CuGenDBv2

Gene ID	HG10017985
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Aspartate carbamoyltransferase
Genome location	Chr03:28581138..28582629
RNA-Seq Expression	HG10017985
Synteny	HG10017985
Gene Ontology terms	GO:0006207 - 'de novo' pyrimidine nucleobase biosynthetic process (biological process) GO:0006520 - cellular amino acid metabolic process (biological process) GO:0016036 - cellular response to phosphate starvation (biological process) GO:0044205 - 'de novo' UMP biosynthetic process (biological process) GO:0005829 - cytosol (cellular component) GO:0004070 - aspartate carbamoyltransferase activity (molecular function) GO:0016597 - amino acid binding (molecular function)
InterPro domains	IPR006131 - Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain IPR036901 - Aspartate/ornithine carbamoyltransferase superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7015530.1 Aspartate carbamoyltransferase 2, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]

7.9e-34

85.39

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Query:  REIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKDDIKYYLTSLDVKWEECDNLMEVASECDLVYQTRIQPEKF
        REIGKLDGIKVGLVGDLA GRTVRSLAYLL KYQDVKIY V PDV+KMKDDIK YL+S  VKWEEC+NLMEVASECD+VYQTRIQ E+F
Subjt:  REIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKDDIKYYLTSLDVKWEECDNLMEVASECDLVYQTRIQPEKF

XP_004149350.1 aspartate carbamoyltransferase, chloroplastic [Cucumis sativus]

2.7e-34

86.52

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Query:  REIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKDDIKYYLTSLDVKWEECDNLMEVASECDLVYQTRIQPEKF
        REIGKLDGIKVGLVGDLA GRTVRSLAYLL KY+DVKIY V PDV+KMKDDIK YLTS DVKWEECDNL EVASECD+VYQTRIQ E+F
Subjt:  REIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKDDIKYYLTSLDVKWEECDNLMEVASECDLVYQTRIQPEKF

XP_008449144.1 PREDICTED: aspartate carbamoyltransferase, chloroplastic [Cucumis melo]

5.4e-35

87.64

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Query:  REIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKDDIKYYLTSLDVKWEECDNLMEVASECDLVYQTRIQPEKF
        REIGKLDGIKVGLVGDLA GRTVRSLAYLL KY+DVKIY V PDV+KMKDDIK YLTS DVKWEECDNLMEVASECD+VYQTRIQ E+F
Subjt:  REIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKDDIKYYLTSLDVKWEECDNLMEVASECDLVYQTRIQPEKF

XP_022158871.1 aspartate carbamoyltransferase, chloroplastic isoform X1 [Momordica charantia]

9.3e-35

87.64

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Query:  REIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKDDIKYYLTSLDVKWEECDNLMEVASECDLVYQTRIQPEKF
        REIGKLDGIKVGLVGDLA GRTVRSLAYLL KYQDVKIY V PDV+KMKDDIK YLTS  VKWEECDNLMEVASECD+VYQTRIQ E+F
Subjt:  REIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKDDIKYYLTSLDVKWEECDNLMEVASECDLVYQTRIQPEKF

XP_038905711.1 aspartate carbamoyltransferase, chloroplastic [Benincasa hispida]

1.9e-35

88.76

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Query:  REIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKDDIKYYLTSLDVKWEECDNLMEVASECDLVYQTRIQPEKF
        REIGKLDGIKVGLVGDLA GRTVRSLAYLL KYQDVKIY V PDV+KMKDDIK YLTS DVKWEECDNLMEVASECD+VYQTRIQ E+F
Subjt:  REIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKDDIKYYLTSLDVKWEECDNLMEVASECDLVYQTRIQPEKF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L2Y6 Aspartate carbamoyltransferase

1.3e-34

86.52

Show/hide

Query:  REIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKDDIKYYLTSLDVKWEECDNLMEVASECDLVYQTRIQPEKF
        REIGKLDGIKVGLVGDLA GRTVRSLAYLL KY+DVKIY V PDV+KMKDDIK YLTS DVKWEECDNL EVASECD+VYQTRIQ E+F
Subjt:  REIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKDDIKYYLTSLDVKWEECDNLMEVASECDLVYQTRIQPEKF

A0A1S3BLD7 Aspartate carbamoyltransferase

2.6e-35

87.64

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Query:  REIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKDDIKYYLTSLDVKWEECDNLMEVASECDLVYQTRIQPEKF
        REIGKLDGIKVGLVGDLA GRTVRSLAYLL KY+DVKIY V PDV+KMKDDIK YLTS DVKWEECDNLMEVASECD+VYQTRIQ E+F
Subjt:  REIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKDDIKYYLTSLDVKWEECDNLMEVASECDLVYQTRIQPEKF

A0A5A7UNJ2 Aspartate carbamoyltransferase

2.6e-35

87.64

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Query:  REIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKDDIKYYLTSLDVKWEECDNLMEVASECDLVYQTRIQPEKF
        REIGKLDGIKVGLVGDLA GRTVRSLAYLL KY+DVKIY V PDV+KMKDDIK YLTS DVKWEECDNLMEVASECD+VYQTRIQ E+F
Subjt:  REIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKDDIKYYLTSLDVKWEECDNLMEVASECDLVYQTRIQPEKF

