; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10018070 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10018070
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionaminoacyl tRNA synthase complex-interacting multifunctional protein 1
Genome locationChr03:30302033..30302909
RNA-Seq ExpressionHG10018070
SyntenyHG10018070
Gene Ontology termsGO:0000049 - tRNA binding (molecular function)
InterPro domainsIPR002547 - tRNA-binding domain
IPR012340 - Nucleic acid-binding, OB-fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0062469.1 aminoacyl tRNA synthase complex-interacting multifunctional protein 1 isoform X2 [Cucumis melo var. makuwa]3.2e-6181.82Show/hide
Query:  MASLPTAAAIANVTKTASNRR-FFFFSSSLAHNFHHYRPFFV-----SRFTPPLRKDNVATRGRISRNGARFPFSFCTTASTEPVTMDTAIASSSTSLDK
        MASLPTAAAIANV KTA+N R FFFFSSSL+HNF H  PFF      SRFTP LRKDNVA  GRISRNG RFPFSFCTTASTEPVT D +IASSSTS+DK
Subjt:  MASLPTAAAIANVTKTASNRR-FFFFSSSLAHNFHHYRPFFV-----SRFTPPLRKDNVATRGRISRNGARFPFSFCTTASTEPVTMDTAIASSSTSLDK

Query:  -DDDPEKKIRDAADTLDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQLLE
         DDDPEK I++AAD LDIRVGRIIKAWRH EAD+LYVEEVDVGEPEPRLICSGLVKYIPLDQLL+
Subjt:  -DDDPEKKIRDAADTLDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQLLE

KAG6595713.1 Aminoacyl tRNA synthase complex-interacting multifunctional protein 1, partial [Cucurbita argyrosperma subsp. sororia]3.2e-6177.84Show/hide
Query:  MASLPTAAAIANVTKTASNRRFFF----FSSSLAHNFHHYRPFFVSR-----FTPPLRKDNVA----TRGRISRNGARFPFSFCTTASTEPVTMDTAIAS
        MASLPTAAAIANVTKTA+NRRF F    FSSSL+H F H RPFF  R     FTPPL KD VA    TRGRISRNGARFPFSFCT +STEP T D  IAS
Subjt:  MASLPTAAAIANVTKTASNRRFFF----FSSSLAHNFHHYRPFFVSR-----FTPPLRKDNVA----TRGRISRNGARFPFSFCTTASTEPVTMDTAIAS

Query:  SSTSLDKD-----DDPEKKIRDAADTLDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQLLE
        SS+S DKD     DDPEKKI+DAAD LDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQLL+
Subjt:  SSTSLDKD-----DDPEKKIRDAADTLDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQLLE

KAG7027675.1 Aminoacyl tRNA synthase complex-interacting multifunctional protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]3.2e-6177.84Show/hide
Query:  MASLPTAAAIANVTKTASNRRFFF----FSSSLAHNFHHYRPFFVSR-----FTPPLRKDNVA----TRGRISRNGARFPFSFCTTASTEPVTMDTAIAS
        MASLPTAAAIANVTKTA+NRRF F    FSSSL+H F H RPFF  R     FTPPL KD VA    TRGRISRNGARFPFSFCT +STEP T D  IAS
Subjt:  MASLPTAAAIANVTKTASNRRFFF----FSSSLAHNFHHYRPFFVSR-----FTPPLRKDNVA----TRGRISRNGARFPFSFCTTASTEPVTMDTAIAS

Query:  SSTSLDKD-----DDPEKKIRDAADTLDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQLLE
        SS+S DKD     DDPEKKI+DAAD LDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQLL+
Subjt:  SSTSLDKD-----DDPEKKIRDAADTLDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQLLE

XP_008449535.1 PREDICTED: aminoacyl tRNA synthase complex-interacting multifunctional protein 1 isoform X1 [Cucumis melo]3.2e-6181.82Show/hide
Query:  MASLPTAAAIANVTKTASNRR-FFFFSSSLAHNFHHYRPFFV-----SRFTPPLRKDNVATRGRISRNGARFPFSFCTTASTEPVTMDTAIASSSTSLDK
        MASLPTAAAIANV KTA+N R FFFFSSSL+HNF H  PFF      SRFTP LRKDNVA  GRISRNG RFPFSFCTTASTEPVT D +IASSSTS+DK
Subjt:  MASLPTAAAIANVTKTASNRR-FFFFSSSLAHNFHHYRPFFV-----SRFTPPLRKDNVATRGRISRNGARFPFSFCTTASTEPVTMDTAIASSSTSLDK

Query:  -DDDPEKKIRDAADTLDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQLLE
         DDDPEK I++AAD LDIRVGRIIKAWRH EAD+LYVEEVDVGEPEPRLICSGLVKYIPLDQLL+
Subjt:  -DDDPEKKIRDAADTLDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQLLE

XP_016900725.1 PREDICTED: aminoacyl tRNA synthase complex-interacting multifunctional protein 1 isoform X2 [Cucumis melo]3.2e-6181.82Show/hide
Query:  MASLPTAAAIANVTKTASNRR-FFFFSSSLAHNFHHYRPFFV-----SRFTPPLRKDNVATRGRISRNGARFPFSFCTTASTEPVTMDTAIASSSTSLDK
        MASLPTAAAIANV KTA+N R FFFFSSSL+HNF H  PFF      SRFTP LRKDNVA  GRISRNG RFPFSFCTTASTEPVT D +IASSSTS+DK
Subjt:  MASLPTAAAIANVTKTASNRR-FFFFSSSLAHNFHHYRPFFV-----SRFTPPLRKDNVATRGRISRNGARFPFSFCTTASTEPVTMDTAIASSSTSLDK

Query:  -DDDPEKKIRDAADTLDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQLLE
         DDDPEK I++AAD LDIRVGRIIKAWRH EAD+LYVEEVDVGEPEPRLICSGLVKYIPLDQLL+
Subjt:  -DDDPEKKIRDAADTLDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQLLE

TrEMBL top hitse value%identityAlignment
A0A0A0L299 tRNA-binding domain-containing protein3.4e-6181.21Show/hide
Query:  MASLPTAAAIANVTKTASNRR-FFFFSSSLAHNFHHYRPFFV-----SRFTPPLRKDNVATRGRISRNGARFPFSFCTTASTEPVTMDTAIASSSTSLDK
        MASLPTAA IANV KTA+N R FFFFSSSL+HNF HY P F      SRFTPPLR DNVA  GRISRNG +FPFSFCTTASTEPVT D +IA SSTSLDK
Subjt:  MASLPTAAAIANVTKTASNRR-FFFFSSSLAHNFHHYRPFFV-----SRFTPPLRKDNVATRGRISRNGARFPFSFCTTASTEPVTMDTAIASSSTSLDK

Query:  -DDDPEKKIRDAADTLDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQLLE
         DDDPEK I+DAAD LDIRVGRIIKAWRH EAD+LYVEEVDVGEPEPRLICSGLVKYIPLDQLL+
Subjt:  -DDDPEKKIRDAADTLDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQLLE

A0A1S3BN57 aminoacyl tRNA synthase complex-interacting multifunctional protein 1 isoform X11.5e-6181.82Show/hide
Query:  MASLPTAAAIANVTKTASNRR-FFFFSSSLAHNFHHYRPFFV-----SRFTPPLRKDNVATRGRISRNGARFPFSFCTTASTEPVTMDTAIASSSTSLDK
        MASLPTAAAIANV KTA+N R FFFFSSSL+HNF H  PFF      SRFTP LRKDNVA  GRISRNG RFPFSFCTTASTEPVT D +IASSSTS+DK
Subjt:  MASLPTAAAIANVTKTASNRR-FFFFSSSLAHNFHHYRPFFV-----SRFTPPLRKDNVATRGRISRNGARFPFSFCTTASTEPVTMDTAIASSSTSLDK

Query:  -DDDPEKKIRDAADTLDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQLLE
         DDDPEK I++AAD LDIRVGRIIKAWRH EAD+LYVEEVDVGEPEPRLICSGLVKYIPLDQLL+
Subjt:  -DDDPEKKIRDAADTLDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQLLE

A0A1S4DYD2 aminoacyl tRNA synthase complex-interacting multifunctional protein 1 isoform X21.5e-6181.82Show/hide
Query:  MASLPTAAAIANVTKTASNRR-FFFFSSSLAHNFHHYRPFFV-----SRFTPPLRKDNVATRGRISRNGARFPFSFCTTASTEPVTMDTAIASSSTSLDK
        MASLPTAAAIANV KTA+N R FFFFSSSL+HNF H  PFF      SRFTP LRKDNVA  GRISRNG RFPFSFCTTASTEPVT D +IASSSTS+DK
Subjt:  MASLPTAAAIANVTKTASNRR-FFFFSSSLAHNFHHYRPFFV-----SRFTPPLRKDNVATRGRISRNGARFPFSFCTTASTEPVTMDTAIASSSTSLDK

Query:  -DDDPEKKIRDAADTLDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQLLE
         DDDPEK I++AAD LDIRVGRIIKAWRH EAD+LYVEEVDVGEPEPRLICSGLVKYIPLDQLL+
Subjt:  -DDDPEKKIRDAADTLDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQLLE

A0A5A7V9V7 Aminoacyl tRNA synthase complex-interacting multifunctional protein 1 isoform X21.5e-6181.82Show/hide
Query:  MASLPTAAAIANVTKTASNRR-FFFFSSSLAHNFHHYRPFFV-----SRFTPPLRKDNVATRGRISRNGARFPFSFCTTASTEPVTMDTAIASSSTSLDK
        MASLPTAAAIANV KTA+N R FFFFSSSL+HNF H  PFF      SRFTP LRKDNVA  GRISRNG RFPFSFCTTASTEPVT D +IASSSTS+DK
Subjt:  MASLPTAAAIANVTKTASNRR-FFFFSSSLAHNFHHYRPFFV-----SRFTPPLRKDNVATRGRISRNGARFPFSFCTTASTEPVTMDTAIASSSTSLDK

Query:  -DDDPEKKIRDAADTLDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQLLE
         DDDPEK I++AAD LDIRVGRIIKAWRH EAD+LYVEEVDVGEPEPRLICSGLVKYIPLDQLL+
Subjt:  -DDDPEKKIRDAADTLDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQLLE

A0A6J1EB98 aminoacyl tRNA synthase complex-interacting multifunctional protein 12.9e-6076.7Show/hide
Query:  MASLPTAAAIANVTKTASNRRFFF----FSSSLAHNFHHYRPFFVSR-----FTPPLRKDNVA----TRGRISRNGARFPFSFCTTASTEPVTMDTAIAS
        MASLPTAAAIANVTKTA+NRR  F    FSSSL+H F H RPFF  R     FTPPL KD VA    TRGRISRNGARFPFSFCT +STEP T D  IAS
Subjt:  MASLPTAAAIANVTKTASNRRFFF----FSSSLAHNFHHYRPFFVSR-----FTPPLRKDNVA----TRGRISRNGARFPFSFCTTASTEPVTMDTAIAS

Query:  SSTSLDKD-----DDPEKKIRDAADTLDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQLLE
        SS+S DKD     DDPEKKI+DAAD LDIRVGRIIKAWRH EADSLYVEEVDVGEPEPRLICSGLVKYIPLDQLL+
Subjt:  SSTSLDKD-----DDPEKKIRDAADTLDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQLLE

SwissProt top hitse value%identityAlignment
O54873 Aminoacyl tRNA synthase complex-interacting multifunctional protein 16.3e-1249.32Show/hide
Query:  KDDDPEKKIRDAADT----------LDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQL
        K +  EKK++ AA +          LD+R+GRI+   +H +ADSLYVEEVDVGE  PR + SGLV ++PLDQ+
Subjt:  KDDDPEKKIRDAADT----------LDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQL

Q20970 Methionine--tRNA ligase, cytoplasmic1.4e-1162.5Show/hide
Query:  LDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQL
        LD+RVGRIIK  +H +AD+LYVE++DVGE  PR + SGLV+++PLDQ+
Subjt:  LDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQL

Q5ZJ08 Tyrosine--tRNA ligase, cytoplasmic1.4e-1150.79Show/hide
Query:  KDDDPEKKIRDAADTLDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQL
        K+ +PE  +      LDIRVG+++   +H +ADSLYVE++DVGEPEPR + SGLV+++P +QL
Subjt:  KDDDPEKKIRDAADTLDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQL

Q7ZX51 Tyrosine--tRNA ligase, cytoplasmic3.1e-1163.27Show/hide
Query:  LDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQLL
        LD+RVG+I+   +H +ADSLYVE VDVGE  PR + SGLV+Y+P DQLL
Subjt:  LDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQLL

Q9ZTS1 Probable methionine--tRNA ligase2.4e-1166.67Show/hide
Query:  LDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQL
        LDIRVG I KA +H +ADSLYVEE+DVGE  PR + SGLVK+IPL+++
Subjt:  LDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQL

Arabidopsis top hitse value%identityAlignment
AT2G40660.1 Nucleic acid-binding, OB-fold-like protein3.3e-0846.03Show/hide
Query:  DDDPEKKIRD-AADTLDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQL
        + +P KK  + +   L+I+VG I KAW+H  ADSL VEE+DVGE + R + SGL K+   + L
Subjt:  DDDPEKKIRD-AADTLDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQL

AT3G59980.1 Nucleic acid-binding, OB-fold-like protein1.2e-2153.06Show/hide
Query:  RNGARFP--FSFCTTASTEPVTMDTAIASSSTSLDKDDDPEKKIRDAADTLDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQL
        RN + +P   +FCT A   P    T  A  S    +    E+ +++ A+ LDI+VGRI+KAW+H+EADSLYVEEVD+GE EPR+ICSGLVKY+PLD L
Subjt:  RNGARFP--FSFCTTASTEPVTMDTAIASSSTSLDKDDDPEKKIRDAADTLDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQL

AT4G13780.1 methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putative3.8e-1264.58Show/hide
Query:  LDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQL
        LDIRVG+I+KA +H +AD+LYVEE+DVG  E R + SGLVKYIPL+++
Subjt:  LDIRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTCTCCCTACGGCTGCTGCAATTGCCAATGTTACAAAAACTGCCAGCAATCGCCGCTTCTTCTTCTTCTCTTCTTCCCTTGCCCATAACTTCCATCATTATCG
CCCGTTCTTCGTTTCTCGTTTTACCCCACCACTTCGTAAGGATAATGTCGCCACCAGAGGAAGAATATCCAGAAATGGTGCGCGGTTTCCCTTCTCATTTTGCACTACCG
CATCCACTGAGCCTGTCACCATGGACACCGCCATTGCATCGTCTTCCACATCATTGGATAAGGACGATGATCCGGAAAAGAAGATTAGGGATGCGGCCGACACCCTCGAT
ATTAGGGTTGGGCGAATCATTAAGGCTTGGAGACATCAGGAGGCTGACTCTCTTTATGTAGAAGAGGTTGATGTTGGTGAACCCGAGCCGAGGCTTATTTGCAGTGGCCT
TGTTAAATATATCCCTCTTGATCAACTTCTGGAGGAAACAACGGACACTATGAAATGGAATCCGAAGGAACCAATTTCTTCTTATAGCAAACATCAGATATCAGTTTTAG
CGAGTAGAAAAGGTAGAGGAAAAATGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCTCTCCCTACGGCTGCTGCAATTGCCAATGTTACAAAAACTGCCAGCAATCGCCGCTTCTTCTTCTTCTCTTCTTCCCTTGCCCATAACTTCCATCATTATCG
CCCGTTCTTCGTTTCTCGTTTTACCCCACCACTTCGTAAGGATAATGTCGCCACCAGAGGAAGAATATCCAGAAATGGTGCGCGGTTTCCCTTCTCATTTTGCACTACCG
CATCCACTGAGCCTGTCACCATGGACACCGCCATTGCATCGTCTTCCACATCATTGGATAAGGACGATGATCCGGAAAAGAAGATTAGGGATGCGGCCGACACCCTCGAT
ATTAGGGTTGGGCGAATCATTAAGGCTTGGAGACATCAGGAGGCTGACTCTCTTTATGTAGAAGAGGTTGATGTTGGTGAACCCGAGCCGAGGCTTATTTGCAGTGGCCT
TGTTAAATATATCCCTCTTGATCAACTTCTGGAGGAAACAACGGACACTATGAAATGGAATCCGAAGGAACCAATTTCTTCTTATAGCAAACATCAGATATCAGTTTTAG
CGAGTAGAAAAGGTAGAGGAAAAATGTAG
Protein sequenceShow/hide protein sequence
MASLPTAAAIANVTKTASNRRFFFFSSSLAHNFHHYRPFFVSRFTPPLRKDNVATRGRISRNGARFPFSFCTTASTEPVTMDTAIASSSTSLDKDDDPEKKIRDAADTLD
IRVGRIIKAWRHQEADSLYVEEVDVGEPEPRLICSGLVKYIPLDQLLEETTDTMKWNPKEPISSYSKHQISVLASRKGRGKM