| GenBank top hits | e value | %identity | Alignment |
|---|
| XP_008457278.1 PREDICTED: probable RNA polymerase II transcription factor B subunit 1-1 isoform X1 [Cucumis melo] | 5.2e-131 | 88.15 | Show/hide |
Query: GKEQSKSWTSMRSQSQRMPSSQRTKAVVVVLKADT-DVDLEDPRTVAEALVRSRHAVEGNEKQTALDRISRMTAIEDLQASHSHPFAPLCIKDPRDYFDA
GKE ++ S +R S + VVL+ T DVDLEDPRTVAEALVRSRHAVEGNE+QTALDRISRMTAIEDLQA HSHPFAPLCIKDPRDYFDA
Subjt: GKEQSKSWTSMRSQSQRMPSSQRTKAVVVVLKADT-DVDLEDPRTVAEALVRSRHAVEGNEKQTALDRISRMTAIEDLQASHSHPFAPLCIKDPRDYFDA
Query: QQANAIKTLDDTRAGMQQTKCSLSTTEAYYSLRKSISEIKSSGLNHPIIKPEVALMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLHHWISIQ
QQANAIKTLDDTRAGMQQTKCSLSTTEAY SLR+SISEIKSSG NHPIIKPEVALMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLHHWISIQ
Subjt: QQANAIKTLDDTRAGMQQTKCSLSTTEAYYSLRKSISEIKSSGLNHPIIKPEVALMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLHHWISIQ
Query: ELLRHFWSSYPITTSYLYTKVSRLKDAMSKIYRQLEEIKETVLADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSVKSGERPNGYT
ELL+HFWSSYPITTSYLYTKVSRLKDAMSKIYRQLEEIKETV+ADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSVKSGER NGYT
Subjt: ELLRHFWSSYPITTSYLYTKVSRLKDAMSKIYRQLEEIKETVLADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSVKSGERPNGYT
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| XP_016902111.1 PREDICTED: probable RNA polymerase II transcription factor B subunit 1-1 isoform X2 [Cucumis melo] | 5.2e-131 | 88.15 | Show/hide |
Query: GKEQSKSWTSMRSQSQRMPSSQRTKAVVVVLKADT-DVDLEDPRTVAEALVRSRHAVEGNEKQTALDRISRMTAIEDLQASHSHPFAPLCIKDPRDYFDA
GKE ++ S +R S + VVL+ T DVDLEDPRTVAEALVRSRHAVEGNE+QTALDRISRMTAIEDLQA HSHPFAPLCIKDPRDYFDA
Subjt: GKEQSKSWTSMRSQSQRMPSSQRTKAVVVVLKADT-DVDLEDPRTVAEALVRSRHAVEGNEKQTALDRISRMTAIEDLQASHSHPFAPLCIKDPRDYFDA
Query: QQANAIKTLDDTRAGMQQTKCSLSTTEAYYSLRKSISEIKSSGLNHPIIKPEVALMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLHHWISIQ
QQANAIKTLDDTRAGMQQTKCSLSTTEAY SLR+SISEIKSSG NHPIIKPEVALMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLHHWISIQ
Subjt: QQANAIKTLDDTRAGMQQTKCSLSTTEAYYSLRKSISEIKSSGLNHPIIKPEVALMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLHHWISIQ
Query: ELLRHFWSSYPITTSYLYTKVSRLKDAMSKIYRQLEEIKETVLADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSVKSGERPNGYT
ELL+HFWSSYPITTSYLYTKVSRLKDAMSKIYRQLEEIKETV+ADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSVKSGER NGYT
Subjt: ELLRHFWSSYPITTSYLYTKVSRLKDAMSKIYRQLEEIKETVLADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSVKSGERPNGYT
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| XP_016902113.1 PREDICTED: probable RNA polymerase II transcription factor B subunit 1-1 isoform X4 [Cucumis melo] | 5.2e-131 | 88.15 | Show/hide |
