; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10017938 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10017938
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionThioredoxin-like 3-1
Genome locationChr03:26394295..26394630
RNA-Seq ExpressionHG10017938
SyntenyHG10017938
Gene Ontology termsGO:0009570 - chloroplast stroma (cellular component)
InterPro domainsIPR044253 - Thioredoxin-like 3-1/3-2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060704.1 thioredoxin-like 3-1 [Cucumis melo var. makuwa]9.4e-3486.02Show/hide
Query:  MSVLGANSSQILYRQLHQHQILSNGKRC-FLNTDFGLLGDQRRRELRIKAEDGFWPDLSRPALVEMESIDDSDHLDRILIHAQQLSQPILIDW
        M VLGA+SS ILY QLHQHQ LSNGKRC FLNTDF   GD RRRELRIKAE GFWPDLSRPA VEMESIDDSD LDRILIHAQQLSQPILIDW
Subjt:  MSVLGANSSQILYRQLHQHQILSNGKRC-FLNTDFGLLGDQRRRELRIKAEDGFWPDLSRPALVEMESIDDSDHLDRILIHAQQLSQPILIDW
TYK08231.1 thioredoxin-like 3-1 [Cucumis melo var. makuwa]9.4e-3486.02Show/hide
Query:  MSVLGANSSQILYRQLHQHQILSNGKRC-FLNTDFGLLGDQRRRELRIKAEDGFWPDLSRPALVEMESIDDSDHLDRILIHAQQLSQPILIDW
        M VLGA+SS ILY QLHQHQ LSNGKRC FLNTDF   GD RRRELRIKAE GFWPDLSRPA VEMESIDDSD LDRILIHAQQLSQPILIDW
Subjt:  MSVLGANSSQILYRQLHQHQILSNGKRC-FLNTDFGLLGDQRRRELRIKAEDGFWPDLSRPALVEMESIDDSDHLDRILIHAQQLSQPILIDW
XP_008442136.1 PREDICTED: thioredoxin-like 3-1, chloroplastic [Cucumis melo]9.4e-3486.02Show/hide
Query:  MSVLGANSSQILYRQLHQHQILSNGKRC-FLNTDFGLLGDQRRRELRIKAEDGFWPDLSRPALVEMESIDDSDHLDRILIHAQQLSQPILIDW
        M VLGA+SS ILY QLHQHQ LSNGKRC FLNTDF   GD RRRELRIKAE GFWPDLSRPA VEMESIDDSD LDRILIHAQQLSQPILIDW
Subjt:  MSVLGANSSQILYRQLHQHQILSNGKRC-FLNTDFGLLGDQRRRELRIKAEDGFWPDLSRPALVEMESIDDSDHLDRILIHAQQLSQPILIDW
XP_038883417.1 thioredoxin-like 3-1, chloroplastic isoform X1 [Benincasa hispida]4.2e-4295.65Show/hide
Query:  MSVLGANSSQILYRQLHQHQILSNGKRCFLNTDFGLLGDQRRRELRIKAEDGFWPDLSRPALVEMESIDDSDHLDRILIHAQQLSQPILIDW
        MSVLGANSSQILYRQLHQHQILS GKRCFLNTDFGLLGDQRRRELRIKAE GFWPDLSRPA VEMESIDDSDHLDRILIH+QQLSQPILIDW
Subjt:  MSVLGANSSQILYRQLHQHQILSNGKRCFLNTDFGLLGDQRRRELRIKAEDGFWPDLSRPALVEMESIDDSDHLDRILIHAQQLSQPILIDW
XP_038883418.1 thioredoxin-like 3-1, chloroplastic isoform X2 [Benincasa hispida]4.2e-4295.65Show/hide
