; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10017921 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10017921
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionCBS domain-containing protein CBSCBSPB3
Genome locationChr03:26062516..26072490
RNA-Seq ExpressionHG10017921
SyntenyHG10017921
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041315.1 CBS domain-containing protein CBSCBSPB3 [Cucumis melo var. makuwa]1.4e-2772.9Show/hide
Query:  MTTQLVPPRRRNSLTQKHAPSTSNRKLVSADNGSTSNGNVPKPGSLPQL------SKDSEKLRLLKAHTIPEGTTVSEACRRMAARRVDVVLLTDANALL
        MTTQL PP R+N L QK   STS+RK VS DNG++SNGNVPKPGS PQL       +  +KLRL KA TIPEGTTVSEACRRMAARRVD VLLTDANALL
Subjt:  MTTQLVPPRRRNSLTQKHAPSTSNRKLVSADNGSTSNGNVPKPGSLPQL------SKDSEKLRLLKAHTIPEGTTVSEACRRMAARRVDVVLLTDANALL

Query:  LGILTDK
         GILTDK
Subjt:  LGILTDK

TYK02779.1 CBS domain-containing protein CBSCBSPB3 [Cucumis melo var. makuwa]2.1e-2671.96Show/hide
Query:  MTTQLVPPRRRNSLTQKHAPSTSNRKLVSADNGSTSNGNVPKPGSLPQL------SKDSEKLRLLKAHTIPEGTTVSEACRRMAARRVDVVLLTDANALL
        MTTQL PP R+N L QK   STS+RK VS DNG++SNGNV KPGS PQL       +  +KLRL KA TIPEGTTVSEACRRMAARRVD VLLTDANALL
Subjt:  MTTQLVPPRRRNSLTQKHAPSTSNRKLVSADNGSTSNGNVPKPGSLPQL------SKDSEKLRLLKAHTIPEGTTVSEACRRMAARRVDVVLLTDANALL

Query:  LGILTDK
         GILTDK
Subjt:  LGILTDK

XP_004146397.1 CBS domain-containing protein CBSCBSPB3 [Cucumis sativus]9.3e-2772.9Show/hide
Query:  MTTQLVPPRRRNSLTQKHAPSTSNRKLVSADNGSTSNGNVPKPGSLPQL------SKDSEKLRLLKAHTIPEGTTVSEACRRMAARRVDVVLLTDANALL
        MTTQL PP RR+SL QK   STS+RK VS DNG +SNGNVPKPGS  QL       +  +KLRL KA TIPEGTTVSEACRRMAARRVD VLLTDANALL
Subjt:  MTTQLVPPRRRNSLTQKHAPSTSNRKLVSADNGSTSNGNVPKPGSLPQL------SKDSEKLRLLKAHTIPEGTTVSEACRRMAARRVDVVLLTDANALL

Query:  LGILTDK
         GILTDK
Subjt:  LGILTDK

XP_008442154.1 PREDICTED: CBS domain-containing protein CBSCBSPB3 [Cucumis melo]2.1e-2671.96Show/hide
Query:  MTTQLVPPRRRNSLTQKHAPSTSNRKLVSADNGSTSNGNVPKPGSLPQL------SKDSEKLRLLKAHTIPEGTTVSEACRRMAARRVDVVLLTDANALL
        MTTQL PP R+N L QK   STS+RK VS DNG++SNGNV KPGS PQL       +  +KLRL KA TIPEGTTVSEACRRMAARRVD VLLTDANALL
Subjt:  MTTQLVPPRRRNSLTQKHAPSTSNRKLVSADNGSTSNGNVPKPGSLPQL------SKDSEKLRLLKAHTIPEGTTVSEACRRMAARRVDVVLLTDANALL

