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HG10017911 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10017911
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionMuDRA-like transposase
Genome locationChr03:25878359..25878814
RNA-Seq ExpressionHG10017911
SyntenyHG10017911
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR006564 - Zinc finger, PMZ-type
IPR007527 - Zinc finger, SWIM-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038887233.1 uncharacterized protein LOC120077423 [Benincasa hispida]6.5e-5471.33Show/hide
Query:  VHVRDNRLDGIVNLHTQECMCKEFEALGIPCSHAIVAAREHNIPIERLCSRFYTVESLMTAYAKPVNPLGHMSEWTKPADYVEQNILPPKRIAQVGRQRV
        VHVRDNRLDGIVNLHT+EC CKEF++LGIPCSHAIVA +E NIPI+ LCSRFYTV+SLMT YA+P+NPLGH+ EW +   YVE+ ILPPK +AQVGR RV
Subjt:  VHVRDNRLDGIVNLHTQECMCKEFEALGIPCSHAIVAAREHNIPIERLCSRFYTVESLMTAYAKPVNPLGHMSEWTKPADYVEQNILPPKRIAQVGRQRV

Query:  RRIPSRGEHPKLIKNERCGNYGHNRQNCNEPLTTRRLAEDSEN
        RRIPSRGE  + +K  RCGNYGHNRQNC+E LTT R  +++ N
Subjt:  RRIPSRGEHPKLIKNERCGNYGHNRQNCNEPLTTRRLAEDSEN

XP_038891632.1 uncharacterized protein LOC120081024 [Benincasa hispida]1.2e-5573.43Show/hide
Query:  VHVRDNRLDGIVNLHTQECMCKEFEALGIPCSHAIVAAREHNIPIERLCSRFYTVESLMTAYAKPVNPLGHMSEWTKPADYVEQNILPPKRIAQVGRQRV
        VHVR+NRLDGI+NLHT+EC CKEFE+LGIPCSHAIVAARE NIPI  LCSRFYTV+SLMTAYA+P+NPLGH+SEW +P+ YVE+ ILPPK + Q GR+RV
Subjt:  VHVRDNRLDGIVNLHTQECMCKEFEALGIPCSHAIVAAREHNIPIERLCSRFYTVESLMTAYAKPVNPLGHMSEWTKPADYVEQNILPPKRIAQVGRQRV

Query:  RRIPSRGEHPKLIKNERCGNYGHNRQNCNEPLTTRRLAEDSEN
        RRIPSRGE  + +K  RCGNYGHN QNC EPLTT R A++S +
Subjt:  RRIPSRGEHPKLIKNERCGNYGHNRQNCNEPLTTRRLAEDSEN

XP_038896508.1 uncharacterized protein LOC120084759 [Benincasa hispida]7.0e-5672.73Show/hide
Query:  VHVRDNRLDGIVNLHTQECMCKEFEALGIPCSHAIVAAREHNIPIERLCSRFYTVESLMTAYAKPVNPLGHMSEWTKPADYVEQNILPPKRIAQVGRQRV
        VHVRDNRLD IVNLHT+ECMCKEF++LGIPCSHAIVAA+E NIPI  LCSRFYTV+SLMTAYA+P+NPLGH+SEW +P+ Y+E+ ILPPK + Q GR RV
Subjt:  VHVRDNRLDGIVNLHTQECMCKEFEALGIPCSHAIVAAREHNIPIERLCSRFYTVESLMTAYAKPVNPLGHMSEWTKPADYVEQNILPPKRIAQVGRQRV

Query:  RRIPSRGEHPKLIKNERCGNYGHNRQNCNEPLTTRRLAEDSEN
        RRIPSRGE  + +K  RCGNYGHNRQNC EPLTT R  E++ +
Subjt:  RRIPSRGEHPKLIKNERCGNYGHNRQNCNEPLTTRRLAEDSEN

XP_038902455.1 uncharacterized protein LOC120089103 [Benincasa hispida]1.6e-5269.23Show/hide
Query:  VHVRDNRLDGIVNLHTQECMCKEFEALGIPCSHAIVAAREHNIPIERLCSRFYTVESLMTAYAKPVNPLGHMSEWTKPADYVEQNILPPKRIAQVGRQRV
        VHV+DNRLD I+NLHT+EC CKEF +LGIPC HAI AA+E NIPI  LCSRFY V+SLMTAYA+P+NPLGH+SEW +P+ YVE+ ILP K + QVGR+RV
Subjt:  VHVRDNRLDGIVNLHTQECMCKEFEALGIPCSHAIVAAREHNIPIERLCSRFYTVESLMTAYAKPVNPLGHMSEWTKPADYVEQNILPPKRIAQVGRQRV