Query:  MSVLGANSSQILYRQLHQHQILSNGKRCFLNTDFGLLGDQRRRELRIKAEDGFWPDLSRPALVEMESIDDSDHLDRILIHAQQLSQPILIDW
        MSVLGANSSQILYRQLHQHQILS GKRCFLNTDFGLLGDQRRRELRIKAE GFWPDLSRPA VEMESIDDSDHLDRILIH+QQLSQPILIDW
Subjt:  MSVLGANSSQILYRQLHQHQILSNGKRCFLNTDFGLLGDQRRRELRIKAEDGFWPDLSRPALVEMESIDDSDHLDRILIHAQQLSQPILIDW
TrEMBL top hitse value%identityAlignment
A0A0A0KZ53 Thioredoxin domain-containing protein8.1e-3179.57Show/hide
Query:  MSVLGANSSQILYRQLHQHQILSNGKRC-FLNTDFGLLGDQRRRELRIKAEDGFWPDLSRPALVEMESIDDSDHLDRILIHAQQLSQPILIDW
        MSVLGA++S ILY  LHQH  L+N KRC FL+TDF   GD RRRELRIKAE GFWPDLSRPA VEMESIDDSD LDRILIHAQ LSQPILIDW
Subjt:  MSVLGANSSQILYRQLHQHQILSNGKRC-FLNTDFGLLGDQRRRELRIKAEDGFWPDLSRPALVEMESIDDSDHLDRILIHAQQLSQPILIDW
A0A1S3B504 thioredoxin-like 3-1, chloroplastic4.6e-3486.02Show/hide
Query:  MSVLGANSSQILYRQLHQHQILSNGKRC-FLNTDFGLLGDQRRRELRIKAEDGFWPDLSRPALVEMESIDDSDHLDRILIHAQQLSQPILIDW
        M VLGA+SS ILY QLHQHQ LSNGKRC FLNTDF   GD RRRELRIKAE GFWPDLSRPA VEMESIDDSD LDRILIHAQQLSQPILIDW
Subjt:  MSVLGANSSQILYRQLHQHQILSNGKRC-FLNTDFGLLGDQRRRELRIKAEDGFWPDLSRPALVEMESIDDSDHLDRILIHAQQLSQPILIDW
A0A5A7V069 Thioredoxin-like 3-14.6e-3486.02Show/hide
Query:  MSVLGANSSQILYRQLHQHQILSNGKRC-FLNTDFGLLGDQRRRELRIKAEDGFWPDLSRPALVEMESIDDSDHLDRILIHAQQLSQPILIDW
        M VLGA+SS ILY QLHQHQ LSNGKRC FLNTDF   GD RRRELRIKAE GFWPDLSRPA VEMESIDDSD LDRILIHAQQLSQPILIDW
Subjt:  MSVLGANSSQILYRQLHQHQILSNGKRC-FLNTDFGLLGDQRRRELRIKAEDGFWPDLSRPALVEMESIDDSDHLDRILIHAQQLSQPILIDW
A0A5D3C8R2 Thioredoxin-like 3-14.6e-3486.02Show/hide
Query:  MSVLGANSSQILYRQLHQHQILSNGKRC-FLNTDFGLLGDQRRRELRIKAEDGFWPDLSRPALVEMESIDDSDHLDRILIHAQQLSQPILIDW
        M VLGA+SS ILY QLHQHQ LSNGKRC FLNTDF   GD RRRELRIKAE GFWPDLSRPA VEMESIDDSD LDRILIHAQQLSQPILIDW
Subjt:  MSVLGANSSQILYRQLHQHQILSNGKRC-FLNTDFGLLGDQRRRELRIKAEDGFWPDLSRPALVEMESIDDSDHLDRILIHAQQLSQPILIDW
A0A6J1HTV8 thioredoxin-like 3-1, chloroplastic1.7e-2563.46Show/hide
Query:  MSVLGANSSQILYRQLH--QHQILSNG-KRCFLNTDFGLL------GDQ---RRRELRIKAEDGFWPDLSRPALVEMESIDDSDHLDRILIHAQQLSQPI
        MSVL A+++QILY ++H  QHQI SNG +RCF+N DFG +      G+Q   RRRE R+  E GFWPDLSRPA+VEMESI+DS+ LDRIL HAQ+LSQP+
Subjt:  MSVLGANSSQILYRQLH--QHQILSNG-KRCFLNTDFGLL------GDQ---RRRELRIKAEDGFWPDLSRPALVEMESIDDSDHLDRILIHAQQLSQPI