Query:  LGILTDK
         GILTDK
Subjt:  LGILTDK

XP_038881897.1 CBS domain-containing protein CBSCBSPB3-like [Benincasa hispida]2.4e-3076.64Show/hide
Query:  MTTQLVPPRRRNSLTQKHAPSTSNRKLVSADNGSTSNGNVPKPGSLPQLS------KDSEKLRLLKAHTIPEGTTVSEACRRMAARRVDVVLLTDANALL
        MTTQLVP  RRNSL QK APSTS RK V+ADNG+TSNGNVPKP S PQL+      +  +KLRL KA TIPEGTTVSEACRRMAARRVD VLLTDANALL
Subjt:  MTTQLVPPRRRNSLTQKHAPSTSNRKLVSADNGSTSNGNVPKPGSLPQLS------KDSEKLRLLKAHTIPEGTTVSEACRRMAARRVDVVLLTDANALL

Query:  LGILTDK
         GILTDK
Subjt:  LGILTDK

TrEMBL top hitse value%identityAlignment
A0A0A0KYM2 Uncharacterized protein4.5e-2772.9Show/hide
Query:  MTTQLVPPRRRNSLTQKHAPSTSNRKLVSADNGSTSNGNVPKPGSLPQL------SKDSEKLRLLKAHTIPEGTTVSEACRRMAARRVDVVLLTDANALL
        MTTQL PP RR+SL QK   STS+RK VS DNG +SNGNVPKPGS  QL       +  +KLRL KA TIPEGTTVSEACRRMAARRVD VLLTDANALL
Subjt:  MTTQLVPPRRRNSLTQKHAPSTSNRKLVSADNGSTSNGNVPKPGSLPQL------SKDSEKLRLLKAHTIPEGTTVSEACRRMAARRVDVVLLTDANALL

Query:  LGILTDK
         GILTDK
Subjt:  LGILTDK

A0A1S3B5Q1 CBS domain-containing protein CBSCBSPB31.0e-2671.96Show/hide
Query:  MTTQLVPPRRRNSLTQKHAPSTSNRKLVSADNGSTSNGNVPKPGSLPQL------SKDSEKLRLLKAHTIPEGTTVSEACRRMAARRVDVVLLTDANALL
        MTTQL PP R+N L QK   STS+RK VS DNG++SNGNV KPGS PQL       +  +KLRL KA TIPEGTTVSEACRRMAARRVD VLLTDANALL
Subjt:  MTTQLVPPRRRNSLTQKHAPSTSNRKLVSADNGSTSNGNVPKPGSLPQL------SKDSEKLRLLKAHTIPEGTTVSEACRRMAARRVDVVLLTDANALL

Query:  LGILTDK
         GILTDK
Subjt:  LGILTDK

A0A5A7TIR6 CBS domain-containing protein CBSCBSPB36.9e-2872.9Show/hide
Query:  MTTQLVPPRRRNSLTQKHAPSTSNRKLVSADNGSTSNGNVPKPGSLPQL------SKDSEKLRLLKAHTIPEGTTVSEACRRMAARRVDVVLLTDANALL
        MTTQL PP R+N L QK   STS+RK VS DNG++SNGNVPKPGS PQL       +  +KLRL KA TIPEGTTVSEACRRMAARRVD VLLTDANALL
Subjt:  MTTQLVPPRRRNSLTQKHAPSTSNRKLVSADNGSTSNGNVPKPGSLPQL------SKDSEKLRLLKAHTIPEGTTVSEACRRMAARRVDVVLLTDANALL

Query:  LGILTDK
         GILTDK
Subjt:  LGILTDK

A0A5D3BXA7 CBS domain-containing protein CBSCBSPB31.0e-2671.96Show/hide
Query:  MTTQLVPPRRRNSLTQKHAPSTSNRKLVSADNGSTSNGNVPKPGSLPQL------SKDSEKLRLLKAHTIPEGTTVSEACRRMAARRVDVVLLTDANALL
        MTTQL PP R+N L QK   STS+RK VS DNG++SNGNV KPGS PQL       +  +KLRL KA TIPEGTTVSEACRRMAARRVD VLLTDANALL
Subjt:  MTTQLVPPRRRNSLTQKHAPSTSNRKLVSADNGSTSNGNVPKPGSLPQL------SKDSEKLRLLKAHTIPEGTTVSEACRRMAARRVDVVLLTDANALL