A0A6J1E281 Aspartate carbamoyltransferase

4.5e-35

87.64

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Query:  REIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKDDIKYYLTSLDVKWEECDNLMEVASECDLVYQTRIQPEKF
        REIGKLDGIKVGLVGDLA GRTVRSLAYLL KYQDVKIY V PDV+KMKDDIK YLTS  VKWEECDNLMEVASECD+VYQTRIQ E+F
Subjt:  REIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKDDIKYYLTSLDVKWEECDNLMEVASECDLVYQTRIQPEKF

A0A6J1HJC0 Aspartate carbamoyltransferase

3.8e-34

85.39

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Query:  REIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKDDIKYYLTSLDVKWEECDNLMEVASECDLVYQTRIQPEKF
        REIGKLDGIKVGLVGDLA GRTVRSLAYLL KYQDVKIY V PDV+KMKDDIK YL+S  VKWEEC+NLMEVASECD+VYQTRIQ E+F
Subjt:  REIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKDDIKYYLTSLDVKWEECDNLMEVASECDLVYQTRIQPEKF

SwissProt top hits

e value

%identity

Alignment

P49077 Aspartate carbamoyltransferase, chloroplastic

1.1e-30

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Query:  EIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKDDIKYYLTSLDVKWEECDNLMEVASECDLVYQTRIQPEKF
        EIGKLDGI V LVGDLA GRTVRSLAYLL K++DVKIY V P+++KMKDDIK YLTS  V+WEE  +LMEVAS+CD+VYQTRIQ E+F
Subjt:  EIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKDDIKYYLTSLDVKWEECDNLMEVASECDLVYQTRIQPEKF

Q43064 Aspartate carbamoyltransferase 3, chloroplastic

4.1e-33

79.78

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Query:  REIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKDDIKYYLTSLDVKWEECDNLMEVASECDLVYQTRIQPEKF
        REIGKLDGIKVGLVGDLA GRTVRSLAYLL KY+DVKIY V P+V+KMKDDIK YLTS  V WEE  +L+EVASECD+VYQTRIQ E+F
Subjt:  REIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKDDIKYYLTSLDVKWEECDNLMEVASECDLVYQTRIQPEKF

Q43086 Aspartate carbamoyltransferase 1, chloroplastic

4.1e-33

78.65

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Query:  REIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKDDIKYYLTSLDVKWEECDNLMEVASECDLVYQTRIQPEKF
        REIGKLDGIKVGLVGDLA GRTVRSLAYLL KY+DVK+Y V P+V+KMKDDIK YLTS  V+WEE  +LMEVAS+CD+VYQTRIQ E+F
Subjt:  REIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKDDIKYYLTSLDVKWEECDNLMEVASECDLVYQTRIQPEKF

Q43087 Aspartate carbamoyltransferase 2, chloroplastic

1.2e-32

78.65

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Query:  REIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKDDIKYYLTSLDVKWEECDNLMEVASECDLVYQTRIQPEKF
        REIGKLDGIKVGLVGDLA GRTVRSL YLL KY+DVKIY V P+V+KMKDDIK YLTS  V WEE  +L+EVASECD+VYQTRIQ E+F
Subjt:  REIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKDDIKYYLTSLDVKWEECDNLMEVASECDLVYQTRIQPEKF

Q9LD61 Aspartate carbamoyltransferase, chloroplastic

5.9e-32

74.16

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Query:  REIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKDDIKYYLTSLDVKWEECDNLMEVASECDLVYQTRIQPEKF
        REIG LDGIK+GLVGDLA GRTVRSLAYL+ KYQ++KIY V PDV+KMKDDIK YLTS  V+WEE  +L+EVAS+CD++YQTRIQ E+F
Subjt:  REIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKDDIKYYLTSLDVKWEECDNLMEVASECDLVYQTRIQPEKF

Arabidopsis top hits

e value

%identity

Alignment

AT3G20330.1 PYRIMIDINE B

7.9e-32

Show/hide

Query:  EIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKDDIKYYLTSLDVKWEECDNLMEVASECDLVYQTRIQPEKF
        EIGKLDGI V LVGDLA GRTVRSLAYLL K++DVKIY V P+++KMKDDIK YLTS  V+WEE  +LMEVAS+CD+VYQTRIQ E+F
Subjt:  EIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKDDIKYYLTSLDVKWEECDNLMEVASECDLVYQTRIQPEKF

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGATCCAGACTCCAGAGCTTCTTTTGCTAAGCTTTGCGAGAACTTGAAAATAATCCTGTTGAGAGAGATAGGAAAACTTGATGGAATTAAAGTTGGGCTCGTGGGAGA
TCTTGCTACTGGGAGAACTGTACGGTCACTTGCATATTTGCTCGTTAAGTATCAAGATGTGAAAATATACCTTGTCTACCCAGATGTTCTAAAAATGAAGGATGATATAA
AATACTATTTGACATCACTAGATGTGAAATGGGAAGAATGTGACAACTTGATGGAAGTTGCATCAGAGTGTGATTTGGTATATCAAACTCGTATTCAGCCGGAAAAATTT
CGAGATATTGTTGGTTACAATGGTCACTGCCACACTTACAATCATTATGGTGGGGATCAAACATTCAACTTCAAGAGAGGTAGTACATGTCAATTAGCGCCGAGTAAGCT
CACTTGGGTTGTTGCTATACACATCTATGACTATTAG

mRNA sequence

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Protein sequence

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MDPDSRASFAKLCENLKIILLREIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKDDIKYYLTSLDVKWEECDNLMEVASECDLVYQTRIQPEKF
RDIVGYNGHCHTYNHYGGDQTFNFKRGSTCQLAPSKLTWVVAIHIYDY

HG10017985 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome