| GenBank top hits | e value | %identity | Alignment |
|---|
| XP_008457278.1 PREDICTED: probable RNA polymerase II transcription factor B subunit 1-1 isoform X1 [Cucumis melo] | 5.0e-177 | 93.04 | Show/hide |
Query: MGTKYVHRSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSTSKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
MGTKYVH+SAKYKTSVKDPGTPGVLEMTE KFVFRPSDPTS SKLDVEFRFIKGHKNTKEGSNKPPWLNLT+DQGGSYIFEFKNFSDLHVCREFVGSALA
Subjt: MGTKYVHRSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSTSKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
Query: KSGEAAQAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVISGVLTESEFWAARKKLLKRDSSKKSKQLIGFKSSMVLDTKPMSDGR-----
K GEAAQAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVI GVLTESEFWAARKKLL+RDSSKKSKQLIGFKSSMVLDTKPMSDGR
Subjt: KSGEAAQAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVISGVLTESEFWAARKKLLKRDSSKKSKQLIGFKSSMVLDTKPMSDGR-----
Query: ----------IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEADLGDDYT
IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAA+TRKKIRHVDPTLDLEADLGDDYT
Subjt: ----------IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEADLGDDYT
Query: HLPDHGIFRDGGKEITESQNEHYKRTLSQDLNRQGAVVLEGRTID
HLPDHGIFRDGGKEITESQNEHY+RTLSQDLNRQGAVVLEGRTID
Subjt: HLPDHGIFRDGGKEITESQNEHYKRTLSQDLNRQGAVVLEGRTID
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| XP_038894178.1 general transcription and DNA repair factor IIH subunit TFB1-1-like isoform X1 [Benincasa hispida] | 1.2e-175 | 92.17 | Show/hide |
Query: MGTKYVHRSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSTSKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
MGTKYVH+SAKYKTS+KDPGTPGVLEMTE KF+FRPSDPTS SKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGS IFEFKNFSDLHVCREFVGSALA
Subjt: MGTKYVHRSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSTSKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
Query: KSGEAAQAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVISGVLTESEFWAARKKLLKRDSSKKSKQLIGFKSSMVLDTKPMSDGR-----
KSGEAAQAP ERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVI GVLTESEFWAARKKLL+RD+SKKSKQLIGFKSSMVLDTKPMSDGR
Subjt: KSGEAAQAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVISGVLTESEFWAARKKLLKRDSSKKSKQLIGFKSSMVLDTKPMSDGR-----
Query: ----------IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEADLGDDYT
IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAE RKKIRHVDPTLDLEADLGDDYT
Subjt: ----------IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEADLGDDYT
Query: HLPDHGIFRDGGKEITESQNEHYKRTLSQDLNRQGAVVLEGRTID
HLPDHGIFRDGGKEITESQNEHY+RTLSQDLNRQGAVVLEGRTID
Subjt: HLPDHGIFRDGGKEITESQNEHYKRTLSQDLNRQGAVVLEGRTID
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| XP_038894194.1 general transcription and DNA repair factor IIH subunit TFB1-1-like isoform X2 [Benincasa hispida] | 1.2e-175 | 92.17 | Show/hide |
Query: MGTKYVHRSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSTSKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
MGTKYVH+SAKYKTS+KDPGTPGVLEMTE KF+FRPSDPTS SKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGS IFEFKNFSDLHVCREFVGSALA
Subjt: MGTKYVHRSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSTSKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
Query: KSGEAAQAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVISGVLTESEFWAARKKLLKRDSSKKSKQLIGFKSSMVLDTKPMSDGR-----
KSGEAAQAP ERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVI GVLTESEFWAARKKLL+RD+SKKSKQLIGFKSSMVLDTKPMSDGR
Subjt: KSGEAAQAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVISGVLTESEFWAARKKLLKRDSSKKSKQLIGFKSSMVLDTKPMSDGR-----
Query: ----------IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEADLGDDYT
IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAE RKKIRHVDPTLDLEADLGDDYT
Subjt: ----------IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEADLGDDYT
Query: HLPDHGIFRDGGKEITESQNEHYKRTLSQDLNRQGAVVLEGRTID
HLPDHGIFRDGGKEITESQNEHY+RTLSQDLNRQGAVVLEGRTID
Subjt: HLPDHGIFRDGGKEITESQNEHYKRTLSQDLNRQGAVVLEGRTID
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| XP_038894195.1 general transcription and DNA repair factor IIH subunit TFB1-1-like isoform X3 [Benincasa hispida] | 1.2e-175 | 92.17 | Show/hide |
Query: MGTKYVHRSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSTSKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
MGTKYVH+SAKYKTS+KDPGTPGVLEMTE KF+FRPSDPTS SKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGS IFEFKNFSDLHVCREFVGSALA
Subjt: MGTKYVHRSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSTSKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
Query: KSGEAAQAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVISGVLTESEFWAARKKLLKRDSSKKSKQLIGFKSSMVLDTKPMSDGR-----
KSGEAAQAP ERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVI GVLTESEFWAARKKLL+RD+SKKSKQLIGFKSSMVLDTKPMSDGR
Subjt: KSGEAAQAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVISGVLTESEFWAARKKLLKRDSSKKSKQLIGFKSSMVLDTKPMSDGR-----
Query: ----------IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEADLGDDYT
IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAE RKKIRHVDPTLDLEADLGDDYT
Subjt: ----------IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEADLGDDYT
Query: HLPDHGIFRDGGKEITESQNEHYKRTLSQDLNRQGAVVLEGRTID
HLPDHGIFRDGGKEITESQNEHY+RTLSQDLNRQGAVVLEGRTID
Subjt: HLPDHGIFRDGGKEITESQNEHYKRTLSQDLNRQGAVVLEGRTID
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| XP_038894196.1 general transcription and DNA repair factor IIH subunit TFB1-1-like isoform X4 [Benincasa hispida] | 1.2e-175 | 92.17 | Show/hide |
Query: MGTKYVHRSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSTSKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
MGTKYVH+SAKYKTS+KDPGTPGVLEMTE KF+FRPSDPTS SKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGS IFEFKNFSDLHVCREFVGSALA
Subjt: MGTKYVHRSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSTSKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
Query: KSGEAAQAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVISGVLTESEFWAARKKLLKRDSSKKSKQLIGFKSSMVLDTKPMSDGR-----
KSGEAAQAP ERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVI GVLTESEFWAARKKLL+RD+SKKSKQLIGFKSSMVLDTKPMSDGR
Subjt: KSGEAAQAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVISGVLTESEFWAARKKLLKRDSSKKSKQLIGFKSSMVLDTKPMSDGR-----
Query: ----------IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEADLGDDYT
IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAE RKKIRHVDPTLDLEADLGDDYT
Subjt: ----------IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEADLGDDYT
Query: HLPDHGIFRDGGKEITESQNEHYKRTLSQDLNRQGAVVLEGRTID
HLPDHGIFRDGGKEITESQNEHY+RTLSQDLNRQGAVVLEGRTID
Subjt: HLPDHGIFRDGGKEITESQNEHYKRTLSQDLNRQGAVVLEGRTID
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A1S3C6E8 probable RNA polymerase II transcription factor B subunit 1-1 isoform X1 | 2.4e-177 | 93.04 | Show/hide |
Query: MGTKYVHRSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSTSKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
MGTKYVH+SAKYKTSVKDPGTPGVLEMTE KFVFRPSDPTS SKLDVEFRFIKGHKNTKEGSNKPPWLNLT+DQGGSYIFEFKNFSDLHVCREFVGSALA
Subjt: MGTKYVHRSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSTSKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
Query: KSGEAAQAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVISGVLTESEFWAARKKLLKRDSSKKSKQLIGFKSSMVLDTKPMSDGR-----
K GEAAQAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVI GVLTESEFWAARKKLL+RDSSKKSKQLIGFKSSMVLDTKPMSDGR
Subjt: KSGEAAQAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVISGVLTESEFWAARKKLLKRDSSKKSKQLIGFKSSMVLDTKPMSDGR-----
Query: ----------IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEADLGDDYT
IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAA+TRKKIRHVDPTLDLEADLGDDYT
Subjt: ----------IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEADLGDDYT
Query: HLPDHGIFRDGGKEITESQNEHYKRTLSQDLNRQGAVVLEGRTID
HLPDHGIFRDGGKEITESQNEHY+RTLSQDLNRQGAVVLEGRTID
Subjt: HLPDHGIFRDGGKEITESQNEHYKRTLSQDLNRQGAVVLEGRTID
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| A0A6J1DNY2 probable RNA polymerase II transcription factor B subunit 1-1 isoform X2 | 3.4e-171 | 89.86 | Show/hide |
Query: MGTKYVHRSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSTSKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
MGTKYV +SAKYKTSVKDPGTPGVLEMTERKFVF+PSDPTS SKLDVEFR+IKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
Subjt: MGTKYVHRSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSTSKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
Query: KSGEAAQAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVISGVLTESEFWAARKKLLKRDSSKKSKQLIGFKSSMVLDTKPMSDGR-----
KSGE AQA SER VA FPHEQLSK EMELRM+CLQEDSELQKLHKQFVI GVLTESEFWAARKKLL+RD+SKKSKQL+GFK+SMVLDTKPMSDGR
Subjt: KSGEAAQAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVISGVLTESEFWAARKKLLKRDSSKKSKQLIGFKSSMVLDTKPMSDGR-----
Query: ----------IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEADLGDDYT
IFALKPAVHQAFL+HVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEADLGDDYT
Subjt: ----------IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEADLGDDYT
Query: HLPDHGIFRDGGKEITESQNEHYKRTLSQDLNRQGAVVLEGRTID
HLPDHGIFRDGGKEITES NE Y+RTLSQDLNRQGAVVLEGRTID
Subjt: HLPDHGIFRDGGKEITESQNEHYKRTLSQDLNRQGAVVLEGRTID
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| A0A6J1DRT9 probable RNA polymerase II transcription factor B subunit 1-1 isoform X1 | 3.4e-171 | 89.86 | Show/hide |
Query: MGTKYVHRSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSTSKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
MGTKYV +SAKYKTSVKDPGTPGVLEMTERKFVF+PSDPTS SKLDVEFR+IKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
Subjt: MGTKYVHRSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSTSKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
Query: KSGEAAQAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVISGVLTESEFWAARKKLLKRDSSKKSKQLIGFKSSMVLDTKPMSDGR-----
KSGE AQA SER VA FPHEQLSK EMELRM+CLQEDSELQKLHKQFVI GVLTESEFWAARKKLL+RD+SKKSKQL+GFK+SMVLDTKPMSDGR
Subjt: KSGEAAQAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVISGVLTESEFWAARKKLLKRDSSKKSKQLIGFKSSMVLDTKPMSDGR-----
Query: ----------IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEADLGDDYT
IFALKPAVHQAFL+HVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEADLGDDYT
Subjt: ----------IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEADLGDDYT
Query: HLPDHGIFRDGGKEITESQNEHYKRTLSQDLNRQGAVVLEGRTID
HLPDHGIFRDGGKEITES NE Y+RTLSQDLNRQGAVVLEGRTID
Subjt: HLPDHGIFRDGGKEITESQNEHYKRTLSQDLNRQGAVVLEGRTID
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| A0A6J1EXP7 probable RNA polymerase II transcription factor B subunit 1-1 | 3.4e-171 | 90.72 | Show/hide |
Query: MGTKYVHRSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSTSKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
MGTKYV +SAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTS SKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
Subjt: MGTKYVHRSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSTSKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
Query: KSGEAAQAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVISGVLTESEFWAARKKLLKRDSSKKSKQLIGFKSSMVLDTKPMSDGR-----