Query:  LGILTDK
         GILTDK
Subjt:  LGILTDK

A0A6J1HMI4 CBS domain-containing protein CBSCBSPB31.7e-2671.56Show/hide
Query:  MTTQLV--PPRRRNSLTQKHAPSTSNRKLVSADNGSTSNGNVPKPGSLPQL------SKDSEKLRLLKAHTIPEGTTVSEACRRMAARRVDVVLLTDANA
        M+TQL     +RRNS TQK A S S+RK VSADNGS SNGNVPKPGS PQL       +  +KLRL KA TIPEGTTVSEACRRMAARRVD VLLTDANA
Subjt:  MTTQLV--PPRRRNSLTQKHAPSTSNRKLVSADNGSTSNGNVPKPGSLPQL------SKDSEKLRLLKAHTIPEGTTVSEACRRMAARRVDVVLLTDANA

Query:  LLLGILTDK
        +L GILTDK
Subjt:  LLLGILTDK

SwissProt top hitse value%identityAlignment
P0DH79 CBS domain-containing protein CBSCBSPB55.1e-1251.25Show/hide
Query:  EKLRLLKAHTIPEGTTVSEACRRMAARRVDVVLLTDANALLLGILTDKTFDIYTHETISKRSLKGNEIPNMEVIFNDTIY
        ++LRL KA T+P+ TT+ EACRRMAARRVD +LLTD+NALL GILTD+  DI T   +  + L   E P  +V+  + ++
Subjt:  EKLRLLKAHTIPEGTTVSEACRRMAARRVDVVLLTDANALLLGILTDKTFDIYTHETISKRSLKGNEIPNMEVIFNDTIY

Q0WLC7 CBS domain-containing protein CBSCBSPB45.1e-1251.25Show/hide
Query:  EKLRLLKAHTIPEGTTVSEACRRMAARRVDVVLLTDANALLLGILTDKTFDIYTHETISKRSLKGNEIPNMEVIFNDTIY
        ++LRL KA T+P+ TT+ EACRRMAARRVD +LLTD+NALL GILTD+  DI T   +  + L   E P  +V+  + ++
Subjt:  EKLRLLKAHTIPEGTTVSEACRRMAARRVDVVLLTDANALLLGILTDKTFDIYTHETISKRSLKGNEIPNMEVIFNDTIY

Q9FMV3 CBS domain-containing protein CBSCBSPB12.4e-0938.64Show/hide
Query:  PRRRNSLT------QKHAPSTSNRKLVSADNGSTSNGNVPKPGSLPQLSKDSEKLRLLKAHTIPEGTTVSEACRRMAARRVDVVLLTDANALLLGILTDK
        PRR  S+T      +K +   + R L   D G  S      P  L    +  ++LRL KA T+P  TT+ EAC+RMA+RRVD +LLTD+N +L GILTDK
Subjt:  PRRRNSLT------QKHAPSTSNRKLVSADNGSTSNGNVPKPGSLPQLSKDSEKLRLLKAHTIPEGTTVSEACRRMAARRVDVVLLTDANALLLGILTDK

Query:  TFDIYTHETISKRSLKGNEIPNMEVIFNDTIY
          DI T   +  + L   E P  +V+  + ++
Subjt:  TFDIYTHETISKRSLKGNEIPNMEVIFNDTIY

Q9LF97 CBS domain-containing protein CBSCBSPB31.7e-1550.43Show/hide
Query:  MTTQLVPP-----RRRNSLTQKHAPSTSNRKLVSADNGSTSNGNVPKPGSLPQLSKDS---------EKLRLLKAHTIPEGTTVSEACRRMAARRVDVVL
        M+TQ   P     RR NS  ++  P   ++K V ++NGS  NGN  KP S P   +           +KLRL KA TIPEGTTV +ACRRMAARRVD  L
Subjt:  MTTQLVPP-----RRRNSLTQKHAPSTSNRKLVSADNGSTSNGNVPKPGSLPQLSKDS---------EKLRLLKAHTIPEGTTVSEACRRMAARRVDVVL

Query:  LTDANALLLGILTDK
        LTD++ALL GI+TDK
Subjt:  LTDANALLLGILTDK

Q9SJQ5 CBS domain-containing protein CBSCBSPB21.3e-1248.18Show/hide
Query:  MTTQLVPPRRRNSLTQKHAPSTSNRKLVSADNGSTSNG----NVPKPGS-LPQLSKDSE----KLRLLKAHTIPEGTTVSEACRRMAARRVDVVLLTDAN
        MTT      RR+  + +   S S + ++ ++   + +G    N  KP S L Q   D E    KLRL KA TI EGTTV +ACRRMAARRVD VLLTD++
Subjt:  MTTQLVPPRRRNSLTQKHAPSTSNRKLVSADNGSTSNG----NVPKPGS-LPQLSKDSE----KLRLLKAHTIPEGTTVSEACRRMAARRVDVVLLTDAN

Query:  ALLLGILTDK
        ALL GI+TDK
Subjt:  ALLLGILTDK

Arabidopsis top hitse value%identityAlignment
AT2G36500.1 CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein9.6e-1448.18Show/hide
Query:  MTTQLVPPRRRNSLTQKHAPSTSNRKLVSADNGSTSNG----NVPKPGS-LPQLSKDSE----KLRLLKAHTIPEGTTVSEACRRMAARRVDVVLLTDAN
        MTT      RR+  + +   S S + ++ ++   + +G    N  KP S L Q   D E    KLRL KA TI EGTTV +ACRRMAARRVD VLLTD++
Subjt:  MTTQLVPPRRRNSLTQKHAPSTSNRKLVSADNGSTSNG----NVPKPGS-LPQLSKDSE----KLRLLKAHTIPEGTTVSEACRRMAARRVDVVLLTDAN

Query:  ALLLGILTDK
        ALL GI+TDK
Subjt:  ALLLGILTDK

AT3G52950.1 CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein1.2e-1650.43Show/hide
Query:  MTTQLVPP-----RRRNSLTQKHAPSTSNRKLVSADNGSTSNGNVPKPGSLPQLSKDS---------EKLRLLKAHTIPEGTTVSEACRRMAARRVDVVL
        M+TQ   P     RR NS  ++  P   ++K V ++NGS  NGN  KP S P   +           +KLRL KA TIPEGTTV +ACRRMAARRVD  L
Subjt:  MTTQLVPP-----RRRNSLTQKHAPSTSNRKLVSADNGSTSNGNVPKPGSLPQLSKDS---------EKLRLLKAHTIPEGTTVSEACRRMAARRVDVVL

Query:  LTDANALLLGILTDK
        LTD++ALL GI+TDK
Subjt:  LTDANALLLGILTDK

AT3G52950.2 CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein1.2e-1650.43Show/hide
Query:  MTTQLVPP-----RRRNSLTQKHAPSTSNRKLVSADNGSTSNGNVPKPGSLPQLSKDS---------EKLRLLKAHTIPEGTTVSEACRRMAARRVDVVL
        M+TQ   P     RR NS  ++  P   ++K V ++NGS  NGN  KP S P   +           +KLRL KA TIPEGTTV +ACRRMAARRVD  L
Subjt:  MTTQLVPP-----RRRNSLTQKHAPSTSNRKLVSADNGSTSNGNVPKPGSLPQLSKDS---------EKLRLLKAHTIPEGTTVSEACRRMAARRVDVVL