Query: GKEQSKSWTSMRSQSQRMPSSQRTKAVVVVLKADT-DVDLEDPRTVAEALVRSRHAVEGNEKQTALDRISRMTAIEDLQASHSHPFAPLCIKDPRDYFDA
GKE ++ S +R S + VVL+ T DVDLEDPRTVAEALVRSRHAVEGNE+QTALDRISRMTAIEDLQA HSHPFAPLCIKDPRDYFDA
Subjt: GKEQSKSWTSMRSQSQRMPSSQRTKAVVVVLKADT-DVDLEDPRTVAEALVRSRHAVEGNEKQTALDRISRMTAIEDLQASHSHPFAPLCIKDPRDYFDA
Query: QQANAIKTLDDTRAGMQQTKCSLSTTEAYYSLRKSISEIKSSGLNHPIIKPEVALMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLHHWISIQ
QQANAIKTLDDTRAGMQQTKCSLSTTEAY SLR+SISEIKSSG NHPIIKPEVALMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLHHWISIQ
Subjt: QQANAIKTLDDTRAGMQQTKCSLSTTEAYYSLRKSISEIKSSGLNHPIIKPEVALMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLHHWISIQ
Query: ELLRHFWSSYPITTSYLYTKVSRLKDAMSKIYRQLEEIKETVLADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSVKSGERPNGYT
ELL+HFWSSYPITTSYLYTKVSRLKDAMSKIYRQLEEIKETV+ADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSVKSGER NGYT
Subjt: ELLRHFWSSYPITTSYLYTKVSRLKDAMSKIYRQLEEIKETVLADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSVKSGERPNGYT
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| XP_038894178.1 general transcription and DNA repair factor IIH subunit TFB1-1-like isoform X1 [Benincasa hispida] | 2.8e-132 | 88.85 | Show/hide |
Query: GKEQSKSWTSMRSQSQRMPSSQRTKAVVVVLKADT-DVDLEDPRTVAEALVRSRHAVEGNEKQTALDRISRMTAIEDLQASHSHPFAPLCIKDPRDYFDA
GKE ++ S +R S + VVL+ T DVDLEDPRTVAEALV+SRHAVEGNEKQTALDRISRMTAIEDLQ HSHPFAPLCIKDPRDYFDA
Subjt: GKEQSKSWTSMRSQSQRMPSSQRTKAVVVVLKADT-DVDLEDPRTVAEALVRSRHAVEGNEKQTALDRISRMTAIEDLQASHSHPFAPLCIKDPRDYFDA
Query: QQANAIKTLDDTRAGMQQTKCSLSTTEAYYSLRKSISEIKSSGLNHPIIKPEVALMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLHHWISIQ
QQANAIKTLDDTRAGMQQTKCSLSTTEAY SLR+SISEIKSSGLNHPIIKPEVALMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLHHWISIQ
Subjt: QQANAIKTLDDTRAGMQQTKCSLSTTEAYYSLRKSISEIKSSGLNHPIIKPEVALMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLHHWISIQ
Query: ELLRHFWSSYPITTSYLYTKVSRLKDAMSKIYRQLEEIKETVLADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSVKSGERPNGYT
ELLRHFWSSYPITTSYLYTKVSRLKDAMSKIYRQLEEIKETV+ADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSVKSGERPNGYT
Subjt: ELLRHFWSSYPITTSYLYTKVSRLKDAMSKIYRQLEEIKETVLADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSVKSGERPNGYT
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| XP_038894197.1 general transcription and DNA repair factor IIH subunit TFB1-1-like isoform X5 [Benincasa hispida] | 2.8e-132 | 88.85 | Show/hide |
Query: GKEQSKSWTSMRSQSQRMPSSQRTKAVVVVLKADT-DVDLEDPRTVAEALVRSRHAVEGNEKQTALDRISRMTAIEDLQASHSHPFAPLCIKDPRDYFDA
GKE ++ S +R S + VVL+ T DVDLEDPRTVAEALV+SRHAVEGNEKQTALDRISRMTAIEDLQ HSHPFAPLCIKDPRDYFDA
