CuGenDBv2

Gene ID	HG10017893
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	60S ribosomal protein L35a-1-like
Genome location	Chr03:25399614..25400046
RNA-Seq Expression	HG10017893
Synteny	HG10017893
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0015031 - protein transport (biological process) GO:0005789 - endoplasmic reticulum membrane (cellular component) GO:0005829 - cytosol (cellular component) GO:0005840 - ribosome (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR001780 - Ribosomal protein L35A IPR009000 - Translation protein, beta-barrel domain superfamily IPR018266 - Ribosomal protein L35Ae, conserved site IPR038661 - Ribosomal protein L35A superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

TYK16037.1 60S ribosomal protein L35a-1-like [Cucumis melo var. makuwa]

7.7e-37

100

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Query:  RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSM
        RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSM
Subjt:  RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSM

XP_008442180.1 PREDICTED: 60S ribosomal protein L35a-1-like [Cucumis melo]

7.7e-37

100

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Query:  RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSM
        RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSM
Subjt:  RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSM

XP_011653915.1 60S ribosomal protein L35a-1 [Cucumis sativus]

7.7e-37

100

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Query:  RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSM
        RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSM
Subjt:  RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSM

XP_022967923.1 60S ribosomal protein L35a-1-like [Cucurbita maxima]

1.7e-36

98.7

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Query:  RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSM
        RSKSNQYPRTSLIQIEGVNT+EEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSM
Subjt:  RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSM

XP_038883794.1 60S ribosomal protein L35a-1-like [Benincasa hispida]

7.7e-37

100

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Query:  RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSM
        RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSM
Subjt:  RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSM

TrEMBL top hits

e value

%identity

Alignment

A0A1S3B4N4 60S ribosomal protein L35a-1-like

3.7e-37

100

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Query:  RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSM
        RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSM
Subjt:  RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSM

A0A5A7TGR3 60S ribosomal protein L35a-1-like

3.7e-37

100

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Query:  RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSM
        RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSM
Subjt:  RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSM

A0A5D3CVU3 60S ribosomal protein L35a-1-like

3.7e-37

100

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Query:  RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSM
        RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSM
Subjt:  RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSM

A0A6J1EL43 60S ribosomal protein L35a-1-like

8.3e-37

98.7

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Query:  RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSM
        RSKSNQYPRTSLIQIEGVNT+EEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSM
Subjt:  RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSM

A0A6J1HTF7 60S ribosomal protein L35a-1-like

8.3e-37

98.7

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Query:  RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSM
        RSKSNQYPRTSLIQIEGVNT+EEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSM
Subjt:  RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSM

SwissProt top hits

e value

%identity

Alignment

P51422 60S ribosomal protein L35a-4

2.2e-34

84.42

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Query:  RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSM
        RSKSNQYP TSL+QIEGVNT+EEV WY GKRLAYIYKAK K+NG+HYRCIWGKV+RPHGNSG+VR+KF SNLPPKSM
Subjt:  RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSM

Q9C912 60S ribosomal protein L35a-3

1.7e-34

84.42

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Query:  RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSM
        RSKSNQYP TSL+QIEGVNT+EEV WY GKR+AYIYKAK K+NG+HYRCIWGKV+RPHGNSG+VRAKF SNLPPKSM
Subjt:  RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSM

Q9FZH0 60S ribosomal protein L35a-2

1.7e-34

85.71

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Query:  RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSM
        RSKSNQYP TSLIQIEGVNT+EEV WY GKRLAYIYKAK K+NG+HYRCIWGKV+RPHGNSG+VR+KF SNLPPKSM
Subjt:  RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSM

Q9LMK0 60S ribosomal protein L35a-1

1.7e-34

83.12

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Query:  RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSM
        RSKSNQYP TSL+Q+EGVNT EEV+WY GKR+AYIYKAK K+NG+HYRCIWGKV+RPHGNSG+VRAKF SNLPPKSM
Subjt:  RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSM

Q9USX4 60S ribosomal protein L33-A

2.2e-18

53.95

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Query:  RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKS
        RSK   +P TSL++IEG +++EE  +Y GKR+ ++YK+     G+  R IWG VSRPHGNSG+VRA+F  NLPPK+
Subjt:  RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKS

Arabidopsis top hits

e value

%identity

Alignment

AT1G07070.1 Ribosomal protein L35Ae family protein

1.2e-35

83.12

Show/hide

Query:  RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSM
        RSKSNQYP TSL+Q+EGVNT EEV+WY GKR+AYIYKAK K+NG+HYRCIWGKV+RPHGNSG+VRAKF SNLPPKSM
Subjt:  RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSM

AT1G41880.1 Ribosomal protein L35Ae family protein

1.2e-35

85.71

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Query:  RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSM
        RSKSNQYP TSLIQIEGVNT+EEV WY GKRLAYIYKAK K+NG+HYRCIWGKV+RPHGNSG+VR+KF SNLPPKSM
Subjt:  RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSM

AT1G74270.1 Ribosomal protein L35Ae family protein

1.2e-35

84.42

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Query:  RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSM
        RSKSNQYP TSL+QIEGVNT+EEV WY GKR+AYIYKAK K+NG+HYRCIWGKV+RPHGNSG+VRAKF SNLPPKSM
Subjt:  RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSM

AT3G55750.1 Ribosomal protein L35Ae family protein

1.5e-35

84.42

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Query:  RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSM
        RSKSNQYP TSL+QIEGVNT+EEV WY GKRLAYIYKAK K+NG+HYRCIWGKV+RPHGNSG+VR+KF SNLPPKSM
Subjt:  RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSM

Sequences

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CDS sequence

Show/hide CDS sequence

ATGAATGCTACGTATCTGGTTATAGTTAGGAAAACAGAAAATGATGCAAAAGGGTTTAGTGATAAATTACTGAGGGATGATATAATTTGTGCGGGAGCTAAGAATGTGAA
ATTGGTGTTTAGATCGAAGTCAAACCAGTATCCAAGAACATCGCTGATCCAAATTGAAGGGGTGAACACCAGGGAAGAGGTCGCATGGTATGCTGGAAAGCGCTTGGCAT
ACATTTACAAGGCCAAAGTGAAGCAAAATGGAACTCACTACCGATGCATTTGGGGCAAGGTTTCCAGGCCTCATGGTAACAGTGGCATTGTTCGAGCTAAGTTCAAGTCT
AACTTGCCCCCAAAATCCATGGTAATGTGTAATGAGTAG

mRNA sequence

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Protein sequence

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MNATYLVIVRKTENDAKGFSDKLLRDDIICAGAKNVKLVFRSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKS
NLPPKSMVMCNE

HG10017893 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome