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HG10017952 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10017952
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionMuDR family transposase
Genome locationChr03:27920010..27920414
RNA-Seq ExpressionHG10017952
SyntenyHG10017952
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041167.1 uncharacterized protein E6C27_scaffold128G00980 [Cucumis melo var. makuwa]1.3e-0529.41Show/hide
Query:  VVDFLCYMNGNIVNGSNGIEYDMQPC--LHIIIIHQIEFNTFIDGLCNALSID-RDDEIEVIFRYGSYV-GGSTFYIPISLRSEPDLKFMMSNALSHPNI
        ++ F+ ++NGN+++GS+GI+YD   C    I +   I F  FI+ + +++ ID R  +IE+I+R+      G   ++P  + +E  +K M S A+   N+
Subjt:  VVDFLCYMNGNIVNGSNGIEYDMQPC--LHIIIIHQIEFNTFIDGLCNALSID-RDDEIEVIFRYGSYV-GGSTFYIPISLRSEPDLKFMMSNALSHPNI

Query:  VDLYISQPNIA-----NQTSTREIENNIEVDSDDDE
        V LY++   ++     N  S  ++E+  +V   D E
Subjt:  VDLYISQPNIA-----NQTSTREIENNIEVDSDDDE

XP_023750776.1 uncharacterized protein LOC111899128 [Lactuca sativa]4.8e-0836.89Show/hide
Query:  VDFLCYMNGNIVNGSNGIEYDMQPCLHIIIIHQIEFNTFIDGLCNALSIDRDD-EIEVIFRYGSYVGGSTFYIPISLRSEPDLKFMMSNALSHPNI--VD
        V FLCY +G I +G  GI YD  P   I +   I+FN  ++ +  A SID+    I+VI RY S VG    YIP+ ++ + D++ M      H  +  +D
Subjt:  VDFLCYMNGNIVNGSNGIEYDMQPCLHIIIIHQIEFNTFIDGLCNALSIDRDD-EIEVIFRYGSYVGGSTFYIPISLRSEPDLKFMMSNALSHPNI--VD

Query:  LYI
        LY+
Subjt:  LYI

XP_023763615.1 uncharacterized protein LOC111912107 [Lactuca sativa]7.0e-0732.33Show/hide
Query:  VDFLCYMNGNIVNGSNGIEYDMQPCLHIIIIHQIEFNTFIDGLCNALSIDRDD-EIEVIFRYGSYVGGSTFYIPISLRSEPDLKFMMSNALSHPNI--VD
        V FLCY +G I +G  GI YD  P   I +   I+FN  ++ +  A SID+    I+VI RY S VG    YIP+ ++ + D++ M      H  +  +D
Subjt:  VDFLCYMNGNIVNGSNGIEYDMQPCLHIIIIHQIEFNTFIDGLCNALSIDRDD-EIEVIFRYGSYVGGSTFYIPISLRSEPDLKFMMSNALSHPNI--VD

Query:  LYISQPNIANQTSTREIENNIEVDSDDDEEKIL
        LY+      N+          E D  ++E  I+
Subjt:  LYISQPNIANQTSTREIENNIEVDSDDDEEKIL

XP_023765763.1 uncharacterized protein LOC111914214 [Lactuca sativa]3.5e-0635.92Show/hide
Query:  VDFLCYMNGNIVNGSNGIEYDMQPCLHIIIIHQIEFNTFIDGLCNALSIDRDD-EIEVIFRYGSYVGGSTFYIPISLRSEPDLKFMMSNALSHPNI--VD
        V  LCY +G I +G  GI Y+  P   I +   I+FN  I+ +  A SID+    I+VI RY S VG    YIP+ ++ + D++ M      H  +  +D
Subjt:  VDFLCYMNGNIVNGSNGIEYDMQPCLHIIIIHQIEFNTFIDGLCNALSIDRDD-EIEVIFRYGSYVGGSTFYIPISLRSEPDLKFMMSNALSHPNI--VD

Query:  LYI
        LY+
Subjt:  LYI

XP_038877923.1 uncharacterized protein LOC120070133 [Benincasa hispida]1.8e-3460.45Show/hide
Query:  MNVVDFLCYMNGNIVNGSNGIEYDMQPCLHIIIIHQIEFNTFIDGLCNALSIDRDDEIEVIFRYGSYVGGSTFYIPISLRSEPDLKFMMSNALSHPNIVD
        M+VV+FLCYM+GNIVNG +GIEYD QP L I +  Q +FNT IDG  +A SI+RDD +EVIFRYGSYV  STF+IPISLRS+ D++FMMSNA   PN V+
Subjt:  MNVVDFLCYMNGNIVNGSNGIEYDMQPCLHIIIIHQIEFNTFIDGLCNALSIDRDDEIEVIFRYGSYVGGSTFYIPISLRSEPDLKFMMSNALSHPNIVD

Query:  LYISQPNIANQTSTREIENNIEVDSDDDEEKILD
        LYISQP++ + TSTRE    +E++S   E++  D
Subjt:  LYISQPNIANQTSTREIENNIEVDSDDDEEKILD

TrEMBL top hitse value%identityAlignment
A0A1R3KYW1 MuDR family transposase4.1e-0528.79Show/hide
Query:  VDFLCYMNGNIVNGSNGIEYDMQPCLHIIIIHQIEFNTFIDGLCNALSIDRDD-EIEVIFRYGSYVGGSTFYIPISLRSEPDLKFMMSNALSHPNI--VD
        +  LCY NGNIV G  G+ YD  P   + +   + +   ++ + +  S+DR    I++  RY S VG +  YI I +R + D+  M      H  +  +D
Subjt:  VDFLCYMNGNIVNGSNGIEYDMQPCLHIIIIHQIEFNTFIDGLCNALSIDRDD-EIEVIFRYGSYVGGSTFYIPISLRSEPDLKFMMSNALSHPNI--VD

Query:  LYISQPNIANQTSTREIENNIEVDSDDDEEKI
        LY+          T  + ++I   S+ DE+ I
Subjt:  LYISQPNIANQTSTREIENNIEVDSDDDEEKI

A0A2U1M5P5 DNA-binding WRKY1.6e-0431.39Show/hide
Query:  VDFLCYMNGNIVNGSNGIEYDMQPCLHIIIIHQIEFNTFIDGLCNALSIDRDDE-IEVIFRYGSYVGGSTFYIPISLRSEPDLK--FMMSNALSHPNIVD
        V  LCY  GNI +G  G+ Y+  P   I +   I+FN  ++ L  A SID+    I+VI RY S  G    YIP+ +  + D++  F + N     + +D
Subjt:  VDFLCYMNGNIVNGSNGIEYDMQPCLHIIIIHQIEFNTFIDGLCNALSIDRDDE-IEVIFRYGSYVGGSTFYIPISLRSEPDLK--FMMSNALSHPNIVD

Query:  LYIS-----QPNIANQTSTRE-IENNIEVDSDDDEEK
        LY+         IA +T  +  IE +  +  +  +EK
Subjt:  LYIS-----QPNIANQTSTRE-IENNIEVDSDDDEEK

A0A5A7THR5 Uncharacterized protein6.4e-0629.41Show/hide
Query:  VVDFLCYMNGNIVNGSNGIEYDMQPC--LHIIIIHQIEFNTFIDGLCNALSID-RDDEIEVIFRYGSYV-GGSTFYIPISLRSEPDLKFMMSNALSHPNI
        ++ F+ ++NGN+++GS+GI+YD   C    I +   I F  FI+ + +++ ID R  +IE+I+R+      G   ++P  + +E  +K M S A+   N+
Subjt:  VVDFLCYMNGNIVNGSNGIEYDMQPC--LHIIIIHQIEFNTFIDGLCNALSID-RDDEIEVIFRYGSYV-GGSTFYIPISLRSEPDLKFMMSNALSHPNI

Query:  VDLYISQPNIA-----NQTSTREIENNIEVDSDDDE
        V LY++   ++     N  S  ++E+  +V   D E
Subjt:  VDLYISQPNIA-----NQTSTREIENNIEVDSDDDE

A5B5G3 SWIM-type domain-containing protein2.0e-0425.93Show/hide
Query:  NVVDFLCYMNGNIVNGSNGIEYDMQPCLHIIIIHQIEFNTFIDGLCNALSIDRDDE-IEVIFRYG---SYVGGSTFYIPISLRSEPDLKFMMSNALSHP-
        +++  +CY +G I++G NG+ Y   P   +++ + I+++   D LC+ +SIDR    + +IFRY    S   G+  YI + ++ + D++ M       P 
Subjt:  NVVDFLCYMNGNIVNGSNGIEYDMQPCLHIIIIHQIEFNTFIDGLCNALSIDRDDE-IEVIFRYG---SYVGGSTFYIPISLRSEPDLKFMMSNALSHP-

Query:  -NIVDLYISQPNIANQTSTREIENNIEVDSDDDEE
         N +++Y+          TR  +++ E+    D+E
Subjt:  -NIVDLYISQPNIANQTSTREIENNIEVDSDDDEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGTTGTGGATTTTCTATGTTATATGAATGGAAACATTGTTAATGGGTCGAATGGTATAGAATACGATATGCAACCATGTCTTCATATAATTATTATCCATCAAAT
TGAATTCAACACATTTATAGATGGATTATGTAATGCATTATCTATAGATAGAGATGACGAGATAGAGGTAATATTTAGATATGGAAGCTATGTAGGAGGATCTACTTTCT
ACATCCCCATCTCATTACGAAGTGAACCTGATTTAAAGTTTATGATGAGCAACGCTCTATCCCATCCAAATATAGTGGATCTCTATATTTCTCAACCAAACATCGCAAAT
CAAACATCAACAAGGGAAATTGAAAATAATATTGAGGTCGATAGTGATGATGATGAGGAGAAAATTTTGGACTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATGTTGTGGATTTTCTATGTTATATGAATGGAAACATTGTTAATGGGTCGAATGGTATAGAATACGATATGCAACCATGTCTTCATATAATTATTATCCATCAAAT
TGAATTCAACACATTTATAGATGGATTATGTAATGCATTATCTATAGATAGAGATGACGAGATAGAGGTAATATTTAGATATGGAAGCTATGTAGGAGGATCTACTTTCT
ACATCCCCATCTCATTACGAAGTGAACCTGATTTAAAGTTTATGATGAGCAACGCTCTATCCCATCCAAATATAGTGGATCTCTATATTTCTCAACCAAACATCGCAAAT
CAAACATCAACAAGGGAAATTGAAAATAATATTGAGGTCGATAGTGATGATGATGAGGAGAAAATTTTGGACTAA
Protein sequenceShow/hide protein sequence
MNVVDFLCYMNGNIVNGSNGIEYDMQPCLHIIIIHQIEFNTFIDGLCNALSIDRDDEIEVIFRYGSYVGGSTFYIPISLRSEPDLKFMMSNALSHPNIVDLYISQPNIAN
QTSTREIENNIEVDSDDDEEKILD