Query:  LIDW
        LIDW
Subjt:  LIDW
SwissProt top hitse value%identityAlignment
Q9FG36 Thioredoxin-like 3-1, chloroplastic1.6e-0734.65Show/hide
Query:  ANSSQILYRQLH--------QHQILSNGKRC------FLNTDFGLLGDQRRRELRIKAEDGFWPDLSRPALVEMESIDDSDHLDRILIHAQQLSQPILID
        A++ Q+L RQ H        + + L+  K+C      + N   G       +E R+KA   FW ++++P  +EME I++ + LD +L HA+QLSQPI+I+
Subjt:  ANSSQILYRQLH--------QHQILSNGKRC------FLNTDFGLLGDQRRRELRIKAEDGFWPDLSRPALVEMESIDDSDHLDRILIHAQQLSQPILID

Query:  W
        W
Subjt:  W
Arabidopsis top hitse value%identityAlignment
AT5G06690.1 WCRKC thioredoxin 11.1e-0834.65Show/hide
Query:  ANSSQILYRQLH--------QHQILSNGKRC------FLNTDFGLLGDQRRRELRIKAEDGFWPDLSRPALVEMESIDDSDHLDRILIHAQQLSQPILID
        A++ Q+L RQ H        + + L+  K+C      + N   G       +E R+KA   FW ++++P  +EME I++ + LD +L HA+QLSQPI+I+
Subjt:  ANSSQILYRQLH--------QHQILSNGKRC------FLNTDFGLLGDQRRRELRIKAEDGFWPDLSRPALVEMESIDDSDHLDRILIHAQQLSQPILID

Query:  W
        W
Subjt:  W
AT5G06690.2 WCRKC thioredoxin 11.1e-0834.65Show/hide
Query:  ANSSQILYRQLH--------QHQILSNGKRC------FLNTDFGLLGDQRRRELRIKAEDGFWPDLSRPALVEMESIDDSDHLDRILIHAQQLSQPILID
        A++ Q+L RQ H        + + L+  K+C      + N   G       +E R+KA   FW ++++P  +EME I++ + LD +L HA+QLSQPI+I+
Subjt:  ANSSQILYRQLH--------QHQILSNGKRC------FLNTDFGLLGDQRRRELRIKAEDGFWPDLSRPALVEMESIDDSDHLDRILIHAQQLSQPILID

Query:  W
        W
Subjt:  W

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGTTTTGGGTGCAAATAGTTCTCAGATTTTGTACAGACAACTTCACCAACACCAAATTCTAAGCAATGGGAAGCGTTGTTTTCTCAATACAGATTTTGGG
CTTCTTGGAGATCAGCGACGGAGGGAGCTCAGAATCAAGGCGGAGGATGGCTTTTGGCCGGACTTGTCCCGTCCGGCGCTGGTGGAGATGGAGTCCATTGACGAT
TCCGATCACCTCGATCGGATTTTGATTCACGCCCAACAACTTTCTCAGCCAATTCTTATTGATTGGTTCGTATTTCTCTTCTTATCTTTCATTCCCTTCCATTCC
GTACCAAGGGTTTTTCTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGTTTTGGGTGCAAATAGTTCTCAGATTTTGTACAGACAACTTCACCAACACCAAATTCTAAGCAATGGGAAGCGTTGTTTTCTCAATACAGATTTTGGG
CTTCTTGGAGATCAGCGACGGAGGGAGCTCAGAATCAAGGCGGAGGATGGCTTTTGGCCGGACTTGTCCCGTCCGGCGCTGGTGGAGATGGAGTCCATTGACGAT
TCCGATCACCTCGATCGGATTTTGATTCACGCCCAACAACTTTCTCAGCCAATTCTTATTGATTGGTTCGTATTTCTCTTCTTATCTTTCATTCCCTTCCATTCC
GTACCAAGGGTTTTTCTGTAA
Protein sequenceShow/hide protein sequence
MSVLGANSSQILYRQLHQHQILSNGKRCFLNTDFGLLGDQRRRELRIKAEDGFWPDLSRPALVEMESIDDSDHLDRILIHAQQLSQPILIDWFVFLFLSFIPFHS
VPRVFL