; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10017956 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10017956
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptioncell division control protein 48 homolog C-like
Genome locationChr03:28049425..28049823
RNA-Seq ExpressionHG10017956
SyntenyHG10017956
Gene Ontology termsGO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
InterPro domainsIPR003959 - ATPase, AAA-type, core
IPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ONK79348.1 uncharacterized protein A4U43_C01F5450 [Asparagus officinalis]1.4e-2347.55Show/hide
Query:  APSIIFIGEIDAIASKEENLPTCTDRRILPHLKIWMNKISYSNS------------RGFVRVVGATNKLDRIESTLRVTKYFTEEIEICFPDENSRLEIL
        APSIIFI EIDAIASK ENL    +RRI+  L   M++  ++ S             G+V V+GATN+ D ++  LR    F  EI +  PDEN+RLEIL
Subjt:  APSIIFIGEIDAIASKEENLPTCTDRRILPHLKIWMNKISYSNS------------RGFVRVVGATNKLDRIESTLRVTKYFTEEIEICFPDENSRLEIL

Query:  LILTNKLGLESDFNMLKVAKATLGYVGLDLTILVDKVVDVAMR
         +LT K  LE +FN++K+A+AT G+VG DL  LV+K  ++AMR
Subjt:  LILTNKLGLESDFNMLKVAKATLGYVGLDLTILVDKVVDVAMR

XP_010681887.1 PREDICTED: cell division control protein 48 homolog C [Beta vulgaris subsp. vulgaris]6.8e-2347.95Show/hide
Query:  APSIIFIGEIDAIASKEENLPTCTDRRILPHLKIWMNKISYS---------------NSRGFVRVVGATNKLDRIESTLRVTKYFTEEIEICFPDENSRL
        APSI+FI EIDAIASK ENL    +RRI+  L   M++ SYS               N+ G+V V+GATN+ D I+S LR    F  EI +  PDEN+RL
Subjt:  APSIIFIGEIDAIASKEENLPTCTDRRILPHLKIWMNKISYS---------------NSRGFVRVVGATNKLDRIESTLRVTKYFTEEIEICFPDENSRL

Query:  EILLILTNKLGLESDFNMLKVAKATLGYVGLDLTILVDKVVDVAMR
        +IL ILT  L L+ DF+++K+AKAT G+VG DL  L +K  ++AM+
Subjt:  EILLILTNKLGLESDFNMLKVAKATLGYVGLDLTILVDKVVDVAMR

XP_020253210.1 cell division control protein 48 homolog C-like [Asparagus officinalis]1.4e-2347.55Show/hide
Query:  APSIIFIGEIDAIASKEENLPTCTDRRILPHLKIWMNKISYSNS------------RGFVRVVGATNKLDRIESTLRVTKYFTEEIEICFPDENSRLEIL
        APSIIFI EIDAIASK ENL    +RRI+  L   M++  ++ S             G+V V+GATN+ D ++  LR    F  EI +  PDEN+RLEIL
Subjt:  APSIIFIGEIDAIASKEENLPTCTDRRILPHLKIWMNKISYSNS------------RGFVRVVGATNKLDRIESTLRVTKYFTEEIEICFPDENSRLEIL

Query:  LILTNKLGLESDFNMLKVAKATLGYVGLDLTILVDKVVDVAMR
         +LT K  LE +FN++K+A+AT G+VG DL  LV+K  ++AMR
Subjt:  LILTNKLGLESDFNMLKVAKATLGYVGLDLTILVDKVVDVAMR

XP_020274402.1 cell division control protein 48 homolog C-like [Asparagus officinalis]1.4e-2347.55Show/hide
Query:  APSIIFIGEIDAIASKEENLPTCTDRRILPHLKIWMNKISYSNS------------RGFVRVVGATNKLDRIESTLRVTKYFTEEIEICFPDENSRLEIL
        APSIIFI EIDAIASK ENL    +RRI+  L   M++  ++ S             G+V V+GATN+ D ++  LR    F  EI +  PDEN+RLEIL
Subjt:  APSIIFIGEIDAIASKEENLPTCTDRRILPHLKIWMNKISYSNS------------RGFVRVVGATNKLDRIESTLRVTKYFTEEIEICFPDENSRLEIL

Query:  LILTNKLGLESDFNMLKVAKATLGYVGLDLTILVDKVVDVAMR
         +LT K  LE +FN++K+A+AT G+VG DL  LV+K  ++AMR
Subjt:  LILTNKLGLESDFNMLKVAKATLGYVGLDLTILVDKVVDVAMR

XP_027932318.1 cell division control protein 48 homolog C [Vigna unguiculata]4.4e-2248.18Show/hide
Query:  APSIIFIGEIDAIASKEENLPTCTDRRILPHLKIWMNKISY------SNSRGFVRVVGATNKLDRIESTLRVTKYFTEEIEICFPDENSRLEILLILTNK
        APSI+FI EIDAIASK ENL    ++RI+  L   M++ +       S S G+V V+GATN+ D I+  LR    F  EI IC PDE++R EIL +LT+ 
Subjt:  APSIIFIGEIDAIASKEENLPTCTDRRILPHLKIWMNKISY------SNSRGFVRVVGATNKLDRIESTLRVTKYFTEEIEICFPDENSRLEILLILTNK

Query:  LGLESDFNMLKVAKATLGYVGLDLTILVDKVVDVAMR
        L LE  F++ ++A+AT G+VG DL  LVDK  ++AM+
Subjt:  LGLESDFNMLKVAKATLGYVGLDLTILVDKVVDVAMR

TrEMBL top hitse value%identityAlignment
A0A0J8EXZ2 Uncharacterized protein3.3e-2347.95Show/hide
Query:  APSIIFIGEIDAIASKEENLPTCTDRRILPHLKIWMNKISYS---------------NSRGFVRVVGATNKLDRIESTLRVTKYFTEEIEICFPDENSRL
        APSI+FI EIDAIASK ENL    +RRI+  L   M++ SYS               N+ G+V V+GATN+ D I+S LR    F  EI +  PDEN+RL
Subjt:  APSIIFIGEIDAIASKEENLPTCTDRRILPHLKIWMNKISYS---------------NSRGFVRVVGATNKLDRIESTLRVTKYFTEEIEICFPDENSRL

Query:  EILLILTNKLGLESDFNMLKVAKATLGYVGLDLTILVDKVVDVAMR
        +IL ILT  L L+ DF+++K+AKAT G+VG DL  L +K  ++AM+
Subjt:  EILLILTNKLGLESDFNMLKVAKATLGYVGLDLTILVDKVVDVAMR

A0A4D6KPE9 Ribosome biogenesis ATPase2.1e-2248.18Show/hide
Query:  APSIIFIGEIDAIASKEENLPTCTDRRILPHLKIWMNKISY------SNSRGFVRVVGATNKLDRIESTLRVTKYFTEEIEICFPDENSRLEILLILTNK
        APSI+FI EIDAIASK ENL    ++RI+  L   M++ +       S S G+V V+GATN+ D I+  LR    F  EI IC PDE++R EIL +LT+ 
Subjt:  APSIIFIGEIDAIASKEENLPTCTDRRILPHLKIWMNKISY------SNSRGFVRVVGATNKLDRIESTLRVTKYFTEEIEICFPDENSRLEILLILTNK

Query:  LGLESDFNMLKVAKATLGYVGLDLTILVDKVVDVAMR
        L LE  F++ ++A+AT G+VG DL  LVDK  ++AM+
Subjt:  LGLESDFNMLKVAKATLGYVGLDLTILVDKVVDVAMR

A0A5P1FM87 Uncharacterized protein6.7e-2447.55Show/hide
Query:  APSIIFIGEIDAIASKEENLPTCTDRRILPHLKIWMNKISYSNS------------RGFVRVVGATNKLDRIESTLRVTKYFTEEIEICFPDENSRLEIL
        APSIIFI EIDAIASK ENL    +RRI+  L   M++  ++ S             G+V V+GATN+ D ++  LR    F  EI +  PDEN+RLEIL
Subjt:  APSIIFIGEIDAIASKEENLPTCTDRRILPHLKIWMNKISYSNS------------RGFVRVVGATNKLDRIESTLRVTKYFTEEIEICFPDENSRLEIL

Query:  LILTNKLGLESDFNMLKVAKATLGYVGLDLTILVDKVVDVAMR
         +LT K  LE +FN++K+A+AT G+VG DL  LV+K  ++AMR
Subjt:  LILTNKLGLESDFNMLKVAKATLGYVGLDLTILVDKVVDVAMR