Query:  LTDANALLLGILTDK
        LTD++ALL GI+TDK
Subjt:  LTDANALLLGILTDK

AT5G50530.1 CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein3.6e-1351.25Show/hide
Query:  EKLRLLKAHTIPEGTTVSEACRRMAARRVDVVLLTDANALLLGILTDKTFDIYTHETISKRSLKGNEIPNMEVIFNDTIY
        ++LRL KA T+P+ TT+ EACRRMAARRVD +LLTD+NALL GILTD+  DI T   +  + L   E P  +V+  + ++
Subjt:  EKLRLLKAHTIPEGTTVSEACRRMAARRVDVVLLTDANALLLGILTDKTFDIYTHETISKRSLKGNEIPNMEVIFNDTIY

AT5G50640.1 CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein3.6e-1351.25Show/hide
Query:  EKLRLLKAHTIPEGTTVSEACRRMAARRVDVVLLTDANALLLGILTDKTFDIYTHETISKRSLKGNEIPNMEVIFNDTIY
        ++LRL KA T+P+ TT+ EACRRMAARRVD +LLTD+NALL GILTD+  DI T   +  + L   E P  +V+  + ++
Subjt:  EKLRLLKAHTIPEGTTVSEACRRMAARRVDVVLLTDANALLLGILTDKTFDIYTHETISKRSLKGNEIPNMEVIFNDTIY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTACTCAACTCGTTCCTCCAAGAAGGAGAAACTCCCTCACTCAGAAACACGCTCCTTCCACCTCTAACAGGAAGTTAGTCTCTGCCGATAATGGTAGCACTAGTAA
TGGCAATGTTCCAAAACCGGGTTCTCTTCCTCAGTTGTCAAAGGATAGTGAAAAGTTGAGGTTGTTGAAAGCACATACAATTCCTGAGGGGACTACGGTTTCTGAAGCGT
GTAGAAGAATGGCTGCTCGTCGTGTTGATGTTGTGCTGCTGACAGATGCAAATGCTTTACTTTTAGGTATTCTTACTGACAAGACGTTTGATATCTATACCCATGAAACA
ATATCTAAACGGTCCCTAAAAGGAAATGAAATCCCTAATATGGAAGTGATTTTTAATGATACTATTTATCATGCAGAAGGGTTCGTTGTTGCTTGTGTAGATGTTCTACA
AATCATACACACTGCAATATCTATAGTAAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGACTACTCAACTCGTTCCTCCAAGAAGGAGAAACTCCCTCACTCAGAAACACGCTCCTTCCACCTCTAACAGGAAGTTAGTCTCTGCCGATAATGGTAGCACTAGTAA
TGGCAATGTTCCAAAACCGGGTTCTCTTCCTCAGTTGTCAAAGGATAGTGAAAAGTTGAGGTTGTTGAAAGCACATACAATTCCTGAGGGGACTACGGTTTCTGAAGCGT
GTAGAAGAATGGCTGCTCGTCGTGTTGATGTTGTGCTGCTGACAGATGCAAATGCTTTACTTTTAGGTATTCTTACTGACAAGACGTTTGATATCTATACCCATGAAACA
ATATCTAAACGGTCCCTAAAAGGAAATGAAATCCCTAATATGGAAGTGATTTTTAATGATACTATTTATCATGCAGAAGGGTTCGTTGTTGCTTGTGTAGATGTTCTACA
AATCATACACACTGCAATATCTATAGTAAAGTAA
Protein sequenceShow/hide protein sequence
MTTQLVPPRRRNSLTQKHAPSTSNRKLVSADNGSTSNGNVPKPGSLPQLSKDSEKLRLLKAHTIPEGTTVSEACRRMAARRVDVVLLTDANALLLGILTDKTFDIYTHET
ISKRSLKGNEIPNMEVIFNDTIYHAEGFVVACVDVLQIIHTAISIVK