Subjt: GKEQSKSWTSMRSQSQRMPSSQRTKAVVVVLKADT-DVDLEDPRTVAEALVRSRHAVEGNEKQTALDRISRMTAIEDLQASHSHPFAPLCIKDPRDYFDA
Query: QQANAIKTLDDTRAGMQQTKCSLSTTEAYYSLRKSISEIKSSGLNHPIIKPEVALMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLHHWISIQ
QQANAIKTLDDTRAGMQQTKCSLSTTEAY SLR+SISEIKSSGLNHPIIKPEVALMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLHHWISIQ
Subjt: QQANAIKTLDDTRAGMQQTKCSLSTTEAYYSLRKSISEIKSSGLNHPIIKPEVALMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLHHWISIQ
Query: ELLRHFWSSYPITTSYLYTKVSRLKDAMSKIYRQLEEIKETVLADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSVKSGERPNGYT
ELLRHFWSSYPITTSYLYTKVSRLKDAMSKIYRQLEEIKETV+ADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSVKSGERPNGYT
Subjt: ELLRHFWSSYPITTSYLYTKVSRLKDAMSKIYRQLEEIKETVLADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSVKSGERPNGYT
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A1S3C6E8 probable RNA polymerase II transcription factor B subunit 1-1 isoform X1 | 2.5e-131 | 88.15 | Show/hide |
Query: GKEQSKSWTSMRSQSQRMPSSQRTKAVVVVLKADT-DVDLEDPRTVAEALVRSRHAVEGNEKQTALDRISRMTAIEDLQASHSHPFAPLCIKDPRDYFDA
GKE ++ S +R S + VVL+ T DVDLEDPRTVAEALVRSRHAVEGNE+QTALDRISRMTAIEDLQA HSHPFAPLCIKDPRDYFDA
Subjt: GKEQSKSWTSMRSQSQRMPSSQRTKAVVVVLKADT-DVDLEDPRTVAEALVRSRHAVEGNEKQTALDRISRMTAIEDLQASHSHPFAPLCIKDPRDYFDA
Query: QQANAIKTLDDTRAGMQQTKCSLSTTEAYYSLRKSISEIKSSGLNHPIIKPEVALMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLHHWISIQ
QQANAIKTLDDTRAGMQQTKCSLSTTEAY SLR+SISEIKSSG NHPIIKPEVALMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLHHWISIQ
Subjt: QQANAIKTLDDTRAGMQQTKCSLSTTEAYYSLRKSISEIKSSGLNHPIIKPEVALMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLHHWISIQ
Query: ELLRHFWSSYPITTSYLYTKVSRLKDAMSKIYRQLEEIKETVLADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSVKSGERPNGYT
ELL+HFWSSYPITTSYLYTKVSRLKDAMSKIYRQLEEIKETV+ADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSVKSGER NGYT
Subjt: ELLRHFWSSYPITTSYLYTKVSRLKDAMSKIYRQLEEIKETVLADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSVKSGERPNGYT
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| A0A1S4E1K9 probable RNA polymerase II transcription factor B subunit 1-1 isoform X2 | 2.5e-131 | 88.15 | Show/hide |
Query: GKEQSKSWTSMRSQSQRMPSSQRTKAVVVVLKADT-DVDLEDPRTVAEALVRSRHAVEGNEKQTALDRISRMTAIEDLQASHSHPFAPLCIKDPRDYFDA
GKE ++ S +R S + VVL+ T DVDLEDPRTVAEALVRSRHAVEGNE+QTALDRISRMTAIEDLQA HSHPFAPLCIKDPRDYFDA
Subjt: GKEQSKSWTSMRSQSQRMPSSQRTKAVVVVLKADT-DVDLEDPRTVAEALVRSRHAVEGNEKQTALDRISRMTAIEDLQASHSHPFAPLCIKDPRDYFDA
Query: QQANAIKTLDDTRAGMQQTKCSLSTTEAYYSLRKSISEIKSSGLNHPIIKPEVALMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLHHWISIQ
QQANAIKTLDDTRAGMQQTKCSLSTTEAY SLR+SISEIKSSG NHPIIKPEVALMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLHHWISIQ
Subjt: QQANAIKTLDDTRAGMQQTKCSLSTTEAYYSLRKSISEIKSSGLNHPIIKPEVALMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLHHWISIQ
Query: ELLRHFWSSYPITTSYLYTKVSRLKDAMSKIYRQLEEIKETVLADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSVKSGERPNGYT
ELL+HFWSSYPITTSYLYTKVSRLKDAMSKIYRQLEEIKETV+ADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSVKSGER NGYT
Subjt: ELLRHFWSSYPITTSYLYTKVSRLKDAMSKIYRQLEEIKETVLADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSVKSGERPNGYT
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| A0A1S4E1L0 probable RNA polymerase II transcription factor B subunit 1-1 isoform X3 | 2.5e-131 | 88.15 | Show/hide |
Query: GKEQSKSWTSMRSQSQRMPSSQRTKAVVVVLKADT-DVDLEDPRTVAEALVRSRHAVEGNEKQTALDRISRMTAIEDLQASHSHPFAPLCIKDPRDYFDA
GKE ++ S +R S + VVL+ T DVDLEDPRTVAEALVRSRHAVEGNE+QTALDRISRMTAIEDLQA HSHPFAPLCIKDPRDYFDA
Subjt: GKEQSKSWTSMRSQSQRMPSSQRTKAVVVVLKADT-DVDLEDPRTVAEALVRSRHAVEGNEKQTALDRISRMTAIEDLQASHSHPFAPLCIKDPRDYFDA
Query: QQANAIKTLDDTRAGMQQTKCSLSTTEAYYSLRKSISEIKSSGLNHPIIKPEVALMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLHHWISIQ
QQANAIKTLDDTRAGMQQTKCSLSTTEAY SLR+SISEIKSSG NHPIIKPEVALMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLHHWISIQ
Subjt: QQANAIKTLDDTRAGMQQTKCSLSTTEAYYSLRKSISEIKSSGLNHPIIKPEVALMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLHHWISIQ
Query: ELLRHFWSSYPITTSYLYTKVSRLKDAMSKIYRQLEEIKETVLADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSVKSGERPNGYT
ELL+HFWSSYPITTSYLYTKVSRLKDAMSKIYRQLEEIKETV+ADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSVKSGER NGYT
Subjt: ELLRHFWSSYPITTSYLYTKVSRLKDAMSKIYRQLEEIKETVLADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSVKSGERPNGYT
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| A0A1S4E1L2 probable RNA polymerase II transcription factor B subunit 1-1 isoform X4 | 2.5e-131 | 88.15 | Show/hide |
Query: GKEQSKSWTSMRSQSQRMPSSQRTKAVVVVLKADT-DVDLEDPRTVAEALVRSRHAVEGNEKQTALDRISRMTAIEDLQASHSHPFAPLCIKDPRDYFDA
GKE ++ S +R S + VVL+ T DVDLEDPRTVAEALVRSRHAVEGNE+QTALDRISRMTAIEDLQA HSHPFAPLCIKDPRDYFDA
Subjt: GKEQSKSWTSMRSQSQRMPSSQRTKAVVVVLKADT-DVDLEDPRTVAEALVRSRHAVEGNEKQTALDRISRMTAIEDLQASHSHPFAPLCIKDPRDYFDA
Query: QQANAIKTLDDTRAGMQQTKCSLSTTEAYYSLRKSISEIKSSGLNHPIIKPEVALMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLHHWISIQ
QQANAIKTLDDTRAGMQQTKCSLSTTEAY SLR+SISEIKSSG NHPIIKPEVALMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLHHWISIQ
Subjt: QQANAIKTLDDTRAGMQQTKCSLSTTEAYYSLRKSISEIKSSGLNHPIIKPEVALMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLHHWISIQ
Query: ELLRHFWSSYPITTSYLYTKVSRLKDAMSKIYRQLEEIKETVLADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSVKSGERPNGYT
ELL+HFWSSYPITTSYLYTKVSRLKDAMSKIYRQLEEIKETV+ADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSVKSGER NGYT
Subjt: ELLRHFWSSYPITTSYLYTKVSRLKDAMSKIYRQLEEIKETVLADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSVKSGERPNGYT
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| A0A6J1EXP7 probable RNA polymerase II transcription factor B subunit 1-1 | 5.6e-131 | 88.15 | Show/hide |
Query: GKEQSKSWTSMRSQSQRMPSSQRTKAVVVVLKADT-DVDLEDPRTVAEALVRSRHAVEGNEKQTALDRISRMTAIEDLQASHSHPFAPLCIKDPRDYFDA
GKE ++ S Q +R S + VVL+ T DVDLEDPRTVAEALVRSRHAVEGNEKQ LDRI+RMTAIEDLQA HS+PFAPLCIKDPRDYFDA
Subjt: GKEQSKSWTSMRSQSQRMPSSQRTKAVVVVLKADT-DVDLEDPRTVAEALVRSRHAVEGNEKQTALDRISRMTAIEDLQASHSHPFAPLCIKDPRDYFDA
Query: QQANAIKTLDDTRAGMQQTKCSLSTTEAYYSLRKSISEIKSSGLNHPIIKPEVALMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLHHWISIQ
QQANAIKTLDDTRAGMQQTKCSLSTTEAY SLR+SISEIKSSGLNHPIIKPEVALMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLHHWISIQ
Subjt: QQANAIKTLDDTRAGMQQTKCSLSTTEAYYSLRKSISEIKSSGLNHPIIKPEVALMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLHHWISIQ
Query: ELLRHFWSSYPITTSYLYTKVSRLKDAMSKIYRQLEEIKETVLADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSVKSGERPNGYT
ELLRHFWSSYPITTSYLYTKVSRLKDAMSKIYRQLEEIKETV ADFRHQVSLLVRPMHQALDAAFQHHDADLQKRS KSGERPNGYT
Subjt: ELLRHFWSSYPITTSYLYTKVSRLKDAMSKIYRQLEEIKETVLADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSVKSGERPNGYT
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| F4J4Y5 Probable mediator of RNA polymerase II transcription subunit 26a | 1.6e-13 | 29.85 | Show/hide |
Query: LDLDDFRTILDTAGVDVWTFIDTAMEVASLDYGNQLKNRRDGIVERLYALTSPPSRCRNCE-TDRNHDGRSNGCEIKQSSGEVKGASPSTLQFVVVEGDD
+ LD +R D++ ID A+ VA+ D+ + K+R D I E L+ + SRC C+ + + G EI G G EG++
Subjt: LDLDDFRTILDTAGVDVWTFIDTAMEVASLDYGNQLKNRRDGIVERLYALTSPPSRCRNCE-TDRNHDGRSNGCEIKQSSGEVKGASPSTLQFVVVEGDD
Query: DGVDPYAGLFDDEQKKVLEIKEQLEIPHQPEDALVELLQNLADMDITFQALKETDIGRHVNRLRKHSSNDVRRLVKHLVRKWKEIVDEWVRLNQPGEQTA
A + DE ++ +I + + + L+E L+ L M ++ LK+T+IG+ VN LR+HSS+ + +L K L +WK +VD+W +N P E
Subjt: DGVDPYAGLFDDEQKKVLEIKEQLEIPHQPEDALVELLQNLADMDITFQALKETDIGRHVNRLRKHSSNDVRRLVKHLVRKWKEIVDEWVRLNQPGEQTA
Query: T
T
Subjt: T
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| F4KFC7 Probable mediator of RNA polymerase II transcription subunit 26c | 5.9e-61 | 58.99 | Show/hide |
Query: LDLDDFRTILDTAGVDVWTFIDTAMEVASLDYGNQLKNRRDGIVERLYALTSPPSRCRNCE-----------TDRNHDGR-SNGCEIKQSSGEVKGASPS
+DLDDFR+++D AGVDVWTFIDTA+ VASLDYG +LK RRD IVERLYA TS ++CRNC+ R ++GR E + G A
