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HG10018003 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10018003
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionReverse transcriptase, RNA-dependent DNA polymerase
Genome locationChr03:28917972..28918325
RNA-Seq ExpressionHG10018003
SyntenyHG10018003
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0016310 - phosphorylation (biological process)
GO:0016301 - kinase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060627.1 Reverse transcriptase, RNA-dependent DNA polymerase [Cucumis melo var. makuwa]5.5e-0851.92Show/hide
Query:  TCPVDSPPFANLLNQVTSIKMDHNNFLLWQNIALPILHSYKLEGHFTGKDEC
        T    +PP   LLNQ++S+K+D  N+LLW+ +ALPI+ SYK EGH TG++ C
Subjt:  TCPVDSPPFANLLNQVTSIKMDHNNFLLWQNIALPILHSYKLEGHFTGKDEC
KAA0066132.1 putative leucine-rich repeat receptor-like protein kinase [Cucumis melo var. makuwa]5.5e-0857.45Show/hide
Query:  SPPFANLLNQVTSIKMDHNNFLLWQNIALPILHSYKLEGHFTGKDEC
        +PP   +LNQ+T+IK+D +N+LLW+ +ALPIL  YKLEGH TG+  C
Subjt:  SPPFANLLNQVTSIKMDHNNFLLWQNIALPILHSYKLEGHFTGKDEC
XP_016901223.1 PREDICTED: uncharacterized protein LOC107991202 [Cucumis melo]3.2e-0850Show/hide
Query:  VRSGTCPVDSPPFANLLNQVTSIKMDHNNFLLWQNIALPILHSYKLEGHFTGKDEC
        V S T    +PP   LLNQ++S+K+D  N+LLW+ +ALPI+ SYK EG+ TG++ C
Subjt:  VRSGTCPVDSPPFANLLNQVTSIKMDHNNFLLWQNIALPILHSYKLEGHFTGKDEC
XP_022151683.1 uncharacterized protein LOC111019598 [Momordica charantia]8.5e-0968.09Show/hide
Query:  SPPFANLLNQVTSIKMDHNNFLLWQNIALPILHSYKLEGHFTGKDEC
        SPP   LLNQ+TSIKMD  NFLLWQN+ALPIL SYKL  + TG   C
Subjt:  SPPFANLLNQVTSIKMDHNNFLLWQNIALPILHSYKLEGHFTGKDEC
XP_031745012.1 uncharacterized protein LOC116405217 [Cucumis sativus]1.9e-0850Show/hide
Query:  VRSGTCPVDSPPFANLLNQVTSIKMDHNNFLLWQNIALPILHSYKLEGHFTGKDEC
        + S T    +PP   +LNQ+ S+K+D  N+LLWQ +ALPIL SYKL+GH T +++C
Subjt:  VRSGTCPVDSPPFANLLNQVTSIKMDHNNFLLWQNIALPILHSYKLEGHFTGKDEC
TrEMBL top hitse value%identityAlignment
A0A1S4DZ26 uncharacterized protein LOC1079912021.6e-0850Show/hide
Query:  VRSGTCPVDSPPFANLLNQVTSIKMDHNNFLLWQNIALPILHSYKLEGHFTGKDEC
        V S T    +PP   LLNQ++S+K+D  N+LLW+ +ALPI+ SYK EG+ TG++ C
Subjt:  VRSGTCPVDSPPFANLLNQVTSIKMDHNNFLLWQNIALPILHSYKLEGHFTGKDEC
A0A5A7V1E0 Reverse transcriptase, RNA-dependent DNA polymerase2.7e-0851.92Show/hide
Query:  TCPVDSPPFANLLNQVTSIKMDHNNFLLWQNIALPILHSYKLEGHFTGKDEC
        T    +PP   LLNQ++S+K+D  N+LLW+ +ALPI+ SYK EGH TG++ C
Subjt:  TCPVDSPPFANLLNQVTSIKMDHNNFLLWQNIALPILHSYKLEGHFTGKDEC
A0A5A7VCS1 Putative leucine-rich repeat receptor-like protein kinase2.7e-0857.45Show/hide
Query:  SPPFANLLNQVTSIKMDHNNFLLWQNIALPILHSYKLEGHFTGKDEC
        +PP   +LNQ+T+IK+D +N+LLW+ +ALPIL  YKLEGH TG+  C
Subjt:  SPPFANLLNQVTSIKMDHNNFLLWQNIALPILHSYKLEGHFTGKDEC
A0A5D3BVJ1 Uncharacterized protein2.7e-0851.92Show/hide
Query:  TCPVDSPPFANLLNQVTSIKMDHNNFLLWQNIALPILHSYKLEGHFTGKDEC
        T    +PP   LLNQ++S+K+D  N+LLW+ +ALPI+ SYK EGH TG++ C
Subjt:  TCPVDSPPFANLLNQVTSIKMDHNNFLLWQNIALPILHSYKLEGHFTGKDEC
A0A6J1DCW4 uncharacterized protein LOC1110195984.1e-0968.09Show/hide
Query:  SPPFANLLNQVTSIKMDHNNFLLWQNIALPILHSYKLEGHFTGKDEC
        SPP   LLNQ+TSIKMD  NFLLWQN+ALPIL SYKL  + TG   C
Subjt:  SPPFANLLNQVTSIKMDHNNFLLWQNIALPILHSYKLEGHFTGKDEC
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAATCTTGTGAGCGATCCTTTGGGTGTTCCTCTCACATCCTCTGAAACAACTGTTCTTAGACCTCCTGTTGCTAAGAACTCCACCGATTCTGCCTATGTTAAGAA
AAATCTTGATGCGTATGAAGTTAGATCTGGAACCTGCCCTGTCGACTCCCCACCATTTGCTAACCTGTTGAACCAAGTAACTTCAATAAAGATGGACCACAATAATTTCC
TGTTGTGGCAAAATATTGCTCTCCCGATCCTTCATAGCTACAAGCTTGAGGGACATTTCACAGGTAAGGATGAATGTCTGATCGACCAAAAGTGTACAAATGATGAAATT
ATTAAATTCAATACTTGTATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTAATCTTGTGAGCGATCCTTTGGGTGTTCCTCTCACATCCTCTGAAACAACTGTTCTTAGACCTCCTGTTGCTAAGAACTCCACCGATTCTGCCTATGTTAAGAA
AAATCTTGATGCGTATGAAGTTAGATCTGGAACCTGCCCTGTCGACTCCCCACCATTTGCTAACCTGTTGAACCAAGTAACTTCAATAAAGATGGACCACAATAATTTCC
TGTTGTGGCAAAATATTGCTCTCCCGATCCTTCATAGCTACAAGCTTGAGGGACATTTCACAGGTAAGGATGAATGTCTGATCGACCAAAAGTGTACAAATGATGAAATT
ATTAAATTCAATACTTGTATGTGA
Protein sequenceShow/hide protein sequence
MANLVSDPLGVPLTSSETTVLRPPVAKNSTDSAYVKKNLDAYEVRSGTCPVDSPPFANLLNQVTSIKMDHNNFLLWQNIALPILHSYKLEGHFTGKDECLIDQKCTNDEI
IKFNTCM