A0A6J1HNM4 cell division control protein 48 homolog C-like6.2e-2246.9Show/hide
Query:  APSIIFIGEIDAIASKEENLPTCTDRRILPHLKIWM-------------NKISYSNSR-GFVRVVGATNKLDRIESTLRVTKYFTEEIEICFPDENSRLE
        APSI+FI EIDAIASK ENL    +RRI+  L   M             +K   SN R G+V V+GATN+ D ++  LR    F  EI +  PDEN+R E
Subjt:  APSIIFIGEIDAIASKEENLPTCTDRRILPHLKIWM-------------NKISYSNSR-GFVRVVGATNKLDRIESTLRVTKYFTEEIEICFPDENSRLE

Query:  ILLILTNKLGLESDFNMLKVAKATLGYVGLDLTILVDKVVDVAMR
        IL +LT+ L L+  FN+LK+A+AT G+VG DLT L +K  ++AM+
Subjt:  ILLILTNKLGLESDFNMLKVAKATLGYVGLDLTILVDKVVDVAMR

M0SKS3 Uncharacterized protein2.8e-2246.9Show/hide
Query:  APSIIFIGEIDAIASKEENLPTCTDRRILPHLKIWMNKISYS------NSR--------GFVRVVGATNKLDRIESTLRVTKYFTEEIEICFPDENSRLE
        APSI+FI EIDAIASK ENL    +RRI+  L   M++   S      NS         G+V V+GATN+ D ++  LR    F  EI +  PDEN+RLE
Subjt:  APSIIFIGEIDAIASKEENLPTCTDRRILPHLKIWMNKISYS------NSR--------GFVRVVGATNKLDRIESTLRVTKYFTEEIEICFPDENSRLE

Query:  ILLILTNKLGLESDFNMLKVAKATLGYVGLDLTILVDKVVDVAMR
        IL +LT KL LE  FN+ K+A++T G+VG DL  LV+K  ++AM+
Subjt:  ILLILTNKLGLESDFNMLKVAKATLGYVGLDLTILVDKVVDVAMR

SwissProt top hitse value%identityAlignment
O28972 Cell division cycle protein 48 homolog AF_12971.7e-1641.98Show/hide
Query:  APSIIFIGEIDAIASKEENLPTCTDRRILPHLKIWMNKISYSNSRGFVRVVGATNKLDRIESTLRVTKYFTEEIEICFPDENSRLEILLILTNKLGLESD
        APSIIFI EID+IA K E +    +RR++  L   M+ +    +RG V V+ ATN+ D I+  LR    F  EIEI  PD+  R EIL I T K+ L  D
Subjt:  APSIIFIGEIDAIASKEENLPTCTDRRILPHLKIWMNKISYSNSRGFVRVVGATNKLDRIESTLRVTKYFTEEIEICFPDENSRLEILLILTNKLGLESD

Query:  FNMLKVAKATLGYVGLDLTILVDKVVDVAMR
         ++ ++A+ T G+VG DL  L  +    A+R
Subjt:  FNMLKVAKATLGYVGLDLTILVDKVVDVAMR

P54774 Cell division cycle protein 48 homolog4.4e-1745.45Show/hide
Query:  APSIIFIGEIDAIASKEENLPTCTDRRILPHLKIWMNKISYSNSRGFVRVVGATNKLDRIESTLRVTKYFTEEIEICFPDENSRLEILLILTNKLGLESD
        APSIIFI EID+IA K E      +RRI+  L   M+ +    SR  V V+GATN+ + I+  LR    F  EI+I  PDE  RLE+L I T  + L  D
Subjt:  APSIIFIGEIDAIASKEENLPTCTDRRILPHLKIWMNKISYSNSRGFVRVVGATNKLDRIESTLRVTKYFTEEIEICFPDENSRLEILLILTNKLGLESD

Query:  FNMLKVAKATLGYVGLDLTIL
         ++ ++AK T GYVG DL  L
Subjt:  FNMLKVAKATLGYVGLDLTIL

Q07590 Protein SAV9.9e-1741.22Show/hide
Query:  APSIIFIGEIDAIASKEENLPTCTDRRILPHLKIWMNKISYSNSRGFVRVVGATNKLDRIESTLRVTKYFTEEIEICFPDENSRLEILLILTNKLGLESD
        APSIIFI EIDAIA K E++    ++R++  L   M+ I     RG V V+GATN+ D I+  LR    F  EIEI  PD   R +IL + T  + +  D
Subjt:  APSIIFIGEIDAIASKEENLPTCTDRRILPHLKIWMNKISYSNSRGFVRVVGATNKLDRIESTLRVTKYFTEEIEICFPDENSRLEILLILTNKLGLESD