Subjt: LDLDDFRTILDTAGVDVWTFIDTAMEVASLDYGNQLKNRRDGIVERLYALTSPPSRCRNCE-----------TDRNHDGR-SNGCEIKQSSGEVKGASPS
Query: TLQFVVVEGDDDGVDPYAGLFDDEQKKVLEIKEQLEIPHQPEDALVELLQNLADMDITFQALKETDIGRHVNRLRKHSSNDVRRLVKHLVRKWKEIVDEW
+ V DDD DP+AGLFDDEQK ++EIKE+LE P E++LVELLQNL DMDITFQAL+ETDIGRHVNR+RKH SN+VRRL K LV+KWKE VDEW
Subjt: TLQFVVVEGDDDGVDPYAGLFDDEQKKVLEIKEQLEIPHQPEDALVELLQNLADMDITFQALKETDIGRHVNRLRKHSSNDVRRLVKHLVRKWKEIVDEW
Query: VRLNQPGE-QTATLLAD
V+ NQPG+ + +L+AD
Subjt: VRLNQPGE-QTATLLAD
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| Q3ECP0 General transcription and DNA repair factor IIH subunit TFB1-1 | 6.3e-71 | 53.76 | Show/hide |
Query: AVVVVLKADTDVDLEDPRTVAEALVRSRHAVEG------NEKQTALDRISRMTAIEDLQASHSHPFAPLCIKDPRDYFDAQQANAIKTLDDTRAGMQQTK
A VV+ DV+ ED R VAEAL R + + + Q L+R+SR+ +EDLQA + P APL IKDPRDYF++QQ N + + G+++
Subjt: AVVVVLKADTDVDLEDPRTVAEALVRSRHAVEG------NEKQTALDRISRMTAIEDLQASHSHPFAPLCIKDPRDYFDAQQANAIKTLDDTRAGMQQTK
Query: CSLSTTEAYYSLRKSISEIKSSGLNHPIIKPEVALMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLHHWISIQELLRHFWSSYPITTSYLYTK
+ EAY L++SI EI+++GL+ P+IKPEV+ V++ LT+ I++ K GKNP+ES L+ LP TK+E+LHHW SIQELL+HFWSSYPITT+YL+TK
Subjt: CSLSTTEAYYSLRKSISEIKSSGLNHPIIKPEVALMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLHHWISIQELLRHFWSSYPITTSYLYTK
Query: VSRLKDAMSKIYRQLEEIKETVLADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSVKSGERPNGY
V +LKDAMS Y +LE +KE+V +D RHQVSLLVRPM QALDAAF H++ DLQ+R+ KSGERPNGY
Subjt: VSRLKDAMSKIYRQLEEIKETVLADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSVKSGERPNGY
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| Q9FHK9 Probable mediator of RNA polymerase II transcription subunit 26b | 7.6e-16 | 32.09 | Show/hide |
Query: LDDFRTILDTAG-VDVWTFIDTAMEVASLDYGNQLKNRRDGIVERLYALTSPPSRCRNC-----------ETDRNHDGRSNGCEIKQSSGEVKGASP---
LD +R G D++ ID A+ VA+ D N+ K+RRD I E L++ +RC C E +R G G EV G S
Subjt: LDDFRTILDTAG-VDVWTFIDTAMEVASLDYGNQLKNRRDGIVERLYALTSPPSRCRNC-----------ETDRNHDGRSNGCEIKQSSGEVKGASP---
Query: ------------STLQFVVVEGDDDGVDPYAGLFDDEQKKVLEIKE-QLEIPHQPEDALVELLQNLADMDITFQALKETDIGRHVNRLRKHSSNDVRRLV
S F E D ++ ++ + K+V IKE L +P L++ L++L M + LK T+IG+ VN LRKHSS+ +R+L
Subjt: ------------STLQFVVVEGDDDGVDPYAGLFDDEQKKVLEIKE-QLEIPHQPEDALVELLQNLADMDITFQALKETDIGRHVNRLRKHSSNDVRRLV
Query: KHLVRKWKEIVDEWV
K L+ +WKE+VD+WV
Subjt: KHLVRKWKEIVDEWV
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| Q9M322 General transcription and DNA repair factor IIH subunit TFB1-3 | 4.0e-65 | 52.33 | Show/hide |
Query: AVVVVLKADTDVDLEDPRTVAEALVRSRHA------VEGNEKQTALDRISRMTAIEDLQASHSHPFAPLCIKDPRDYFDAQQANAIKTLDDTRAGMQQTK
A VV+ +V ED R VAEAL R++ + + Q L+R+SR T +EDLQA + P APL IKDPRDYF++QQ N + +A +
