+AE ISLQIEDDVPDFPRGGGGYL  K+G+KVRAQGDKEFQND+LK TTKRGKMRRKHPSNGDDLESL
Subjt:  MAPPSRKSQDGPKFNKHSKKPFKSKKKTSEIAKAEAISLQIEDDVPDFPRGGGGYLKPKRGEKVRAQGDKEFQNDDLKMTTKRGKMRRKHPSNGDDLESL

Query:  LNNGVVGNLPKYANKITLKNINPRMKFWGVVAEVNKKDLVISLPGGLRGLVSAADAFDPILEKEIEDPEHDLLPVMFHVGQLVPCVVLQVDDDKKESGKR
        LNNGVVGNLPKYANKITLKNINPRMKFWGVVAEVNKKDLVISLP GLRGLVSAADAFDPILEKEIEDPEH+LLPVMFHVGQLVPCVVLQVDDDKKESGKR
Subjt:  LNNGVVGNLPKYANKITLKNINPRMKFWGVVAEVNKKDLVISLPGGLRGLVSAADAFDPILEKEIEDPEHDLLPVMFHVGQLVPCVVLQVDDDKKESGKR

Query:  KIWLSLRLSILYKDFSLDLLQEGMVLTSYVKSIEDHGYILHFGLTSFTGFLPKTKQSDQPGNEVYVGQLLQCVVRSIDKTRKVVYFSSDQDIVSSSVTKD
        KIWLSLRLSILYKDF+LDLLQEGMVLTSYVKSIEDHGYILHFGLTSFTGFLPKTKQSDQPGNEV VGQLLQCVVRSIDKTRKVVYFSSDQDIVSSSV KD
Subjt:  KIWLSLRLSILYKDFSLDLLQEGMVLTSYVKSIEDHGYILHFGLTSFTGFLPKTKQSDQPGNEVYVGQLLQCVVRSIDKTRKVVYFSSDQDIVSSSVTKD

Query:  LKGISIDLLIPGMMVSARVQSTLENGILLSFLTYFNGTVDMFHLQNSFHSSNWKDYYNQNMKVSCGII
        LKGISIDLLIPGMMVSARVQSTLENGILLSFLTYFNGTVDMFHLQNSFHSSNWKDYYNQNMKV+  I+
Subjt:  LKGISIDLLIPGMMVSARVQSTLENGILLSFLTYFNGTVDMFHLQNSFHSSNWKDYYNQNMKVSCGII

XP_038881068.1 rRNA biogenesis protein RRP5 isoform X3 [Benincasa hispida]2.2e-19695.11Show/hide
Query:  MAPPSRKSQDGPKFNKHSKKPFKSKKKTSEIAKAEAISLQIEDDVPDFPRGGGGYLKPKRGEKVRAQGDKEFQNDDLKMTTKRGKMRRKHPSNGDDLESL
        MAPPSRKSQDG KFNKHSKKPFKSKKKTSEIA+AE ISLQIEDDVPDFPRGGGGYL  K+G+KVRAQGDKEFQND+LK TTKRGKMRRKHPSNGDDLESL
Subjt:  MAPPSRKSQDGPKFNKHSKKPFKSKKKTSEIAKAEAISLQIEDDVPDFPRGGGGYLKPKRGEKVRAQGDKEFQNDDLKMTTKRGKMRRKHPSNGDDLESL

Query:  LNNGVVGNLPKYANKITLKNINPRMKFWGVVAEVNKKDLVISLPGGLRGLVSAADAFDPILEKEIEDPEHDLLPVMFHVGQLVPCVVLQVDDDKKESGKR
        LNNGVVGNLPKYANKITLKNINPRMKFWGVVAEVNKKDLVISLP GLRGLVSAADAFDPILEKEIEDPEH+LLPVMFHVGQLVPCVVLQVDDDKKESGKR
Subjt:  LNNGVVGNLPKYANKITLKNINPRMKFWGVVAEVNKKDLVISLPGGLRGLVSAADAFDPILEKEIEDPEHDLLPVMFHVGQLVPCVVLQVDDDKKESGKR

Query:  KIWLSLRLSILYKDFSLDLLQEGMVLTSYVKSIEDHGYILHFGLTSFTGFLPKTKQSDQPGNEVYVGQLLQCVVRSIDKTRKVVYFSSDQDIVSSSVTKD
        KIWLSLRLSILYKDF+LDLLQEGMVLTSYVKSIEDHGYILHFGLTSFTGFLPKTKQSDQPGNEV VGQLLQCVVRSIDKTRKVVYFSSDQDIVSSSV KD
Subjt:  KIWLSLRLSILYKDFSLDLLQEGMVLTSYVKSIEDHGYILHFGLTSFTGFLPKTKQSDQPGNEVYVGQLLQCVVRSIDKTRKVVYFSSDQDIVSSSVTKD

