; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10017982 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10017982
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionCysteine-rich RLK (Receptor-like protein kinase) 8
Genome locationChr03:28529255..28530386
RNA-Seq ExpressionHG10017982
SyntenyHG10017982
Gene Ontology termsGO:0006281 - DNA repair (biological process)
GO:0032508 - DNA duplex unwinding (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0043138 - 3'-5' DNA helicase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0062494.1 uncharacterized protein E6C27_scaffold130G00900 [Cucumis melo var. makuwa]1.7e-1234.15Show/hide
Query:  MKGYGGWLSIKNLPLDYWCRNTFEAIGAYFGGLENIEIKH---------------------EIKHEIKDEKCDNIFLNSGDFEIVEVPKFTHGDLFIKNF
        +KGY GWL IKNLPLD WCR+TFE IG +  GL +I I+                          EI D K  NI+L+ GDFE +  P+ +   + + +F
Subjt:  MKGYGGWLSIKNLPLDYWCRNTFEAIGAYFGGLENIEIKH---------------------EIKHEIKDEKCDNIFLNSGDFEIVEVPKFTHGDLFIKNF

Query:  TNPIDLVRLNQVSQDEGIDIEVLKPEWSFLTSSQSKPELSRNPFA------AFEKVESKKLQTS
         N ID +++  V  DE +D+       +   S  +    SRN FA      A      KK +TS
Subjt:  TNPIDLVRLNQVSQDEGIDIEVLKPEWSFLTSSQSKPELSRNPFA------AFEKVESKKLQTS

KAA0063414.1 uncharacterized protein E6C27_scaffold508G00510 [Cucumis melo var. makuwa]1.2e-2143.17Show/hide
Query:  MKGYGGWLSIKNLPLDYWCRNTFEAIGAYFGGLENIEIK-------HEIKHEIKDEKC--------------DNIFLNSGDFEIVEVPKFTHGDLFIKNF
        +KGYGGW+SIKNLPLDYW  + ++AIG +FGG E+I +K        E K ++    C              DNIFLN GD +++E PK     LFI   
Subjt:  MKGYGGWLSIKNLPLDYWCRNTFEAIGAYFGGLENIEIK-------HEIKHEIKDEKC--------------DNIFLNSGDFEIVEVPKFTHGDLFIKNF

Query:  TNPIDLVRLNQVSQDEGIDI-EVLKPEWSFLTSSQSKPE
         N IDL+R+NQV  DEG +  +++K EW+FL+S  S  +
Subjt:  TNPIDLVRLNQVSQDEGIDI-EVLKPEWSFLTSSQSKPE

TYK28792.1 pseudouridylate synthase 7-like protein isoform X1 [Cucumis melo var. makuwa]5.8e-1342.61Show/hide
Query:  DYWCRNTFEAIGAYFGGLENI-----------EIKHEIKH----------EIKDEKCDNIFLNSGDFEIVEVPKFTHGDLFIKNFTNPIDLVRLNQVSQD
        DYWCR TFEAIG +F GLE I           E K +IK           EI DE     FLN GD E++       GDL +K+F NPIDL+R+ QV +D
Subjt:  DYWCRNTFEAIGAYFGGLENI-----------EIKHEIKH----------EIKDEKCDNIFLNSGDFEIVEVPKFTHGDLFIKNFTNPIDLVRLNQVSQD

Query:  EGIDIEVLKPEWSFL
        E  +   + PEW F+
Subjt:  EGIDIEVLKPEWSFL

XP_031738083.1 uncharacterized protein LOC116402658 [Cucumis sativus]6.9e-1435.42Show/hide
Query:  MKGYGGWLSIKNLPLDYWCRNTFEAIGAYFGGL---------------ENIEIKHEI------KHEIKDEKCDNIFLNSGDFEIVEVPKFTHGDLFIKNF
        +KGYGGWL +KNLPLD W R+ FEAIG +FGG                  I++K  +       +EI D K  NIFL+ G+FE +  P           +
Subjt:  MKGYGGWLSIKNLPLDYWCRNTFEAIGAYFGGL---------------ENIEIKHEI------KHEIKDEKCDNIFLNSGDFEIVEVPKFTHGDLFIKNF