Subjt: AVVVVLKADTDVDLEDPRTVAEALVRSRHA------VEGNEKQTALDRISRMTAIEDLQASHSHPFAPLCIKDPRDYFDAQQANAIKTLDDTRAGMQQTK
Query: CSLSTTEAYYSLRKSISEIKSSGLNHPIIKPEVALMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLHHWISIQELLRHFWSSYPITTSYLYTK
+ EAY L++SI I+ +GL+ P+IKPEV+ V++ LT+ IS+ K LGKNPQES L+ LP TK+E++HHW SIQEL+RHFWSSYPITT+YL TK
Subjt: CSLSTTEAYYSLRKSISEIKSSGLNHPIIKPEVALMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLHHWISIQELLRHFWSSYPITTSYLYTK
Query: VSRLKDAMSKIYRQLEEIKETVLADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSVK
V +LKDAMS Y L+ +K++V +D RHQVSLLVRPM QALDAAFQH+++DLQ+R+ K
Subjt: VSRLKDAMSKIYRQLEEIKETVLADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSVK
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT1G55750.1 BSD domain (BTF2-like transcription factors, Synapse-associated proteins and DOS2-like proteins) | 4.5e-72 | 53.76 | Show/hide |
Query: AVVVVLKADTDVDLEDPRTVAEALVRSRHAVEG------NEKQTALDRISRMTAIEDLQASHSHPFAPLCIKDPRDYFDAQQANAIKTLDDTRAGMQQTK
A VV+ DV+ ED R VAEAL R + + + Q L+R+SR+ +EDLQA + P APL IKDPRDYF++QQ N + + G+++
Subjt: AVVVVLKADTDVDLEDPRTVAEALVRSRHAVEG------NEKQTALDRISRMTAIEDLQASHSHPFAPLCIKDPRDYFDAQQANAIKTLDDTRAGMQQTK
Query: CSLSTTEAYYSLRKSISEIKSSGLNHPIIKPEVALMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLHHWISIQELLRHFWSSYPITTSYLYTK
+ EAY L++SI EI+++GL+ P+IKPEV+ V++ LT+ I++ K GKNP+ES L+ LP TK+E+LHHW SIQELL+HFWSSYPITT+YL+TK
Subjt: CSLSTTEAYYSLRKSISEIKSSGLNHPIIKPEVALMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLHHWISIQELLRHFWSSYPITTSYLYTK
Query: VSRLKDAMSKIYRQLEEIKETVLADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSVKSGERPNGY
V +LKDAMS Y +LE +KE+V +D RHQVSLLVRPM QALDAAF H++ DLQ+R+ KSGERPNGY
Subjt: VSRLKDAMSKIYRQLEEIKETVLADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSVKSGERPNGY
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| AT3G10820.1 Transcription elongation factor (TFIIS) family protein | 1.1e-14 | 29.85 | Show/hide |
Query: LDLDDFRTILDTAGVDVWTFIDTAMEVASLDYGNQLKNRRDGIVERLYALTSPPSRCRNCE-TDRNHDGRSNGCEIKQSSGEVKGASPSTLQFVVVEGDD
+ LD +R D++ ID A+ VA+ D+ + K+R D I E L+ + SRC C+ + + G EI G G EG++
Subjt: LDLDDFRTILDTAGVDVWTFIDTAMEVASLDYGNQLKNRRDGIVERLYALTSPPSRCRNCE-TDRNHDGRSNGCEIKQSSGEVKGASPSTLQFVVVEGDD
Query: DGVDPYAGLFDDEQKKVLEIKEQLEIPHQPEDALVELLQNLADMDITFQALKETDIGRHVNRLRKHSSNDVRRLVKHLVRKWKEIVDEWVRLNQPGEQTA
A + DE ++ +I + + + L+E L+ L M ++ LK+T+IG+ VN LR+HSS+ + +L K L +WK +VD+W +N P E
Subjt: DGVDPYAGLFDDEQKKVLEIKEQLEIPHQPEDALVELLQNLADMDITFQALKETDIGRHVNRLRKHSSNDVRRLVKHLVRKWKEIVDEWVRLNQPGEQTA
Query: T
T
Subjt: T
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| AT3G61420.1 BSD domain (BTF2-like transcription factors, Synapse-associated proteins and DOS2-like proteins) | 2.8e-66 | 52.33 | Show/hide |
Query: AVVVVLKADTDVDLEDPRTVAEALVRSRHA------VEGNEKQTALDRISRMTAIEDLQASHSHPFAPLCIKDPRDYFDAQQANAIKTLDDTRAGMQQTK
A VV+ +V ED R VAEAL R++ + + Q L+R+SR T +EDLQA + P APL IKDPRDYF++QQ N + +A +
Subjt: AVVVVLKADTDVDLEDPRTVAEALVRSRHA------VEGNEKQTALDRISRMTAIEDLQASHSHPFAPLCIKDPRDYFDAQQANAIKTLDDTRAGMQQTK
Query: CSLSTTEAYYSLRKSISEIKSSGLNHPIIKPEVALMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLHHWISIQELLRHFWSSYPITTSYLYTK
+ EAY L++SI I+ +GL+ P+IKPEV+ V++ LT+ IS+ K LGKNPQES L+ LP TK+E++HHW SIQEL+RHFWSSYPITT+YL TK
Subjt: CSLSTTEAYYSLRKSISEIKSSGLNHPIIKPEVALMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLHHWISIQELLRHFWSSYPITTSYLYTK
Query: VSRLKDAMSKIYRQLEEIKETVLADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSVK
V +LKDAMS Y L+ +K++V +D RHQVSLLVRPM QALDAAFQH+++DLQ+R+ K
Subjt: VSRLKDAMSKIYRQLEEIKETVLADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSVK
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| AT5G05140.1 Transcription elongation factor (TFIIS) family protein | 5.4e-17 | 32.09 | Show/hide |
Query: LDDFRTILDTAG-VDVWTFIDTAMEVASLDYGNQLKNRRDGIVERLYALTSPPSRCRNC-----------ETDRNHDGRSNGCEIKQSSGEVKGASP---
LD +R G D++ ID A+ VA+ D N+ K+RRD I E L++ +RC C E +R G G EV G S
Subjt: LDDFRTILDTAG-VDVWTFIDTAMEVASLDYGNQLKNRRDGIVERLYALTSPPSRCRNC-----------ETDRNHDGRSNGCEIKQSSGEVKGASP---
Query: ------------STLQFVVVEGDDDGVDPYAGLFDDEQKKVLEIKE-QLEIPHQPEDALVELLQNLADMDITFQALKETDIGRHVNRLRKHSSNDVRRLV
S F E D ++ ++ + K+V IKE L +P L++ L++L M + LK T+IG+ VN LRKHSS+ +R+L
Subjt: ------------STLQFVVVEGDDDGVDPYAGLFDDEQKKVLEIKE-QLEIPHQPEDALVELLQNLADMDITFQALKETDIGRHVNRLRKHSSNDVRRLV
Query: KHLVRKWKEIVDEWV
K L+ +WKE+VD+WV
Subjt: KHLVRKWKEIVDEWV
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| AT5G09850.1 Transcription elongation factor (TFIIS) family protein | 4.2e-62 | 58.99 | Show/hide |
Query: LDLDDFRTILDTAGVDVWTFIDTAMEVASLDYGNQLKNRRDGIVERLYALTSPPSRCRNCE-----------TDRNHDGR-SNGCEIKQSSGEVKGASPS
+DLDDFR+++D AGVDVWTFIDTA+ VASLDYG +LK RRD IVERLYA TS ++CRNC+ R ++GR E + G A
Subjt: LDLDDFRTILDTAGVDVWTFIDTAMEVASLDYGNQLKNRRDGIVERLYALTSPPSRCRNCE-----------TDRNHDGR-SNGCEIKQSSGEVKGASPS
Query: TLQFVVVEGDDDGVDPYAGLFDDEQKKVLEIKEQLEIPHQPEDALVELLQNLADMDITFQALKETDIGRHVNRLRKHSSNDVRRLVKHLVRKWKEIVDEW
+ V DDD DP+AGLFDDEQK ++EIKE+LE P E++LVELLQNL DMDITFQAL+ETDIGRHVNR+RKH SN+VRRL K LV+KWKE VDEW
Subjt: TLQFVVVEGDDDGVDPYAGLFDDEQKKVLEIKEQLEIPHQPEDALVELLQNLADMDITFQALKETDIGRHVNRLRKHSSNDVRRLVKHLVRKWKEIVDEW
Query: VRLNQPGE-QTATLLAD
V+ NQPG+ + +L+AD
Subjt: VRLNQPGE-QTATLLAD
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