Query:  LKGISIDLLIPGMMVSARVQSTLENGILLSFLTYFNGTVDMFHLQNSFHSSNWKDYYNQNMKVSCGII
        LKGISIDLLIPGMMVSARVQSTLENGILLSFLTYFNGTVDMFHLQNSFHSSNWKDYYNQNMKV+  I+
Subjt:  LKGISIDLLIPGMMVSARVQSTLENGILLSFLTYFNGTVDMFHLQNSFHSSNWKDYYNQNMKVSCGII

TrEMBL top hitse value%identityAlignment
A0A0A0L3Z5 Uncharacterized protein3.0e-19191.85Show/hide
Query:  MAPPSRKSQDGPKFNKHSKKPFKSKKKTSEIAKAEAISLQIEDDVPDFPRGGGGYLKPKRGEKVRAQGDKEFQNDDLKMTTKRGKMRRKHPSNGDDLESL
        MAPPSRKSQDG KFNKHSK+PF SKKK SE AK E +SLQIEDDVPDFPRGGGGY+   +GEKVRA+GDKEFQNDDLKMTTKRGK RRKHPSNGDDLESL
Subjt:  MAPPSRKSQDGPKFNKHSKKPFKSKKKTSEIAKAEAISLQIEDDVPDFPRGGGGYLKPKRGEKVRAQGDKEFQNDDLKMTTKRGKMRRKHPSNGDDLESL

Query:  LNNGVVGNLPKYANKITLKNINPRMKFWGVVAEVNKKDLVISLPGGLRGLVSAADAFDPILEKEIEDPEHDLLPVMFHVGQLVPCVVLQVDDDKKESGKR
        LNNGVVGNLPKYANKITLKNINPRMKFWGVVAEVNKKDLVISLPGGLRGLVSAA+AFDPILEKE+ED EHDLLPVMFHVGQLVPCVVL+VDDDKKESGKR
Subjt:  LNNGVVGNLPKYANKITLKNINPRMKFWGVVAEVNKKDLVISLPGGLRGLVSAADAFDPILEKEIEDPEHDLLPVMFHVGQLVPCVVLQVDDDKKESGKR

Query:  KIWLSLRLSILYKDFSLDLLQEGMVLTSYVKSIEDHGYILHFGLTSFTGFLPKTKQSDQPGNEVYVGQLLQCVVRSIDKTRKVVYFSSDQDIVSSSVTKD
        KIWLSLRLSILYKDF+LDLLQEGMVLTSYVKSIEDHGYILHFGLTSFTGFLPKTKQSDQ  NEV+VGQLLQCVVRSIDKTRKVVYFSSDQDIVSSSV KD
Subjt:  KIWLSLRLSILYKDFSLDLLQEGMVLTSYVKSIEDHGYILHFGLTSFTGFLPKTKQSDQPGNEVYVGQLLQCVVRSIDKTRKVVYFSSDQDIVSSSVTKD

Query:  LKGISIDLLIPGMMVSARVQSTLENGILLSFLTYFNGTVDMFHLQNSFHSSNWKDYYNQNMKVSCGII
        LKGISIDLLIPGMMVSARVQSTLENGILLSFLTYFNGTVDMFHLQNSFHSSNWKD+YNQNMK++  I+
Subjt:  LKGISIDLLIPGMMVSARVQSTLENGILLSFLTYFNGTVDMFHLQNSFHSSNWKDYYNQNMKVSCGII

A0A1S3B5U4 LOW QUALITY PROTEIN: rRNA biogenesis protein RRP57.0e-18891.85Show/hide
Query:  MAPPSRKSQDGPKFNKHSKKPFKSKKKTSEIAKAEAISLQIEDDVPDFPRGGGGYLKPKRGEKVRAQGDKEFQNDDLKMTTKRGKMRRKHPSNGDDLESL
        MAPPSRKSQDG K NKHSKKPFKSKKKTSE AK E +SLQIEDDVPDFPRGGGGY+   +GEKVRAQGDKEFQNDD     KRGK RRKHPSNGDDLESL
Subjt:  MAPPSRKSQDGPKFNKHSKKPFKSKKKTSEIAKAEAISLQIEDDVPDFPRGGGGYLKPKRGEKVRAQGDKEFQNDDLKMTTKRGKMRRKHPSNGDDLESL

Query:  LNNGVVGNLPKYANKITLKNINPRMKFWGVVAEVNKKDLVISLPGGLRGLVSAADAFDPILEKEIEDPEHDLLPVMFHVGQLVPCVVLQVDDDKKESGKR
        LNNGVVGNLPKYANKITLKNINPRMKFWGVVAEVNKKDLVISLPGGLRGLVSAADAFDPIL+ EIED EHDLLPVMFHVGQLVPCVVLQVDDDKKESGKR
Subjt:  LNNGVVGNLPKYANKITLKNINPRMKFWGVVAEVNKKDLVISLPGGLRGLVSAADAFDPILEKEIEDPEHDLLPVMFHVGQLVPCVVLQVDDDKKESGKR

Query:  KIWLSLRLSILYKDFSLDLLQEGMVLTSYVKSIEDHGYILHFGLTSFTGFLPKTKQSDQPGNEVYVGQLLQCVVRSIDKTRKVVYFSSDQDIVSSSVTKD
        KIWLSLRLSILYKDF+LDLLQEGMVLTSYVKSIEDHGYILHFGLTSFTGFLPKTKQSDQ GNEV+VGQLLQCVVRSIDKTRKVVYFSSDQDIVSSSV KD
Subjt:  KIWLSLRLSILYKDFSLDLLQEGMVLTSYVKSIEDHGYILHFGLTSFTGFLPKTKQSDQPGNEVYVGQLLQCVVRSIDKTRKVVYFSSDQDIVSSSVTKD

Query:  LKGISIDLLIPGMMVSARVQSTLENGILLSFLTYFNGTVDMFHLQNSFHSSNWKDYYNQNMKVSCGII
        LKGISIDLLIPGMMVSARVQSTLENGILLSFLTYFNGTVDMFHLQNSFHSSNWKD YNQNMK++  I+
Subjt:  LKGISIDLLIPGMMVSARVQSTLENGILLSFLTYFNGTVDMFHLQNSFHSSNWKDYYNQNMKVSCGII

A0A6J1DPI8 rRNA biogenesis protein RRP5 isoform X12.0e-17485.6Show/hide
Query:  MAPPSRKSQDGPKFNKHSKKPFKSKKKTSEIAKAEAISLQIEDDVPDFPRGGGGYLKPKRGEKVRAQGDKEFQNDDLKMTTKRGKMRRKHPSNGDDLESL
        MAPPS+KS DGPKFNKHSKK FKSKKK ++IA+ EA+SLQIEDDVPDFPRGGGG L   + EKV AQGD+EF+  DLKMTTKRGKMRRKH SN DDL+SL
Subjt:  MAPPSRKSQDGPKFNKHSKKPFKSKKKTSEIAKAEAISLQIEDDVPDFPRGGGGYLKPKRGEKVRAQGDKEFQNDDLKMTTKRGKMRRKHPSNGDDLESL

Query:  LNNGVVGNLPKYANKITLKNINPRMKFWGVVAEVNKKDLVISLPGGLRGLVSAADAFDPILEKEIEDPEHDLLPVMFHVGQLVPCVVLQVDDDKKESGKR
        LN+GVVGNLPKYANKITLKNI+PRMK WGVVAEVNKKDLVISLPGGLRGLV AADAFDPI EKEIEDPEHDLL VMF VGQLVPCVVL+VDDD KESGKR
Subjt:  LNNGVVGNLPKYANKITLKNINPRMKFWGVVAEVNKKDLVISLPGGLRGLVSAADAFDPILEKEIEDPEHDLLPVMFHVGQLVPCVVLQVDDDKKESGKR

Query:  KIWLSLRLSILYKDFSLDLLQEGMVLTSYVKSIEDHGYILHFGLTSFTGFLPKTKQSDQPGNEVYVGQLLQCVVRSIDKTRKVVYFSSDQDIVSSSVTKD
        KIWLSLRLSI+YKDFSLDLLQEGMVLTSYVKSIEDHGYILHFGL SFTGFLPKT QS  PGN+V VGQLLQCV+RSIDKTRKVVY SSDQDIVS  V KD
Subjt:  KIWLSLRLSILYKDFSLDLLQEGMVLTSYVKSIEDHGYILHFGLTSFTGFLPKTKQSDQPGNEVYVGQLLQCVVRSIDKTRKVVYFSSDQDIVSSSVTKD

Query:  LKGISIDLLIPGMMVSARVQSTLENGILLSFLTYFNGTVDMFHLQNSFHSSNWKDYYNQNMKVSCGII
        LKGISIDLL+PGMMVSARVQSTLENGI+LSFLTYFNGTVDMFHLQ+SFHSSNWK +YNQNMKV+  I+
Subjt:  LKGISIDLLIPGMMVSARVQSTLENGILLSFLTYFNGTVDMFHLQNSFHSSNWKDYYNQNMKVSCGII

A0A6J1EE30 rRNA biogenesis protein RRP52.3e-17885.98Show/hide
Query:  MAPPS----------RKSQDGPKFNKHSKKPFKSKKKTSEIAKAEAISLQIEDDVPDFPRGGGGYLKPKRGEKVRAQGDKEFQNDDLKMTTKRGKMRRKH
        MAPPS          +KS DG KFNKHSK  FKSKKKTS++AK EA+SLQIEDDVPDFPRGG G    +  +KVR QGDKEFQND  KMTTKRGKMRRKH
Subjt:  MAPPS----------RKSQDGPKFNKHSKKPFKSKKKTSEIAKAEAISLQIEDDVPDFPRGGGGYLKPKRGEKVRAQGDKEFQNDDLKMTTKRGKMRRKH