Query:  TNPIDLVRLNQVSQDEGIDIEVLKPEWSFLTSSQSKPELSRNPF
         N +D +R+ +   DEG D+    P  S   S  +    SR+PF
Subjt:  TNPIDLVRLNQVSQDEGIDIEVLKPEWSFLTSSQSKPELSRNPF

XP_038904899.1 uncharacterized protein LOC120091119 isoform X2 [Benincasa hispida]4.2e-2745.12Show/hide
Query:  MKGYGGWLSIKNLPLDYWCRNTFEAIGAYFGGLENI--EIKHEIK-------------------HEIKDEKCDNIFLNSGDFEIVEVPKFTHGDLFIKNF
        ++GYGGW+SIKNLPLDYWC+ TFEAIG YFGGLE+I  EI + IK                    E+ +EK  +I+LN GD      P    GDLF  +F
Subjt:  MKGYGGWLSIKNLPLDYWCRNTFEAIGAYFGGLENI--EIKHEIK-------------------HEIKDEKCDNIFLNSGDFEIVEVPKFTHGDLFIKNF

Query:  TNPIDLVRLNQVSQDEGIDIEVLKPEWSFLTSSQSKPELSRNPFAAFEKVESKKLQTSLVAKNS
        TNPIDL+RLN+V   EGI  + L  +++FL SS    + SR+P    +  ES+K +    AK S
Subjt:  TNPIDLVRLNQVSQDEGIDIEVLKPEWSFLTSSQSKPELSRNPFAAFEKVESKKLQTSLVAKNS

TrEMBL top hitse value%identityAlignment
A0A5A7U6A9 Uncharacterized protein3.1e-1239.83Show/hide
Query:  KGYGGWLSIKNLPLDYWCRNTFEAIGAYFGGLEN---------------IEIKHEI------KHEIKDEKCDNIFLNSGDFEIVEVPKFTHGDLFIKNFT
        +GYGGWL IKNLPLDYWCR+T E I  +FGGL +               I++K  +        EI D K  NI+L+ GDFE +     +       +F 
Subjt:  KGYGGWLSIKNLPLDYWCRNTFEAIGAYFGGLEN---------------IEIKHEI------KHEIKDEKCDNIFLNSGDFEIVEVPKFTHGDLFIKNFT

Query:  NPIDLVRLNQVSQDEGID
        N ID +R+  V  DE ID
Subjt:  NPIDLVRLNQVSQDEGID

A0A5A7V878 DUF4283 domain-containing protein5.7e-2243.17Show/hide
Query:  MKGYGGWLSIKNLPLDYWCRNTFEAIGAYFGGLENIEIK-------HEIKHEIKDEKC--------------DNIFLNSGDFEIVEVPKFTHGDLFIKNF
        +KGYGGW+SIKNLPLDYW  + ++AIG +FGG E+I +K        E K ++    C              DNIFLN GD +++E PK     LFI   
Subjt:  MKGYGGWLSIKNLPLDYWCRNTFEAIGAYFGGLENIEIK-------HEIKHEIKDEKC--------------DNIFLNSGDFEIVEVPKFTHGDLFIKNF

Query:  TNPIDLVRLNQVSQDEGIDI-EVLKPEWSFLTSSQSKPE
         N IDL+R+NQV  DEG +  +++K EW+FL+S  S  +
Subjt:  TNPIDLVRLNQVSQDEGIDI-EVLKPEWSFLTSSQSKPE

A0A5D3CZ35 DNA/RNA polymerases superfamily protein1.1e-1239.37Show/hide
Query:  EAIGAYFGGLENI-----------EIKHEIKH----------EIKDEKCDNIFLNSGDFEIVEVPKFTHGDLFIKNFTNPIDLVRLNQVSQDEGIDIEVL
        + IGA+FGGLENI           E K + K           EI DE+  NIFLN G   +   P    GDLF  NF+N +D+VRL+QV +DEG+    L
Subjt:  EAIGAYFGGLENI-----------EIKHEIKH----------EIKDEKCDNIFLNSGDFEIVEVPKFTHGDLFIKNFTNPIDLVRLNQVSQDEGIDIEVL

Query:  KPEWSFLTSSQSKPELSRNPFAAFEKV
         P++ +L  S S P + RNP+   E++
Subjt:  KPEWSFLTSSQSKPELSRNPFAAFEKV

A0A5D3DVS9 Uncharacterized protein8.2e-1334.15Show/hide
Query:  MKGYGGWLSIKNLPLDYWCRNTFEAIGAYFGGLENIEIKH---------------------EIKHEIKDEKCDNIFLNSGDFEIVEVPKFTHGDLFIKNF
        +KGY GWL IKNLPLD WCR+TFE IG +  GL +I I+                          EI D K  NI+L+ GDFE +  P+ +   + + +F
Subjt:  MKGYGGWLSIKNLPLDYWCRNTFEAIGAYFGGLENIEIKH---------------------EIKHEIKDEKCDNIFLNSGDFEIVEVPKFTHGDLFIKNF

Query:  TNPIDLVRLNQVSQDEGIDIEVLKPEWSFLTSSQSKPELSRNPFA------AFEKVESKKLQTS
         N ID +++  V  DE +D+       +   S  +    SRN FA      A      KK +TS
Subjt:  TNPIDLVRLNQVSQDEGIDIEVLKPEWSFLTSSQSKPELSRNPFA------AFEKVESKKLQTS

A0A5D3DYX0 Pseudouridylate synthase 7-like protein isoform X12.8e-1342.61Show/hide
Query:  DYWCRNTFEAIGAYFGGLENI-----------EIKHEIKH----------EIKDEKCDNIFLNSGDFEIVEVPKFTHGDLFIKNFTNPIDLVRLNQVSQD
        DYWCR TFEAIG +F GLE I           E K +IK           EI DE     FLN GD E++       GDL +K+F NPIDL+R+ QV +D
Subjt:  DYWCRNTFEAIGAYFGGLENI-----------EIKHEIKH----------EIKDEKCDNIFLNSGDFEIVEVPKFTHGDLFIKNFTNPIDLVRLNQVSQD

Query:  EGIDIEVLKPEWSFL
        E  +   + PEW F+
Subjt:  EGIDIEVLKPEWSFL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGGATATGGGGGTTGGTTATCGATAAAAAACCTTCCATTAGATTACTGGTGCAGAAACACTTTTGAAGCAATTGGAGCTTATTTTGGAGGCCTTGAAAACATTGA
GATAAAGCATGAGATAAAGCATGAGATAAAGGATGAGAAGTGCGACAATATTTTTTTAAATTCCGGTGATTTTGAAATAGTTGAAGTTCCTAAGTTCACTCATGGCGATT
TATTCATTAAAAACTTCACTAATCCAATTGATTTAGTTCGTCTGAATCAAGTTTCTCAGGATGAAGGCATTGACATTGAAGTTTTGAAGCCTGAATGGTCGTTCCTAACG
TCTTCGCAGTCCAAGCCAGAGTTATCAAGAAATCCATTCGCGGCATTTGAAAAAGTAGAATCTAAAAAGTTACAGACCTCTTTGGTGGCAAAGAATTCTTCGCCGGTGAT
CGGAACTCTCCATGTCGATCATATGGATTCATCATCAAAGATGACGAATCGTCATTTTAGTGTGAACGCATTGAAGGAACCCGAAGAGTCAGGTTTAATGAGGAAAGAGA
GTTTAGTTGGCGGATTGATTAATGGGCCCAATGACGTGCTCTATTTTATCGCTCTTAATAATAATATCACTAAAGTTTCTCAATCTAAGACCATTGAAATTCCCCTGAAG
GCAATTGAAAGATCACCTGGTCCCACTTTGGCCGATTCAAGCTCCAAGAAAAACAACTCAACATTTTTTGTCCCTTCGAATCTGTTAGCATCCTCCCCAGTCGAAGTTGT
AAAGTTCCCAACAGCCTCACAGAAGTTTTCGCACCTACTGAAGCCGTTTCTCAACAATCGAGTTCAAGTTCCAGCCCTTTCTAAGAGGTCAGTTATTCCTTCTTCTATAT
CTCAACAATTCAAGCACTCTGTTTTCACCATTCCTAATTCAAAGATTAAACTTTTGAGAGGTACTCCGTGCTGCCCATCAACTTCTTATCAGAAAAGGAAAAGTGCATCA
GATTTTGATTCCCCGATCACTGTTAGCAGTGAGGATTCTGATTACTTGGAATATGGAGTGGACTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAGGATATGGGGGTTGGTTATCGATAAAAAACCTTCCATTAGATTACTGGTGCAGAAACACTTTTGAAGCAATTGGAGCTTATTTTGGAGGCCTTGAAAACATTGA
GATAAAGCATGAGATAAAGCATGAGATAAAGGATGAGAAGTGCGACAATATTTTTTTAAATTCCGGTGATTTTGAAATAGTTGAAGTTCCTAAGTTCACTCATGGCGATT
TATTCATTAAAAACTTCACTAATCCAATTGATTTAGTTCGTCTGAATCAAGTTTCTCAGGATGAAGGCATTGACATTGAAGTTTTGAAGCCTGAATGGTCGTTCCTAACG
TCTTCGCAGTCCAAGCCAGAGTTATCAAGAAATCCATTCGCGGCATTTGAAAAAGTAGAATCTAAAAAGTTACAGACCTCTTTGGTGGCAAAGAATTCTTCGCCGGTGAT
CGGAACTCTCCATGTCGATCATATGGATTCATCATCAAAGATGACGAATCGTCATTTTAGTGTGAACGCATTGAAGGAACCCGAAGAGTCAGGTTTAATGAGGAAAGAGA
GTTTAGTTGGCGGATTGATTAATGGGCCCAATGACGTGCTCTATTTTATCGCTCTTAATAATAATATCACTAAAGTTTCTCAATCTAAGACCATTGAAATTCCCCTGAAG
GCAATTGAAAGATCACCTGGTCCCACTTTGGCCGATTCAAGCTCCAAGAAAAACAACTCAACATTTTTTGTCCCTTCGAATCTGTTAGCATCCTCCCCAGTCGAAGTTGT
AAAGTTCCCAACAGCCTCACAGAAGTTTTCGCACCTACTGAAGCCGTTTCTCAACAATCGAGTTCAAGTTCCAGCCCTTTCTAAGAGGTCAGTTATTCCTTCTTCTATAT
CTCAACAATTCAAGCACTCTGTTTTCACCATTCCTAATTCAAAGATTAAACTTTTGAGAGGTACTCCGTGCTGCCCATCAACTTCTTATCAGAAAAGGAAAAGTGCATCA
GATTTTGATTCCCCGATCACTGTTAGCAGTGAGGATTCTGATTACTTGGAATATGGAGTGGACTAG
Protein sequenceShow/hide protein sequence
MKGYGGWLSIKNLPLDYWCRNTFEAIGAYFGGLENIEIKHEIKHEIKDEKCDNIFLNSGDFEIVEVPKFTHGDLFIKNFTNPIDLVRLNQVSQDEGIDIEVLKPEWSFLT
SSQSKPELSRNPFAAFEKVESKKLQTSLVAKNSSPVIGTLHVDHMDSSSKMTNRHFSVNALKEPEESGLMRKESLVGGLINGPNDVLYFIALNNNITKVSQSKTIEIPLK
AIERSPGPTLADSSSKKNNSTFFVPSNLLASSPVEVVKFPTASQKFSHLLKPFLNNRVQVPALSKRSVIPSSISQQFKHSVFTIPNSKIKLLRGTPCCPSTSYQKRKSAS
DFDSPITVSSEDSDYLEYGVD