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HG10018050 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10018050
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionTransposon Ty3-I Gag-Pol polyprotein
Genome locationChr03:29967866..29968024
RNA-Seq ExpressionHG10018050
SyntenyHG10018050
Gene Ontology termsGO:0000166 - nucleotide binding (molecular function)
GO:0016740 - transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040936.1 tRNA dimethylallyltransferase 2 [Cucumis melo var. makuwa]3.6e-0454Show/hide
Query:  MVQKRIKERLDAKDHEIACTRPDIQKLPAIKETLASLAKSVERLSVQAEE
        M QKR +E+L+A DH+I+  R ++ +LPAI+E L +LAKS+ERL VQ E+
Subjt:  MVQKRIKERLDAKDHEIACTRPDIQKLPAIKETLASLAKSVERLSVQAEE

KAA0045921.1 uncharacterized protein E6C27_scaffold243G004600 [Cucumis melo var. makuwa]3.3e-0556.86Show/hide
Query:  MVQKRIKERLDAKDHEIACTRPDIQKLPAIKETLASLAKSVERLSVQAEEQ
        M QKRI+E+L+  D EI+  R ++  LP+IKE ++SLAKS+ERL VQAE+Q
Subjt:  MVQKRIKERLDAKDHEIACTRPDIQKLPAIKETLASLAKSVERLSVQAEEQ

KAA0054161.1 uncharacterized protein E6C27_scaffold131G00900 [Cucumis melo var. makuwa]9.6e-0554.9Show/hide
Query:  MVQKRIKERLDAKDHEIACTRPDIQKLPAIKETLASLAKSVERLSVQAEEQ
        M QKRI+E+L+A D +I+  R ++ KLP I+E L+S AKS+ERL +QAE+Q
Subjt:  MVQKRIKERLDAKDHEIACTRPDIQKLPAIKETLASLAKSVERLSVQAEEQ

TYK13669.1 uncharacterized protein E5676_scaffold299G001870 [Cucumis melo var. makuwa]1.3e-0454.9Show/hide
Query:  MVQKRIKERLDAKDHEIACTRPDIQKLPAIKETLASLAKSVERLSVQAEEQ
        M QKRI+E+L+  D EI+  + ++  LP+IKE ++SLAKS+ERL VQAE+Q
Subjt:  MVQKRIKERLDAKDHEIACTRPDIQKLPAIKETLASLAKSVERLSVQAEEQ

TrEMBL top hitse value%identityAlignment
A0A5A7SPQ8 Transposon Ty3-I Gag-Pol polyprotein5.1e-0454.9Show/hide
Query:  MVQKRIKERLDAKDHEIACTRPDIQKLPAIKETLASLAKSVERLSVQAEEQ
        M QKRI+E+L   D EI+  R ++  LP+I+E  +SLAKSVER  VQAE+Q
Subjt:  MVQKRIKERLDAKDHEIACTRPDIQKLPAIKETLASLAKSVERLSVQAEEQ

A0A5A7TFW5 tRNA dimethylallyltransferase 21.8e-0454Show/hide
Query:  MVQKRIKERLDAKDHEIACTRPDIQKLPAIKETLASLAKSVERLSVQAEE
        M QKR +E+L+A DH+I+  R ++ +LPAI+E L +LAKS+ERL VQ E+
Subjt:  MVQKRIKERLDAKDHEIACTRPDIQKLPAIKETLASLAKSVERLSVQAEE

A0A5A7TWS7 Uncharacterized protein1.6e-0556.86Show/hide
Query:  MVQKRIKERLDAKDHEIACTRPDIQKLPAIKETLASLAKSVERLSVQAEEQ
        M QKRI+E+L+  D EI+  R ++  LP+IKE ++SLAKS+ERL VQAE+Q
Subjt:  MVQKRIKERLDAKDHEIACTRPDIQKLPAIKETLASLAKSVERLSVQAEEQ

A0A5A7UKU8 Uncharacterized protein4.6e-0554.9Show/hide
Query:  MVQKRIKERLDAKDHEIACTRPDIQKLPAIKETLASLAKSVERLSVQAEEQ
        M QKRI+E+L+A D +I+  R ++ KLP I+E L+S AKS+ERL +QAE+Q
Subjt:  MVQKRIKERLDAKDHEIACTRPDIQKLPAIKETLASLAKSVERLSVQAEEQ

A0A5D3CTZ7 Uncharacterized protein6.1e-0554.9Show/hide
Query:  MVQKRIKERLDAKDHEIACTRPDIQKLPAIKETLASLAKSVERLSVQAEEQ
        M QKRI+E+L+  D EI+  + ++  LP+IKE ++SLAKS+ERL VQAE+Q
Subjt:  MVQKRIKERLDAKDHEIACTRPDIQKLPAIKETLASLAKSVERLSVQAEEQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGCAAAAGAGGATTAAGGAACGGTTGGACGCGAAGGATCATGAGATTGCATGCACTCGACCCGATATTCAGAAGTTACCAGCAATCAAAGAGACGTTAGCTTCGTT
GGCTAAAAGTGTTGAAAGACTGAGTGTACAAGCTGAAGAACAATGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGCAAAAGAGGATTAAGGAACGGTTGGACGCGAAGGATCATGAGATTGCATGCACTCGACCCGATATTCAGAAGTTACCAGCAATCAAAGAGACGTTAGCTTCGTT
GGCTAAAAGTGTTGAAAGACTGAGTGTACAAGCTGAAGAACAATGGTGA
Protein sequenceShow/hide protein sequence
MVQKRIKERLDAKDHEIACTRPDIQKLPAIKETLASLAKSVERLSVQAEEQW