Query:  PSNGDDLESLLNNGVVGNLPKYANKITLKNINPRMKFWGVVAEVNKKDLVISLPGGLRGLVSAADAFDPILEKEIEDPEHDLLPVMFHVGQLVPCVVLQV
         SN DDL+SLLN+GVVGNLPKYANKITLKNI+PRMKFWGVVAEVNKKDLVI+LPGGLRGLVSAADAFDPILEKE+EDPEH LLPVMFHVGQLVPCVVLQV
Subjt:  PSNGDDLESLLNNGVVGNLPKYANKITLKNINPRMKFWGVVAEVNKKDLVISLPGGLRGLVSAADAFDPILEKEIEDPEHDLLPVMFHVGQLVPCVVLQV

Query:  DDDKKESGKRKIWLSLRLSILYKDFSLDLLQEGMVLTSYVKSIEDHGYILHFGLTSFTGFLPKTKQSDQPGNEVYVGQLLQCVVRSIDKTRKVVYFSSDQ
        DDDKKESGKRKIWLSLRLSILYKDFSLDLLQEGMVLTSYVKSIEDHGYILHFGLTSFTGFLPKTK SDQPGNE++VGQ+LQCVVRSIDKTRKVVY SSDQ
Subjt:  DDDKKESGKRKIWLSLRLSILYKDFSLDLLQEGMVLTSYVKSIEDHGYILHFGLTSFTGFLPKTKQSDQPGNEVYVGQLLQCVVRSIDKTRKVVYFSSDQ

Query:  DIVSSSVTKDLKGISIDLLIPGMMVSARVQSTLENGILLSFLTYFNGTVDMFHLQNSFHSSNWKDYYNQNMKVSCGII
        D VSSSV KDLKGISIDLLIPGMMVSARVQSTLENG+LLSFLTYFNGTVDMFHLQNSFHSSNWK +YNQNMKV+  I+
Subjt:  DIVSSSVTKDLKGISIDLLIPGMMVSARVQSTLENGILLSFLTYFNGTVDMFHLQNSFHSSNWKDYYNQNMKVSCGII

A0A6J1HM63 rRNA biogenesis protein RRP51.8e-17584.66Show/hide
Query:  MAPPS----------RKSQDGPKFNKHSKKPFKSKKKTSEIAKAEAISLQIEDDVPDFPRGGGGYLKPKRGEKVRAQGDKEFQNDDLKMTTKRGKMRRKH
        MAPPS          +K  DG KFNKHSK  FKSKKKTS++AK EA+SLQIEDDVPDFPRGG G    +  +K+R QGDKEFQND  KMTTKRGKMRRK+
Subjt:  MAPPS----------RKSQDGPKFNKHSKKPFKSKKKTSEIAKAEAISLQIEDDVPDFPRGGGGYLKPKRGEKVRAQGDKEFQNDDLKMTTKRGKMRRKH

Query:  PSNGDDLESLLNNGVVGNLPKYANKITLKNINPRMKFWGVVAEVNKKDLVISLPGGLRGLVSAADAFDPILEKEIEDPEHDLLPVMFHVGQLVPCVVLQV
         SN DDL+SLLN+GVVGNLPKYANKITLKNI+P+MKFWGVVAEVNKKDLVI+LPGGLRGLVSAADAFDPILEKE+EDPEH LLPVMFHVGQLVPCVVLQV
Subjt:  PSNGDDLESLLNNGVVGNLPKYANKITLKNINPRMKFWGVVAEVNKKDLVISLPGGLRGLVSAADAFDPILEKEIEDPEHDLLPVMFHVGQLVPCVVLQV

Query:  DDDKKESGKRKIWLSLRLSILYKDFSLDLLQEGMVLTSYVKSIEDHGYILHFGLTSFTGFLPKTKQSDQPGNEVYVGQLLQCVVRSIDKTRKVVYFSSDQ
        DDDKKESGKRKIWLSLRLSILYKDFSLDLLQEGMVLTSYVKSIEDHGYILHFGLTSFTGFLPKTK SDQPG E++VGQ+LQCVVRSIDKTRKVVY SSDQ
Subjt:  DDDKKESGKRKIWLSLRLSILYKDFSLDLLQEGMVLTSYVKSIEDHGYILHFGLTSFTGFLPKTKQSDQPGNEVYVGQLLQCVVRSIDKTRKVVYFSSDQ

Query:  DIVSSSVTKDLKGISIDLLIPGMMVSARVQSTLENGILLSFLTYFNGTVDMFHLQNSFHSSNWKDYYNQNMKVSCGII
        D VSSSV KDLKGISIDLLIPGMMVSARVQSTLENG+LLSFLTYFNGTVDMFHLQNSFHSSNWK +YNQNMKV+  I+
Subjt:  DIVSSSVTKDLKGISIDLLIPGMMVSARVQSTLENGILLSFLTYFNGTVDMFHLQNSFHSSNWKDYYNQNMKVSCGII