Query:  FNMLKVAKATLGYVGLDLTILVDKVVDVAMR
         ++ K+A+ T GY G DL  L  +    A+R
Subjt:  FNMLKVAKATLGYVGLDLTILVDKVVDVAMR

Q9SCN8 Cell division control protein 48 homolog D1.7e-1645.45Show/hide
Query:  APSIIFIGEIDAIASKEENLPTCTDRRILPHLKIWMNKISYSNSRGFVRVVGATNKLDRIESTLRVTKYFTEEIEICFPDENSRLEILLILTNKLGLESD
        APSIIFI EID+IA K E      +RRI+  L   M+ +    SR  V V+GATN+ + I+  LR    F  EI+I  PDE  RLE+L I T  + L  D
Subjt:  APSIIFIGEIDAIASKEENLPTCTDRRILPHLKIWMNKISYSNSRGFVRVVGATNKLDRIESTLRVTKYFTEEIEICFPDENSRLEILLILTNKLGLESD

Query:  FNMLKVAKATLGYVGLDLTIL
         ++ +V+K T GYVG DL  L
Subjt:  FNMLKVAKATLGYVGLDLTIL

Q9SS94 Cell division control protein 48 homolog C1.1e-1843.2Show/hide
Query:  APSIIFIGEIDAIASKEENLPTCTDRRILPHLKIWM-------NKISYSNSRGFVRVVGATNKLDRIESTLRVTKYFTEEIEICFPDENSRLEILLILTN
        APSI+FI EIDAI SK EN     ++RI+  L   M       +K +  +S GFV V+GATN+ D ++  LR +  F  EI +  PDE++R EIL ++  
Subjt:  APSIIFIGEIDAIASKEENLPTCTDRRILPHLKIWM-------NKISYSNSRGFVRVVGATNKLDRIESTLRVTKYFTEEIEICFPDENSRLEILLILTN

Query:  KLGLESDFNMLKVAKATLGYVGLDL
        KL LE  F+  ++A+ T G+VG DL
Subjt:  KLGLESDFNMLKVAKATLGYVGLDL

Arabidopsis top hitse value%identityAlignment
AT2G03670.1 cell division cycle 48B7.5e-1235.83Show/hide
Query:  PSIIFIGEIDAIASKEENLPTCTDRRILPHLKIWMNKISYSNSRGFVRVVGATNKLDRIESTLRVTKYFTEEIEICFPDENSRLEILLILTNKLGLESDF
        PS+IFI EID +  + +      D RI   L   M+    S+S   V VV +TN++D I+  LR    F   +E+  P+E  RL+IL + T K+ L+   
Subjt:  PSIIFIGEIDAIASKEENLPTCTDRRILPHLKIWMNKISYSNSRGFVRVVGATNKLDRIESTLRVTKYFTEEIEICFPDENSRLEILLILTNKLGLESDF

Query:  NMLKVAKATLGYVGLDLTIL
        ++  +A +  GYVG DL  L
Subjt:  NMLKVAKATLGYVGLDLTIL

AT3G01610.1 cell division cycle 48C7.5e-2043.2Show/hide
Query:  APSIIFIGEIDAIASKEENLPTCTDRRILPHLKIWM-------NKISYSNSRGFVRVVGATNKLDRIESTLRVTKYFTEEIEICFPDENSRLEILLILTN
        APSI+FI EIDAI SK EN     ++RI+  L   M       +K +  +S GFV V+GATN+ D ++  LR +  F  EI +  PDE++R EIL ++  
Subjt:  APSIIFIGEIDAIASKEENLPTCTDRRILPHLKIWM-------NKISYSNSRGFVRVVGATNKLDRIESTLRVTKYFTEEIEICFPDENSRLEILLILTN

Query:  KLGLESDFNMLKVAKATLGYVGLDL
        KL LE  F+  ++A+ T G+VG DL
Subjt:  KLGLESDFNMLKVAKATLGYVGLDL

AT3G09840.1 cell division cycle 481.6e-1744.63Show/hide
Query:  APSIIFIGEIDAIASKEENLPTCTDRRILPHLKIWMNKISYSNSRGFVRVVGATNKLDRIESTLRVTKYFTEEIEICFPDENSRLEILLILTNKLGLESD
        APSIIFI EID+IA K E      +RRI+  L   M+ +    SR  V V+GATN+ + I+  LR    F  EI+I  PDE  RLE+L I T  + L  D
Subjt:  APSIIFIGEIDAIASKEENLPTCTDRRILPHLKIWMNKISYSNSRGFVRVVGATNKLDRIESTLRVTKYFTEEIEICFPDENSRLEILLILTNKLGLESD

Query:  FNMLKVAKATLGYVGLDLTIL
         ++ +++K T GYVG DL  L
Subjt:  FNMLKVAKATLGYVGLDLTIL

AT3G53230.1 ATPase, AAA-type, CDC48 protein1.2e-1745.45Show/hide
Query:  APSIIFIGEIDAIASKEENLPTCTDRRILPHLKIWMNKISYSNSRGFVRVVGATNKLDRIESTLRVTKYFTEEIEICFPDENSRLEILLILTNKLGLESD
        APSIIFI EID+IA K E      +RRI+  L   M+ +    SR  V V+GATN+ + I+  LR    F  EI+I  PDE  RLE+L I T  + L  D
Subjt:  APSIIFIGEIDAIASKEENLPTCTDRRILPHLKIWMNKISYSNSRGFVRVVGATNKLDRIESTLRVTKYFTEEIEICFPDENSRLEILLILTNKLGLESD

Query:  FNMLKVAKATLGYVGLDLTIL
         ++ +V+K T GYVG DL  L
Subjt:  FNMLKVAKATLGYVGLDLTIL

AT5G03340.1 ATPase, AAA-type, CDC48 protein1.6e-1744.63Show/hide
Query:  APSIIFIGEIDAIASKEENLPTCTDRRILPHLKIWMNKISYSNSRGFVRVVGATNKLDRIESTLRVTKYFTEEIEICFPDENSRLEILLILTNKLGLESD
        APSIIFI EID+IA K E      +RRI+  L   M+ +    SR  V V+GATN+ + I+  LR    F  EI+I  PDE  RLE+L I T  + L  D
Subjt:  APSIIFIGEIDAIASKEENLPTCTDRRILPHLKIWMNKISYSNSRGFVRVVGATNKLDRIESTLRVTKYFTEEIEICFPDENSRLEILLILTNKLGLESD

Query:  FNMLKVAKATLGYVGLDLTIL
         ++ +++K T GYVG DL  L
Subjt:  FNMLKVAKATLGYVGLDLTIL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCACCATCAATAATTTTCATTGGTGAGATCGATGCAATTGCGTCAAAAGAAGAAAATCTTCCTACATGCACAGACAGACGAATCCTACCACATCTAAAGATCTGG
ATGAACAAAATTTCATATTCTAATTCTAGAGGTTTTGTCCGTGTGGTTGGAGCAACCAACAAACTAGATAGGATTGAATCGACATTAAGGGTAACCAAGTATTTT
ACCGAGGAGATTGAAATTTGTTTTCCAGATGAAAATTCTAGGCTAGAAATACTTTTGATCCTTACTAACAAATTAGGTCTTGAAAGTGATTTTAATATGTTAAAA
GTAGCCAAGGCAACTCTAGGCTATGTGGGACTTGATCTCACAATCTTGGTCGACAAAGTTGTTGATGTCGCGATGAGGATTTAG
mRNA sequenceShow/hide mRNA sequence
GCACCATCAATAATTTTCATTGGTGAGATCGATGCAATTGCGTCAAAAGAAGAAAATCTTCCTACATGCACAGACAGACGAATCCTACCACATCTAAAGATCTGG
ATGAACAAAATTTCATATTCTAATTCTAGAGGTTTTGTCCGTGTGGTTGGAGCAACCAACAAACTAGATAGGATTGAATCGACATTAAGGGTAACCAAGTATTTT
ACCGAGGAGATTGAAATTTGTTTTCCAGATGAAAATTCTAGGCTAGAAATACTTTTGATCCTTACTAACAAATTAGGTCTTGAAAGTGATTTTAATATGTTAAAA
GTAGCCAAGGCAACTCTAGGCTATGTGGGACTTGATCTCACAATCTTGGTCGACAAAGTTGTTGATGTCGCGATGAGGATTTAG
Protein sequenceShow/hide protein sequence
APSIIFIGEIDAIASKEENLPTCTDRRILPHLKIWMNKISYSNSRGFVRVVGATNKLDRIESTLRVTKYFTEEIEICFPDENSRLEILLILTNKLGLESDFNMLK
VAKATLGYVGLDLTILVDKVVDVAMRI