Query:  RRIPSRGEHPKLIKNERCGNYGHNRQNCNEPLTTRRLAEDSEN
        RRIPSRGE  + +K   CGNYGHNRQNC EPLTT R AE++++
Subjt:  RRIPSRGEHPKLIKNERCGNYGHNRQNCNEPLTTRRLAEDSEN

XP_038904501.1 uncharacterized protein LOC120090874 [Benincasa hispida]2.1e-5269.39Show/hide
Query:  VHVRDNRLDGIVNLHTQECMCKEFEALGIPCSHAIVAAREHNIPIERLCSRFYTVESLMTAYAKPVNPLGHMSEWTKPADYVEQNILPPKRIAQVGRQRV
        VHVRDNRLD IVNLHT+EC CKEF+++GI CSHAIVA +E NIPI  LCSRFYTV+SLMTAYA+P+NPLGH+SEW +   YVE+ ILPP  +AQVGR RV
Subjt:  VHVRDNRLDGIVNLHTQECMCKEFEALGIPCSHAIVAAREHNIPIERLCSRFYTVESLMTAYAKPVNPLGHMSEWTKPADYVEQNILPPKRIAQVGRQRV

Query:  RRIPSRGEHPKLIKNERCGNYGHNRQNCNEPLTTRRLAEDSENVCNV
        RRIPSRGE  K +K +RCGNYGHN QNC++PLTT R  E  E V  +
Subjt:  RRIPSRGEHPKLIKNERCGNYGHNRQNCNEPLTTRRLAEDSENVCNV

TrEMBL top hitse value%identityAlignment
A0A2I7YUI4 MuDRA-like transposase9.9e-3249.24Show/hide
Query:  HVRDNRLDGIVNLHTQECMCKEFEALGIPCSHAIVAAREHNIPIERLCSRFYTVESLMTAYAKPVNPLGHMSEWTKPADYVEQNILPPKRIAQVGRQRVR
        HV+D   + ++NLHTQEC CKEF+A  +PC+HAI  AR+ NI +  LC+ +YT E L+ AY++ V P+G+ SEW    +YV   +LPPK + +VGR + +
Subjt:  HVRDNRLDGIVNLHTQECMCKEFEALGIPCSHAIVAAREHNIPIERLCSRFYTVESLMTAYAKPVNPLGHMSEWTKPADYVEQNILPPKRIAQVGRQRVR

Query:  RIPSRGEHPKLIKNERCGNYGHNRQNCNEPLT
        RIPS GE PKL K  RC   GHNR  C  P++
Subjt:  RIPSRGEHPKLIKNERCGNYGHNRQNCNEPLT

A0A5A7SYY7 MuDRA-like transposase1.3e-3150Show/hide
Query:  HVRDNRLDGIVNLHTQECMCKEFEALGIPCSHAIVAAREHNIPIERLCSRFYTVESLMTAYAKPVNPLGHMSEWTKPADYVEQNILPPKRIAQVGRQRVR
        HV+D   + +VNL T+EC CKEF+A  +PCSHAI AAR+ NI +  LC+ +YT E L+ AYA+ V P+G+ S+W    DY+   +LPPK + +VGR + +
Subjt:  HVRDNRLDGIVNLHTQECMCKEFEALGIPCSHAIVAAREHNIPIERLCSRFYTVESLMTAYAKPVNPLGHMSEWTKPADYVEQNILPPKRIAQVGRQRVR

Query:  RIPSRGEHPKLIKNERCGNYGHNRQNCNEPLT
        RIPS GE PKL K  RC   GHNR  C  P++
Subjt:  RIPSRGEHPKLIKNERCGNYGHNRQNCNEPLT

A0A5A7TC30 MuDRA-like transposase7.6e-3250.76Show/hide
Query:  HVRDNRLDGIVNLHTQECMCKEFEALGIPCSHAIVAAREHNIPIERLCSRFYTVESLMTAYAKPVNPLGHMSEWTKPADYVEQNILPPKRIAQVGRQRVR
        HV+D   + +VNL T+EC CKEF+A  +PCSHAI AAR+ NI +  LC+ +YT E L+ AYA+ V P+G+ S+W    DYV   +LPPK + +VGR + +
Subjt:  HVRDNRLDGIVNLHTQECMCKEFEALGIPCSHAIVAAREHNIPIERLCSRFYTVESLMTAYAKPVNPLGHMSEWTKPADYVEQNILPPKRIAQVGRQRVR