SwissProt top hitse value%identityAlignment
A7MB10 Protein RRP5 homolog4.3e-3333.01Show/hide
Query:  FPRGGGGYLKPKRGEKVRAQG---DKEFQNDDLKMTTKRGKMRRKHPSNGDDLESLLNNGVVGNLPKYANKITLKNINPRMKFWGVVAEVNKKDLVISLP
        FPR  GG  K  + EK   Q    D  F     + +TKR K+ +K P+    L+            K+   + ++++   M+  G V EVN+ +L ISLP
Subjt:  FPRGGGGYLKPKRGEKVRAQG---DKEFQNDDLKMTTKRGKMRRKHPSNGDDLESLLNNGVVGNLPKYANKITLKNINPRMKFWGVVAEVNKKDLVISLP

Query:  GGLRGLVSAADAFDPILEK-----EIEDPEHDL--LPVMFHVGQLVPCVVLQVDDDKKESGKRKIWLSLRLSILYKDFSLDLLQEGMVLTSYVKSIEDHG
         GL+G V   +  D   EK       E+P  DL  LP +F  G LV CVV  +D  K    K+ + LSL    + +  S + L+ GM+LT  V S+EDHG
Subjt:  GGLRGLVSAADAFDPILEK-----EIEDPEHDL--LPVMFHVGQLVPCVVLQVDDDKKESGKRKIWLSLRLSILYKDFSLDLLQEGMVLTSYVKSIEDHG

Query:  YILHFGLTSFTGFLPKTKQSD-----QPGNEVYVGQLLQCVVRSIDKTRKVVYFSSDQDIVSSSVTKDLKGISIDLLIPGMMVSARVQSTLENGILLSFL
        Y++  G++    FLP  K  +       G ++ VGQ L C++  +  +R VV  S     VS+++  + +  +++ L+PG++V A+VQ     G+ L FL
Subjt:  YILHFGLTSFTGFLPKTKQSD-----QPGNEVYVGQLLQCVVRSIDKTRKVVYFSSDQDIVSSSVTKDLKGISIDLLIPGMMVSARVQSTLENGILLSFL

Query:  TYFNGTVDMFHL
        ++F+G VD  HL
Subjt:  TYFNGTVDMFHL

F4J8K6 rRNA biogenesis protein RRP52.7e-10457.3Show/hide
Query:  KSQDGPKFNKHSKKPFKSKKKTSEIAKAEAISLQIEDDVPDFPRGGGGYLKPKRGEKVRAQGDKEFQNDD-LKMTTKRGKMRRKHPSNGDDLESLLNNGV
        K  D  K  K  KKPFK K K    A++EA++LQ+E DVPDFPRGGG  L  K  EK+  + D EF  D+ +   +K GK +++ PS+ DDL  L   G+
Subjt:  KSQDGPKFNKHSKKPFKSKKKTSEIAKAEAISLQIEDDVPDFPRGGGGYLKPKRGEKVRAQGDKEFQNDD-LKMTTKRGKMRRKHPSNGDDLESLLNNGV

Query:  VGNLPKYANKITLKNINPRMKFWGVVAEVNKKDLVISLPGGLRGLVSAADAFDPILEKEIEDPEHDLLPVMFHVGQLVPCVVLQVDDDKKESGKRKIWLS
         G  P+YANKIT KNI+P MK  GVV EVN+KD+VISLPGGLRGLV A++  D   ++ IED E++LL  +F VGQLVPC+VL++DDDKKE+GKRKIWLS
Subjt:  VGNLPKYANKITLKNINPRMKFWGVVAEVNKKDLVISLPGGLRGLVSAADAFDPILEKEIEDPEHDLLPVMFHVGQLVPCVVLQVDDDKKESGKRKIWLS

Query:  LRLSILYKDFSLDLLQEGMVLTSYVKSIEDHGYILHFGLTSFTGFLPKTKQSDQPGNEVYVGQLLQCVVRSIDKTRKVVYFSSDQDIVSSSVTKDLKGIS
        LRLS+L+K FS D  Q GMV ++ VKSIEDHG ILHFGL S TGF+  +   +Q    +  GQL+Q VV  ID+ RK+V+ SSD D V+  +TKDL G+S
Subjt:  LRLSILYKDFSLDLLQEGMVLTSYVKSIEDHGYILHFGLTSFTGFLPKTKQSDQPGNEVYVGQLLQCVVRSIDKTRKVVYFSSDQDIVSSSVTKDLKGIS

Query:  IDLLIPGMMVSARVQSTLENGILLSFLTYFNGTVDMFHLQNSFHSSNWKDYYNQNMKVSCGII
         DLLIPGMMV+ARVQS LENGIL  FLTYFNGTVD+FHL+N   + +WKD YNQN  V+  I+
Subjt:  IDLLIPGMMVSARVQSTLENGILLSFLTYFNGTVDMFHLQNSFHSSNWKDYYNQNMKVSCGII