KSGEA QAPSE+ VA FPHEQLSKSEMELRMRCLQEDSELQKLHKQFVI GVLTESEFWAARKKLL+RD S KSKQL+GFKSSMVLDTKPMSDGR
Subjt: KSGEAAQAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVISGVLTESEFWAARKKLLKRDSSKKSKQLIGFKSSMVLDTKPMSDGR-----
Query: ----------IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEADLGDDYT
IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIR VDPTLDLEADLGDDYT
Subjt: ----------IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEADLGDDYT
Query: HLPDHGIFRDGGKEITESQNEHYKRTLSQDLNRQGAVVLEGRTID
HLPDHGIFRDGGKEITES NE +RTLSQDLNRQGAVVLEGRTID
Subjt: HLPDHGIFRDGGKEITESQNEHYKRTLSQDLNRQGAVVLEGRTID
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| A0A6J1IB04 probable RNA polymerase II transcription factor B subunit 1-1 | 1.7e-170 | 90.43 | Show/hide |
Query: MGTKYVHRSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSTSKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
MGTKYV +SAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTS SKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
Subjt: MGTKYVHRSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSTSKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
Query: KSGEAAQAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVISGVLTESEFWAARKKLLKRDSSKKSKQLIGFKSSMVLDTKPMSDGR-----
KSGEA QAPSE+ VA FPHEQLSKSEMELRMRCLQEDSELQKLHKQFVI GVLTESEFWAARKKLL+RD S KSKQL+GFKSSMVLDTKPMSDGR
Subjt: KSGEAAQAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVISGVLTESEFWAARKKLLKRDSSKKSKQLIGFKSSMVLDTKPMSDGR-----
Query: ----------IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEADLGDDYT
IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIR VDPTLDLEADLGDDY
Subjt: ----------IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEADLGDDYT
Query: HLPDHGIFRDGGKEITESQNEHYKRTLSQDLNRQGAVVLEGRTID
HLPDHGIFRDGGKEITES NE +RTLSQDLNRQGAVVLEGRTID
Subjt: HLPDHGIFRDGGKEITESQNEHYKRTLSQDLNRQGAVVLEGRTID
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P32780 General transcription factor IIH subunit 1 | 2.5e-14 | 27.76 | Show/hide |
Query: IKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALAKSGEAAQAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVISG
IK K + EG K L L G + F F N S K +A + ++ + F ++ + E+E + R LQED L +L+K V+S
Subjt: IKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALAKSGEAAQAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVISG
Query: VLTESEFWAARKKLLKRDSSKKS--KQLIGFKSSMVLDTKPMSDG--------------RIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKN
V++ EFWA R + DSS S KQ +G ++ + D +P +DG IF PAV + +VP+ M+EK+FWT++F++ Y H +
Subjt: VLTESEFWAARKKLLKRDSSKKS--KQLIGFKSSMVLDTKPMSDG--------------RIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKN
Query: SIAAA---AEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEA------DLGDDYTHLP----DHGIFRDGGKEITESQNEHYKRTLSQDLNRQGA
+ + AE A+ +E L +T + +P LDL A D G + +P I + I + N H L+ L +Q A
Subjt: SIAAA---AEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEA------DLGDDYTHLP----DHGIFRDGGKEITESQNEHYKRTLSQDLNRQGA
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| Q3ECP0 General transcription and DNA repair factor IIH subunit TFB1-1 | 3.9e-108 | 60.4 | Show/hide |
Query: VHRSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSTSKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALAKSGEA
+ + KYK++VKDPGTPG L + E +F P+DP S SKL V + IK K TKEGSNKPPWLNLT Q S+IFEF+N+ D+H CR+F+ ALAK
Subjt: VHRSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSTSKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALAKSGEA
Query: AQAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVISGVLTESEFWAARKKLLKRDSSKKSKQLIGFKSSMVLDTKPMSDGR----------
+ + V + EQLS E+ELR + L+E+SELQ+LHKQFV S VLTE EFWA RKKLL +DS +KSKQ +G KS MV KP +DGR
Subjt: AQAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVISGVLTESEFWAARKKLLKRDSSKKSKQLIGFKSSMVLDTKPMSDGR----------
Query: -----IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEADLGDDYTHLPDH
IFA KPAV QAF+N+VP+KM+EKDFWTKYFRAEYL+STKN+ AAAEAAEDEELA+FLK DEILA ETR KIR VDPTLD+EAD GDDYTHL DH
Subjt: -----IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEADLGDDYTHLPDH
Query: GIFRDGGKEITESQNEHYKRTLSQDLNRQGAVVLEGRTIDTTRKIT
GI RDG ++ E QN+ +KR+L QDLNR AVVLEGR+ID + T
Subjt: GIFRDGGKEITESQNEHYKRTLSQDLNRQGAVVLEGRTIDTTRKIT
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| Q55FP1 General transcription factor IIH subunit 1 | 7.6e-19 | 27.02 | Show/hide |
Query: LSKSEMELRMRCLQEDSELQKLHKQFVISG-VLTESEFWAARKKLLKRDSSKKSKQLIGFKSSMVLDTKPMSD--------------GRIFALKPAVHQA
LS+ +++ R+ LQ + EL++L++Q V V++ES+FW +RK +LK DS++ KQ G S+++ D +P S+ +IF P+V +A
Subjt: LSKSEMELRMRCLQEDSELQKLHKQFVISG-VLTESEFWAARKKLLKRDSSKKSKQLIGFKSSMVLDTKPMSD--------------GRIFALKPAVHQA
Query: FLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEADLGDDYTHLPDHGIFRDGGKEITESQNE
+ +VP K+SE++FW KY +++Y + ++S A A +D+ + + D++ ++K+ ++P +DL + G D +G+ D ++ + +
Subjt: FLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEADLGDDYTHLPDHGIFRDGGKEITESQNE
Query: HYKRTLSQDLNRQGAVVLEGRTIDTTRKITTPEDMIQVFLHLSTKNTT
L + NR A+VL + + T I +D + +N+T
Subjt: HYKRTLSQDLNRQGAVVLEGRTIDTTRKITTPEDMIQVFLHLSTKNTT
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| Q9DBA9 General transcription factor IIH subunit 1 | 7.3e-14 | 27.52 | Show/hide |
Query: IKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALAKSGEAAQAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVISG
IK K + EG K L L G + F F N S K +A + ++ + F ++ + E+E + R LQED L +L+K V+S
Subjt: IKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALAKSGEAAQAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVISG
Query: VLTESEFWAARKKLLKRDSSKKS-KQLIGFKSSMVLDTKPMSDG--------------RIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNS
V++ EFWA R + DSS S KQ +G ++ + D +P +DG IF PAV + VP+ M+EK+FWT++F++ Y H + +
Subjt: VLTESEFWAARKKLLKRDSSKKS-KQLIGFKSSMVLDTKPMSDG--------------RIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNS
Query: IAAA---AEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEA------DLGDDYTHLP----DHGIFRDGGKEITESQNEHYKRTLSQDLNRQGA
+ AE A+ +E L +T + +P LDL + D G + +P I + I + N H L+ L +Q A
Subjt: IAAA---AEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEA------DLGDDYTHLP----DHGIFRDGGKEITESQNEHYKRTLSQDLNRQGA
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| Q9M322 General transcription and DNA repair factor IIH subunit TFB1-3 | 1.1e-105 | 60.12 | Show/hide |
Query: VHRSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSTSKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALAKSGEA
+ + KYK+ VKDPGT G LE++E +F P+DP S KL V+ IK K TKEGSNKPPWLNLT QG S+IFEF+N+ D+H CR+F+ ALAK E
Subjt: VHRSAKYKTSVKDPGTPGVLEMTERKFVFRPSDPTSTSKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALAKSGEA
Query: AQAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVISGVLTESEFWAARKKLLKRDSSKKSKQLIGFKSSMVLDTKPMSDGR----------
+ V P EQLS +E ELR + L+E+SELQKLHKQFV S VLTE EFW+ RKKLL +DS +KSKQ +G KS MV KP +DGR
Subjt: AQAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVISGVLTESEFWAARKKLLKRDSSKKSKQLIGFKSSMVLDTKPMSDGR----------
Query: -----IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEADLGDDYTHLPDH
IFA KPAV QAF+N+VP KM+EKDFWTKYFRAEYL+STKN+ AAAEAAEDEELA+FLK DEILA E R+K+R VDPTLD++AD GDDYTHL DH
Subjt: -----IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEADLGDDYTHLPDH
Query: GIFRDGGKEITESQNEHYKRTLSQDLNRQGAVVLEGRTIDTTRKIT
GI RDG +I E QN+ KR+L QDLNR AVVLEGR I+ + T
Subjt: GIFRDGGKEITESQNEHYKRTLSQDLNRQGAVVLEGRTIDTTRKIT
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