; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10018066 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10018066
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr03:30235202..30248045
RNA-Seq ExpressionHG10018066
SyntenyHG10018066
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647791.1 hypothetical protein Csa_004224 [Cucumis sativus]9.0e-5990.3Show/hide
Query:  GDSENKQQGKGYNNLTGKSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGPMWLHFLIGAPPVIVFSSACA
        G S NKQQGKGYNNLT  SNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGPMWLHFLIGAPPVI+FSSACA
Subjt:  GDSENKQQGKGYNNLTGKSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGPMWLHFLIGAPPVIVFSSACA

Query:  GMTGGAVPALAQLVASSYHSAVSPLLTLSSKNDK
        GMTGGAVPALAQLVASSYHS     LT SS++DK
Subjt:  GMTGGAVPALAQLVASSYHSAVSPLLTLSSKNDK

KAG7027560.1 hypothetical protein SDJN02_11574 [Cucurbita argyrosperma subsp. argyrosperma]3.9e-5476.13Show/hide
Query:  LGDSENKQQGKGYNNLTGKSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGPMWLHFLIG-----------
        LGDSE++QQGKG +NL  KSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFN+VMPVVQRSVKGPMWLHFLIG           
Subjt:  LGDSENKQQGKGYNNLTGKSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGPMWLHFLIG-----------

Query:  ---------APPVIVFSSACAGMTGGAVPALAQLVASSYHSAVSPLLTLSSKNDK
                 APPVIVFSSACAGM GGAVPALAQL +SSYHSA+SP     SK+DK
Subjt:  ---------APPVIVFSSACAGMTGGAVPALAQLVASSYHSAVSPLLTLSSKNDK

XP_022925022.1 uncharacterized protein LOC111432392 [Cucurbita moschata]9.9e-5887.41Show/hide
Query:  LGDSENKQQGKGYNNLTGKSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGPMWLHFLIGAPPVIVFSSAC
        LGDSE++QQGKG +NL  KSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFN+VMPVVQRSVKGPMWLHFLIGAPPVIVFSSAC
Subjt:  LGDSENKQQGKGYNNLTGKSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGPMWLHFLIGAPPVIVFSSAC

Query:  AGMTGGAVPALAQLVASSYHSAVSPLLTLSSKNDK
        AGM GGAVPALAQL +SSYHSA+SP     SK+DK
Subjt:  AGMTGGAVPALAQLVASSYHSAVSPLLTLSSKNDK

XP_022966472.1 uncharacterized protein LOC111466117 [Cucurbita maxima]9.9e-5887.41Show/hide
Query:  LGDSENKQQGKGYNNLTGKSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGPMWLHFLIGAPPVIVFSSAC
        LGDSE+KQQGKG +NL  KSN+RCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFN+VMPVVQRSVKGPMWLHFLIGAPPVIVFSSAC
Subjt:  LGDSENKQQGKGYNNLTGKSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGPMWLHFLIGAPPVIVFSSAC

Query:  AGMTGGAVPALAQLVASSYHSAVSPLLTLSSKNDK
        AGM GGAVPALAQL +SSYHSA+SP     SK+DK
Subjt:  AGMTGGAVPALAQLVASSYHSAVSPLLTLSSKNDK

XP_038882424.1 uncharacterized protein LOC120073695 [Benincasa hispida]2.1e-5589.92Show/hide
Query:  KQQGKGYNNLTGKSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGPMWLHFLIGAPPVIVFSSACAGMTGG
        K   KGYNNL  KSNMRCQHCAGPLSKDMETSAWT PPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGPMWLHFLIGAPPVIVFSSACAGMTGG
Subjt:  KQQGKGYNNLTGKSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGPMWLHFLIGAPPVIVFSSACAGMTGG

Query:  AVPALAQLVASSYHSAVSPLLTLSSKNDK
        AVPALAQLVASSYHS     LT SSKN K
Subjt:  AVPALAQLVASSYHSAVSPLLTLSSKNDK

TrEMBL top hitse value%identityAlignment
A0A0A0L0B0 Uncharacterized protein2.8e-5888.24Show/hide
Query:  LGDSENKQQGKGYNNLTGKSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGPMWLHFLIGAPPVIVFSSAC
        LG S NKQQGKGYNNLT  SNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMI SAVGG ASAFYGFNNVMPVVQRSVKGPMWLHFLIGAPPVI+FSSAC
Subjt:  LGDSENKQQGKGYNNLTGKSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGPMWLHFLIGAPPVIVFSSAC

Query:  AGMTGGAVPALAQLVASSYHSAVSPLLTLSSKNDKA
        AGMTGGAVPALAQLV+SSYHS     LT SS++DKA
Subjt:  AGMTGGAVPALAQLVASSYHSAVSPLLTLSSKNDKA

A0A1S4E0V5 uncharacterized protein LOC1034959688.8e-5292.31Show/hide
Query:  SNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGPMWLHFLIGAPPVIVFSSACAGMTGGAVPALAQLVASSY
        SNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFN VMPVVQRSVKGPMWLHFLIGAPPVIVFSSACAGMTGGAVPALAQLVASSY
Subjt:  SNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGPMWLHFLIGAPPVIVFSSACAGMTGGAVPALAQLVASSY

Query:  HSAVSPLLTLSSKNDKA
        HS     LT SSK+DK+
Subjt:  HSAVSPLLTLSSKNDKA

A0A6J1D7Q1 uncharacterized protein LOC111018136 isoform X12.3e-5286.89Show/hide
Query:  GDSENKQQGKGYNNLTGKSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGPMWLHFLIGAPPVIVFSSACA
        GDSE+K Q KG  NL   SNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFN+VMP+V+RSVKGPMWLHFLIGAPPVIVFSSACA
Subjt:  GDSENKQQGKGYNNLTGKSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGPMWLHFLIGAPPVIVFSSACA

Query:  GMTGGAVPALAQLVASSYHSAV
        GM GG VPALAQL ++SYHSAV
Subjt:  GMTGGAVPALAQLVASSYHSAV

A0A6J1EAN3 uncharacterized protein LOC1114323924.8e-5887.41Show/hide
Query:  LGDSENKQQGKGYNNLTGKSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGPMWLHFLIGAPPVIVFSSAC
        LGDSE++QQGKG +NL  KSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFN+VMPVVQRSVKGPMWLHFLIGAPPVIVFSSAC
Subjt:  LGDSENKQQGKGYNNLTGKSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGPMWLHFLIGAPPVIVFSSAC

Query:  AGMTGGAVPALAQLVASSYHSAVSPLLTLSSKNDK
        AGM GGAVPALAQL +SSYHSA+SP     SK+DK
Subjt:  AGMTGGAVPALAQLVASSYHSAVSPLLTLSSKNDK

A0A6J1HN28 uncharacterized protein LOC1114661174.8e-5887.41Show/hide
Query:  LGDSENKQQGKGYNNLTGKSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGPMWLHFLIGAPPVIVFSSAC
        LGDSE+KQQGKG +NL  KSN+RCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFN+VMPVVQRSVKGPMWLHFLIGAPPVIVFSSAC
Subjt:  LGDSENKQQGKGYNNLTGKSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGPMWLHFLIGAPPVIVFSSAC

Query:  AGMTGGAVPALAQLVASSYHSAVSPLLTLSSKNDK
        AGM GGAVPALAQL +SSYHSA+SP     SK+DK
Subjt:  AGMTGGAVPALAQLVASSYHSAVSPLLTLSSKNDK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G41945.1 unknown protein5.0e-1536.45Show/hide
Query:  GKSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGPMWLHFLIGAPPVIVFSSACAGMTGGAVPALAQLVAS
        G  + RC  C   L+ + E   WTI P++ D+ ++ GS +GG  SA + FN  +P +Q    G   L FL+G P ++V+S   A   G A+P  AQL  +
Subjt:  GKSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGPMWLHFLIGAPPVIVFSSACAGMTGGAVPALAQLVAS

Query:  SYHSAVS
        SY+++ S
Subjt:  SYHSAVS

AT2G41945.2 unknown protein5.0e-1536.45Show/hide
Query:  GKSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGPMWLHFLIGAPPVIVFSSACAGMTGGAVPALAQLVAS
        G  + RC  C   L+ + E   WTI P++ D+ ++ GS +GG  SA + FN  +P +Q    G   L FL+G P ++V+S   A   G A+P  AQL  +
Subjt:  GKSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGPMWLHFLIGAPPVIVFSSACAGMTGGAVPALAQLVAS

Query:  SYHSAVS
        SY+++ S
Subjt:  SYHSAVS

AT2G41945.3 unknown protein7.4e-1135.71Show/hide
Query:  GKSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGPMWLHFLIGAPPVIVFSSACA
        G  + RC  C   L+ + E   WTI P++ D+ ++ GS +GG  SA + FN  +P +Q    G   L FL+G P ++V+S   A
Subjt:  GKSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGPMWLHFLIGAPPVIVFSSACA

AT3G04040.1 unknown protein2.1e-4276.24Show/hide
Query:  RCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGPMWLHFLIGAPPVIVFSSACAGMTGGAVPALAQLVASSYHSA
        RC HCAGPL+K++ET+ WT+ P IRDSFSMIGSAVGGTASAF GF++VMP+V++ +KGPMWLHFL+GAPPVIV SSACAG+ GGAVPALAQL +SSYH+A
Subjt:  RCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGPMWLHFLIGAPPVIVFSSACAGMTGGAVPALAQLVASSYHSA

Query:  V
        V
Subjt:  V

AT5G18250.1 unknown protein2.4e-4173.53Show/hide
Query:  MRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGPMWLHFLIGAPPVIVFSSACAGMTGGAVPALAQLVASSYHS
        +RC HCAGPL++++ETS WT+ P IRDSFSMIGSAVGGTASAF GFN+ MP+V++ +KGPMWLHFL+GAPPVIV SSACAG+ GG VPALAQL +SSY +
Subjt:  MRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGPMWLHFLIGAPPVIVFSSACAGMTGGAVPALAQLVASSYHS

Query:  AV
        AV
Subjt:  AV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCTGGGGATCAACGCATCTCAAAAGAGTAAAGGTTGGGGATGTGGAAAAGTTGGGGGATAGTGAGAACAAGCAACAAGGAAAGGGCTATAACAACCTTACTGGAAA
GAGTAATATGAGATGTCAACACTGTGCGGGTCCTCTTTCAAAGGATATGGAAACAAGTGCTTGGACAATTCCTCCTCTTATTAGGGATAGTTTCTCTATGATTGGCTCTG
CTGTTGGTGGTACTGCTAGTGCTTTCTATGGATTTAACAATGTGATGCCTGTTGTTCAGAGATCAGTGAAAGGGCCAATGTGGTTGCATTTTCTTATTGGTGCTCCTCCT
GTGATCGTATTTTCTTCAGCCTGTGCAGGAATGACAGGTGGTGCTGTTCCAGCTTTGGCCCAACTCGTTGCCTCATCTTATCATTCGGCTGTGTCTCCTTTGTTAACATT
GTCTTCAAAAAATGATAAGGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTCTGGGGATCAACGCATCTCAAAAGAGTAAAGGTTGGGGATGTGGAAAAGTTGGGGGATAGTGAGAACAAGCAACAAGGAAAGGGCTATAACAACCTTACTGGAAA
GAGTAATATGAGATGTCAACACTGTGCGGGTCCTCTTTCAAAGGATATGGAAACAAGTGCTTGGACAATTCCTCCTCTTATTAGGGATAGTTTCTCTATGATTGGCTCTG
CTGTTGGTGGTACTGCTAGTGCTTTCTATGGATTTAACAATGTGATGCCTGTTGTTCAGAGATCAGTGAAAGGGCCAATGTGGTTGCATTTTCTTATTGGTGCTCCTCCT
GTGATCGTATTTTCTTCAGCCTGTGCAGGAATGACAGGTGGTGCTGTTCCAGCTTTGGCCCAACTCGTTGCCTCATCTTATCATTCGGCTGTGTCTCCTTTGTTAACATT
GTCTTCAAAAAATGATAAGGCTTAG
Protein sequenceShow/hide protein sequence
MVWGSTHLKRVKVGDVEKLGDSENKQQGKGYNNLTGKSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGPMWLHFLIGAPP
VIVFSSACAGMTGGAVPALAQLVASSYHSAVSPLLTLSSKNDKA