O74835 rRNA biogenesis protein rrp54.2e-2027.61Show/hide
Query:  SLQIEDDVPDFPRGGGGYLKPKRGEKVRAQGDKEFQNDDLKMTTKRGKMRRKHPSNGDDLESLLNNGVVGNLPKYANKITLKNINPRMKFWGVVAEVNKK
        SL   +   DFPRGG   L P   ++   +  K+F            K R K   +    +S L+N    NL  +   +  KNI P     G +A++N  
Subjt:  SLQIEDDVPDFPRGGGGYLKPKRGEKVRAQGDKEFQNDDLKMTTKRGKMRRKHPSNGDDLESLLNNGVVGNLPKYANKITLKNINPRMKFWGVVAEVNKK

Query:  DLVISLPGGLRGLVSAADAFDPILEK--------------EIEDPEHDLLPVM--FHVGQLVPCVVLQV-DDDKKESGKRKIWLSLRLSILYKDF--SLD
        DL +SLP  L G V   +  D + ++              E ED  + +  +M  + VGQ V   V  +  ++  ++GKR I LSL+          + D
Subjt:  DLVISLPGGLRGLVSAADAFDPILEK--------------EIEDPEHDLLPVM--FHVGQLVPCVVLQV-DDDKKESGKRKIWLSLRLSILYKDF--SLD

Query:  LLQEGMVLTSYVKSIEDHGYILHFGLTSFTGFLPKTKQSDQPGNEVYVGQLLQCVVRSIDKTRKVVYFSSDQDIVSSSVTKDLKGI-SIDLLIPGMMVSA
         +  G ++ + V SIEDHG +   G+ ++TGFL K   +D P  E   GQ L C V  I K  ++ + S     ++++ TK L+ + S+  ++PG  ++ 
Subjt:  LLQEGMVLTSYVKSIEDHGYILHFGLTSFTGFLPKTKQSDQPGNEVYVGQLLQCVVRSIDKTRKVVYFSSDQDIVSSSVTKDLKGI-SIDLLIPGMMVSA

Query:  RVQSTLENGILLSFLTYFNGTVDMFH
         V    E+G++  ++   + T D++H
Subjt:  RVQSTLENGILLSFLTYFNGTVDMFH

Q14690 Protein RRP5 homolog5.6e-3332.9Show/hide
Query:  FPRGGGGYL-KPKRGEKVRAQGDKEFQNDDLKMTTKRGKMRRKHPSNGDDLESLLNNGVVGNLPKYANKITLKNINPRMKFWGVVAEVNKKDLVISLPGG
        FPRGG   + KP++  +   + D  F     + +TKR K  +K P+    L+            K+   ++++++   M+  G V EVN+ +LVISLP G
Subjt:  FPRGGGGYL-KPKRGEKVRAQGDKEFQNDDLKMTTKRGKMRRKHPSNGDDLESLLNNGVVGNLPKYANKITLKNINPRMKFWGVVAEVNKKDLVISLPGG

Query:  LRGLVSA---ADAFDPILEKEI--EDPEHDL--LPVMFHVGQLVPCVVLQVDDDKKESGKRKIWLSLRLSILYKDFSLDLLQEGMVLTSYVKSIEDHGYI
        L+G V      DA+   L +++  E P  DL  LP +F  G LV CVV  +     + GK+ + LSL    + +  S + L+ GM+LT  V S+EDHGY+
Subjt:  LRGLVSA---ADAFDPILEKEI--EDPEHDL--LPVMFHVGQLVPCVVLQVDDDKKESGKRKIWLSLRLSILYKDFSLDLLQEGMVLTSYVKSIEDHGYI

Query:  LHFGLTSFTGFLPKTKQSD-----QPGNEVYVGQLLQCVVRSIDKTRKVVYFSSDQDIVSSSVTKDLKGISIDLLIPGMMVSARVQSTLENGILLSFLTY
        +  G+     FLP  K  +       G ++ VGQ L C+V  +     VV  S     VS+++  + +  +++ L+PG++V A+VQ     G+ L+FLT+
Subjt:  LHFGLTSFTGFLPKTKQSD-----QPGNEVYVGQLLQCVVRSIDKTRKVVYFSSDQDIVSSSVTKDLKGISIDLLIPGMMVSARVQSTLENGILLSFLTY

Query:  FNGTVDMFHL
        F G VD  HL
Subjt:  FNGTVDMFHL

Q6NS46 Protein RRP5 homolog1.7e-3432.05Show/hide
Query:  FPRGGGGYLKPKRGEKVRAQGDKEFQNDDL-KMTTKRGKMRRKHPSNGDDLESLL---NNGVVGNLPKYANKITLKNINPRMKFWGVVAEVNKKDLVISL
        FPRGG      ++  K      +  + D+L  ++T+ G ++RK    G      L       + ++ +    ++L+++   M+  G V EV++ +LV+SL
Subjt:  FPRGGGGYLKPKRGEKVRAQGDKEFQNDDL-KMTTKRGKMRRKHPSNGDDLESLL---NNGVVGNLPKYANKITLKNINPRMKFWGVVAEVNKKDLVISL

Query:  PGGLRGLV---SAADAFDPILEKEI--EDPEHDL--LPVMFHVGQLVPCVVLQVDDDKKESGKRKIWLSLRLSILYKDFSLDLLQEGMVLTSYVKSIEDH
        P GL+G V      DA+   L +++  E+P  DL  LP +F  G LV CVV  +  D  ESGK+ + LS+    + K  S D L+ GM+LT  V S+EDH
Subjt:  PGGLRGLV---SAADAFDPILEKEI--EDPEHDL--LPVMFHVGQLVPCVVLQVDDDKKESGKRKIWLSLRLSILYKDFSLDLLQEGMVLTSYVKSIEDH

Query:  GYILHFGLTSFTGFLPKTKQSD-----QPGNEVYVGQLLQCVVRSIDKTRKVVYFSSDQDIVSSSVTKDLKGISIDLLIPGMMVSARVQSTLENGILLSF
        GY++  G+     FL   K  +       G +  VGQ L CVV  +     VV  S +   VSS+   + +  +++ L+PG++V A+VQ   + G+ L+F
Subjt:  GYILHFGLTSFTGFLPKTKQSD-----QPGNEVYVGQLLQCVVRSIDKTRKVVYFSSDQDIVSSSVTKDLKGISIDLLIPGMMVSARVQSTLENGILLSF

Query:  LTYFNGTVDMFHLQNSFHSSNWKDYYNQNMKVSCGII
        LT+F G VD  HL+     S     Y+ N  V   I+
Subjt:  LTYFNGTVDMFHLQNSFHSSNWKDYYNQNMKVSCGII

Arabidopsis top hitse value%identityAlignment
AT3G11964.1 RNA binding;RNA binding1.9e-10557.3Show/hide
Query:  KSQDGPKFNKHSKKPFKSKKKTSEIAKAEAISLQIEDDVPDFPRGGGGYLKPKRGEKVRAQGDKEFQNDD-LKMTTKRGKMRRKHPSNGDDLESLLNNGV
        K  D  K  K  KKPFK K K    A++EA++LQ+E DVPDFPRGGG  L  K  EK+  + D EF  D+ +   +K GK +++ PS+ DDL  L   G+
Subjt:  KSQDGPKFNKHSKKPFKSKKKTSEIAKAEAISLQIEDDVPDFPRGGGGYLKPKRGEKVRAQGDKEFQNDD-LKMTTKRGKMRRKHPSNGDDLESLLNNGV

Query:  VGNLPKYANKITLKNINPRMKFWGVVAEVNKKDLVISLPGGLRGLVSAADAFDPILEKEIEDPEHDLLPVMFHVGQLVPCVVLQVDDDKKESGKRKIWLS
         G  P+YANKIT KNI+P MK  GVV EVN+KD+VISLPGGLRGLV A++  D   ++ IED E++LL  +F VGQLVPC+VL++DDDKKE+GKRKIWLS
Subjt:  VGNLPKYANKITLKNINPRMKFWGVVAEVNKKDLVISLPGGLRGLVSAADAFDPILEKEIEDPEHDLLPVMFHVGQLVPCVVLQVDDDKKESGKRKIWLS

Query:  LRLSILYKDFSLDLLQEGMVLTSYVKSIEDHGYILHFGLTSFTGFLPKTKQSDQPGNEVYVGQLLQCVVRSIDKTRKVVYFSSDQDIVSSSVTKDLKGIS
        LRLS+L+K FS D  Q GMV ++ VKSIEDHG ILHFGL S TGF+  +   +Q    +  GQL+Q VV  ID+ RK+V+ SSD D V+  +TKDL G+S
Subjt:  LRLSILYKDFSLDLLQEGMVLTSYVKSIEDHGYILHFGLTSFTGFLPKTKQSDQPGNEVYVGQLLQCVVRSIDKTRKVVYFSSDQDIVSSSVTKDLKGIS

Query:  IDLLIPGMMVSARVQSTLENGILLSFLTYFNGTVDMFHLQNSFHSSNWKDYYNQNMKVSCGII
         DLLIPGMMV+ARVQS LENGIL  FLTYFNGTVD+FHL+N   + +WKD YNQN  V+  I+
Subjt:  IDLLIPGMMVSARVQSTLENGILLSFLTYFNGTVDMFHLQNSFHSSNWKDYYNQNMKVSCGII