Query:  RIPSRGEHPKLIKNERCGNYGHNRQNCNEPLT
        RIPS GE PKL K  RC   GHNR  C  P++
Subjt:  RIPSRGEHPKLIKNERCGNYGHNRQNCNEPLT

A0A5A7U821 MuDRA-like transposase1.7e-3150Show/hide
Query:  HVRDNRLDGIVNLHTQECMCKEFEALGIPCSHAIVAAREHNIPIERLCSRFYTVESLMTAYAKPVNPLGHMSEWTKPADYVEQNILPPKRIAQVGRQRVR
        HV+D   + +VNL T+EC+CKEF+A  +PCSH I AAR+ NI +  LC+ +YT E L+ AYA+ V P+G+ S+W    DYV   +LPPK + +VGR + +
Subjt:  HVRDNRLDGIVNLHTQECMCKEFEALGIPCSHAIVAAREHNIPIERLCSRFYTVESLMTAYAKPVNPLGHMSEWTKPADYVEQNILPPKRIAQVGRQRVR

Query:  RIPSRGEHPKLIKNERCGNYGHNRQNCNEPLT
        RIPS GE PKL K  RC   GHNR  C  P++
Subjt:  RIPSRGEHPKLIKNERCGNYGHNRQNCNEPLT

A0A5A7UML9 MuDRA-like transposase5.8e-3250Show/hide
Query:  HVRDNRLDGIVNLHTQECMCKEFEALGIPCSHAIVAAREHNIPIERLCSRFYTVESLMTAYAKPVNPLGHMSEWTKPADYVEQNILPPKRIAQVGRQRVR
        HV+D   + +VNL T+EC CKEF+A  +PCSHAI AAR+ NI +  LC+ +YT E L+ AYA+ + P+G+ S+W    DYV   +LPPK + +VGR + +
Subjt:  HVRDNRLDGIVNLHTQECMCKEFEALGIPCSHAIVAAREHNIPIERLCSRFYTVESLMTAYAKPVNPLGHMSEWTKPADYVEQNILPPKRIAQVGRQRVR

Query:  RIPSRGEHPKLIKNERCGNYGHNRQNCNEPLT
        RIPS GE PKL K  RC   GHNR  C  P++
Subjt:  RIPSRGEHPKLIKNERCGNYGHNRQNCNEPLT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCCATGTGAGGGATAACCGATTAGACGGTATTGTCAACCTTCACACACAGGAATGCATGTGTAAAGAGTTTGAGGCACTTGGTATCCCATGTTCTCACGCA
ATCGTGGCGGCCCGAGAACATAATATCCCCATCGAGCGTCTTTGTAGTCGATTTTATACCGTTGAATCCCTCATGACTGCGTACGCGAAGCCGGTTAATCCACTT
GGACATATGTCTGAATGGACGAAACCAGCTGACTATGTTGAACAAAATATCCTTCCTCCAAAGAGAATTGCCCAAGTAGGTCGACAAAGAGTACGACGAATACCA
TCTAGAGGAGAACATCCCAAACTGATAAAAAATGAAAGGTGTGGTAATTATGGTCATAACCGACAAAACTGTAACGAACCGCTTACAACCAGAAGACTTGCTGAA
GACAGTGAAAATGTGTGCAACGTTACCTGTACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTCCATGTGAGGGATAACCGATTAGACGGTATTGTCAACCTTCACACACAGGAATGCATGTGTAAAGAGTTTGAGGCACTTGGTATCCCATGTTCTCACGCA
ATCGTGGCGGCCCGAGAACATAATATCCCCATCGAGCGTCTTTGTAGTCGATTTTATACCGTTGAATCCCTCATGACTGCGTACGCGAAGCCGGTTAATCCACTT
GGACATATGTCTGAATGGACGAAACCAGCTGACTATGTTGAACAAAATATCCTTCCTCCAAAGAGAATTGCCCAAGTAGGTCGACAAAGAGTACGACGAATACCA
TCTAGAGGAGAACATCCCAAACTGATAAAAAATGAAAGGTGTGGTAATTATGGTCATAACCGACAAAACTGTAACGAACCGCTTACAACCAGAAGACTTGCTGAA
GACAGTGAAAATGTGTGCAACGTTACCTGTACTTGA
Protein sequenceShow/hide protein sequence
MVHVRDNRLDGIVNLHTQECMCKEFEALGIPCSHAIVAAREHNIPIERLCSRFYTVESLMTAYAKPVNPLGHMSEWTKPADYVEQNILPPKRIAQVGRQRVRRIP
SRGEHPKLIKNERCGNYGHNRQNCNEPLTTRRLAEDSENVCNVTCT