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCGCCTTCAAGAAAATCACAGGATGGCCCAAAGTTCAATAAGCATTCCAAGAAACCATTCAAGTCGAAGAAGAAAACGAGTGAAATAGCTAAAGCCGAAGCTAT
ATCGTTGCAGATTGAAGATGATGTTCCTGACTTTCCTAGAGGTGGAGGAGGTTATTTAAAACCAAAAAGGGGGGAAAAAGTACGTGCCCAAGGAGATAAGGAGTTTCAGA
ATGATGATCTGAAGATGACAACAAAAAGAGGAAAGATGAGAAGAAAGCATCCGTCAAACGGGGATGATTTGGAATCCTTGTTGAACAATGGTGTAGTGGGAAACCTTCCT
AAATATGCAAATAAGATAACTTTGAAGAATATAAATCCAAGAATGAAATTTTGGGGAGTTGTTGCTGAAGTTAATAAGAAGGATCTTGTTATTAGTCTACCGGGGGGCTT
ACGCGGATTAGTGTCTGCTGCTGATGCTTTTGATCCAATTTTGGAAAAAGAAATCGAGGATCCAGAGCATGATTTGCTTCCTGTCATGTTCCATGTTGGGCAACTGGTTC
CATGTGTTGTGCTGCAAGTGGATGATGACAAGAAAGAATCAGGGAAGAGAAAGATCTGGCTTTCATTACGTTTATCTATATTGTACAAAGACTTCTCATTGGACCTTCTT
CAAGAAGGAATGGTTCTAACATCATATGTGAAAAGCATTGAAGATCATGGCTACATTCTTCATTTTGGTTTGACTTCCTTCACTGGATTTTTGCCAAAGACCAAACAATC
TGATCAACCTGGGAATGAAGTGTATGTTGGGCAACTTCTTCAATGTGTTGTTAGAAGCATTGACAAAACTCGTAAAGTGGTTTATTTTAGTTCTGATCAAGATATTGTGT
CCAGCAGTGTGACGAAGGATCTAAAAGGTATTTCAATTGACCTTCTCATCCCTGGCATGATGGTTAGCGCACGAGTACAATCAACCCTTGAAAACGGGATCTTGCTATCC
TTTCTCACTTATTTTAATGGAACTGTTGATATGTTTCACTTACAAAATAGTTTTCATTCTTCAAATTGGAAAGATTATTACAACCAGAACATGAAGGTATCGTGTGGAAT
TATTCACTACTTTATATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCCGCCTTCAAGAAAATCACAGGATGGCCCAAAGTTCAATAAGCATTCCAAGAAACCATTCAAGTCGAAGAAGAAAACGAGTGAAATAGCTAAAGCCGAAGCTAT
ATCGTTGCAGATTGAAGATGATGTTCCTGACTTTCCTAGAGGTGGAGGAGGTTATTTAAAACCAAAAAGGGGGGAAAAAGTACGTGCCCAAGGAGATAAGGAGTTTCAGA
ATGATGATCTGAAGATGACAACAAAAAGAGGAAAGATGAGAAGAAAGCATCCGTCAAACGGGGATGATTTGGAATCCTTGTTGAACAATGGTGTAGTGGGAAACCTTCCT
AAATATGCAAATAAGATAACTTTGAAGAATATAAATCCAAGAATGAAATTTTGGGGAGTTGTTGCTGAAGTTAATAAGAAGGATCTTGTTATTAGTCTACCGGGGGGCTT
ACGCGGATTAGTGTCTGCTGCTGATGCTTTTGATCCAATTTTGGAAAAAGAAATCGAGGATCCAGAGCATGATTTGCTTCCTGTCATGTTCCATGTTGGGCAACTGGTTC
CATGTGTTGTGCTGCAAGTGGATGATGACAAGAAAGAATCAGGGAAGAGAAAGATCTGGCTTTCATTACGTTTATCTATATTGTACAAAGACTTCTCATTGGACCTTCTT
CAAGAAGGAATGGTTCTAACATCATATGTGAAAAGCATTGAAGATCATGGCTACATTCTTCATTTTGGTTTGACTTCCTTCACTGGATTTTTGCCAAAGACCAAACAATC
TGATCAACCTGGGAATGAAGTGTATGTTGGGCAACTTCTTCAATGTGTTGTTAGAAGCATTGACAAAACTCGTAAAGTGGTTTATTTTAGTTCTGATCAAGATATTGTGT
CCAGCAGTGTGACGAAGGATCTAAAAGGTATTTCAATTGACCTTCTCATCCCTGGCATGATGGTTAGCGCACGAGTACAATCAACCCTTGAAAACGGGATCTTGCTATCC
TTTCTCACTTATTTTAATGGAACTGTTGATATGTTTCACTTACAAAATAGTTTTCATTCTTCAAATTGGAAAGATTATTACAACCAGAACATGAAGGTATCGTGTGGAAT
TATTCACTACTTTATATAA
Protein sequenceShow/hide protein sequence
MAPPSRKSQDGPKFNKHSKKPFKSKKKTSEIAKAEAISLQIEDDVPDFPRGGGGYLKPKRGEKVRAQGDKEFQNDDLKMTTKRGKMRRKHPSNGDDLESLLNNGVVGNLP
KYANKITLKNINPRMKFWGVVAEVNKKDLVISLPGGLRGLVSAADAFDPILEKEIEDPEHDLLPVMFHVGQLVPCVVLQVDDDKKESGKRKIWLSLRLSILYKDFSLDLL
QEGMVLTSYVKSIEDHGYILHFGLTSFTGFLPKTKQSDQPGNEVYVGQLLQCVVRSIDKTRKVVYFSSDQDIVSSSVTKDLKGISIDLLIPGMMVSARVQSTLENGILLS
FLTYFNGTVDMFHLQNSFHSSNWKDYYNQNMKVSCGIIHYFI