; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10018071 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10018071
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptiontRNA-binding domain-containing protein
Genome locationChr03:30322084..30325244
RNA-Seq ExpressionHG10018071
SyntenyHG10018071
Gene Ontology termsGO:0000049 - tRNA binding (molecular function)
InterPro domainsIPR012340 - Nucleic acid-binding, OB-fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004144343.1 aminoacyl tRNA synthase complex-interacting multifunctional protein 1 isoform X1 [Cucumis sativus]2.9e-4495.74Show/hide
Query:  MLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAATPNQIQKKKIWEMVQPHLKTDACCTAMLGSHPMRTSTGVVTSTSLKHANIS
        MLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAA PNQIQKKKIWEMVQPHLKTD CCTA+LGSHPMRTS GVVTSTSLKHANIS
Subjt:  MLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAATPNQIQKKKIWEMVQPHLKTDACCTAMLGSHPMRTSTGVVTSTSLKHANIS

XP_008449535.1 PREDICTED: aminoacyl tRNA synthase complex-interacting multifunctional protein 1 isoform X1 [Cucumis melo]1.3e-4495.74Show/hide
Query:  MLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAATPNQIQKKKIWEMVQPHLKTDACCTAMLGSHPMRTSTGVVTSTSLKHANIS
        MLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAA+PNQIQKKKIWEMVQPHLKTD CCTA+LGSHP+RTSTGVVTSTSLKHANIS
Subjt:  MLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAATPNQIQKKKIWEMVQPHLKTDACCTAMLGSHPMRTSTGVVTSTSLKHANIS

XP_022966410.1 aminoacyl tRNA synthase complex-interacting multifunctional protein 1 [Cucurbita maxima]6.3e-3987.23Show/hide
Query:  MLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAATPNQIQKKKIWEMVQPHLKTDACCTAMLGSHPMRTSTGVVTSTSLKHANIS
        MLMAASDS+HENVELLLPPE SIPGERIWFGSED+K  QPDAAT NQIQKKKIWEMVQPHLKTDA CTA+LG HPMRTS G+VT+TSLKHANIS
Subjt:  MLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAATPNQIQKKKIWEMVQPHLKTDACCTAMLGSHPMRTSTGVVTSTSLKHANIS

XP_023518841.1 aminoacyl tRNA synthase complex-interacting multifunctional protein 1 [Cucurbita pepo subsp. pepo]3.7e-3988.3Show/hide
Query:  MLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAATPNQIQKKKIWEMVQPHLKTDACCTAMLGSHPMRTSTGVVTSTSLKHANIS
        MLMAASDSLHENVELLLPPE SIPGERIWFGSED+K  QPDAAT NQIQKKKIWEMVQPHLKTDA CTA+LG HPMRTS G+VT+TSLKHANIS
Subjt:  MLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAATPNQIQKKKIWEMVQPHLKTDACCTAMLGSHPMRTSTGVVTSTSLKHANIS

XP_038882664.1 aminoacyl tRNA synthase complex-interacting multifunctional protein 1 [Benincasa hispida]4.2e-4393.62Show/hide
Query:  MLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAATPNQIQKKKIWEMVQPHLKTDACCTAMLGSHPMRTSTGVVTSTSLKHANIS
        MLMAASDSLHEN+ELLLP EGS PGERIWFGSEDEKGNQPDAATPNQIQKKKIWEMVQPHLKTD CCTA+LGSHPMRTSTGVVTS SLKHANIS
Subjt:  MLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAATPNQIQKKKIWEMVQPHLKTDACCTAMLGSHPMRTSTGVVTSTSLKHANIS

TrEMBL top hitse value%identityAlignment
A0A0A0L299 tRNA-binding domain-containing protein1.4e-4495.74Show/hide
Query:  MLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAATPNQIQKKKIWEMVQPHLKTDACCTAMLGSHPMRTSTGVVTSTSLKHANIS
        MLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAA PNQIQKKKIWEMVQPHLKTD CCTA+LGSHPMRTS GVVTSTSLKHANIS
Subjt:  MLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAATPNQIQKKKIWEMVQPHLKTDACCTAMLGSHPMRTSTGVVTSTSLKHANIS

A0A1S3BN57 aminoacyl tRNA synthase complex-interacting multifunctional protein 1 isoform X16.4e-4595.74Show/hide
Query:  MLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAATPNQIQKKKIWEMVQPHLKTDACCTAMLGSHPMRTSTGVVTSTSLKHANIS
        MLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAA+PNQIQKKKIWEMVQPHLKTD CCTA+LGSHP+RTSTGVVTSTSLKHANIS
Subjt:  MLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAATPNQIQKKKIWEMVQPHLKTDACCTAMLGSHPMRTSTGVVTSTSLKHANIS

A0A2I4G624 aminoacyl tRNA synthase complex-interacting multifunctional protein 11.7e-3785.11Show/hide
Query:  MLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAATPNQIQKKKIWEMVQPHLKTDACCTAMLGSHPMRTSTGVVTSTSLKHANIS
        MLMAASD+ HENVELL+PPEGS+PGERIWFGSE+EK NQP AATPNQIQKKKIWE+VQPHLKTDA CTAMLG H MRTS GVV STSLK+ANIS
Subjt:  MLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAATPNQIQKKKIWEMVQPHLKTDACCTAMLGSHPMRTSTGVVTSTSLKHANIS

A0A6J1EB98 aminoacyl tRNA synthase complex-interacting multifunctional protein 19.8e-3886.17Show/hide
Query:  MLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAATPNQIQKKKIWEMVQPHLKTDACCTAMLGSHPMRTSTGVVTSTSLKHANIS
        MLMAASDSLHENVELLLPPE SIPGERIWFGS+D+K  QPDAAT NQIQKKKIWEMVQPHLKTDA  TA+LG HPMRTS G+VT+TSLKHANIS
Subjt:  MLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAATPNQIQKKKIWEMVQPHLKTDACCTAMLGSHPMRTSTGVVTSTSLKHANIS

A0A6J1HP94 aminoacyl tRNA synthase complex-interacting multifunctional protein 13.1e-3987.23Show/hide
Query:  MLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAATPNQIQKKKIWEMVQPHLKTDACCTAMLGSHPMRTSTGVVTSTSLKHANIS
        MLMAASDS+HENVELLLPPE SIPGERIWFGSED+K  QPDAAT NQIQKKKIWEMVQPHLKTDA CTA+LG HPMRTS G+VT+TSLKHANIS
Subjt:  MLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAATPNQIQKKKIWEMVQPHLKTDACCTAMLGSHPMRTSTGVVTSTSLKHANIS

SwissProt top hitse value%identityAlignment
O54873 Aminoacyl tRNA synthase complex-interacting multifunctional protein 12.3e-0739.36Show/hide
Query:  MLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAATPNQIQKKKIWEMVQPHLKTDACCTAMLGSHPMRT-STGVVTSTSLKHANI
        M+M AS    E VE+L PP GS+PG+RI F   D    +PD        KKKIWE +QP L T+A C A     P      GV  + ++ ++ I
Subjt:  MLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAATPNQIQKKKIWEMVQPHLKTDACCTAMLGSHPMRT-STGVVTSTSLKHANI

P31230 Aminoacyl tRNA synthase complex-interacting multifunctional protein 13.0e-0739.36Show/hide
Query:  MLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAATPNQIQKKKIWEMVQPHLKTDACCTAMLGSHPMRT-STGVVTSTSLKHANI
        M+M AS    E VE+L PP GS+PG+RI F   D    +PD        KKKIWE +QP L T+A C A     P      GV  + ++ ++ I
Subjt:  MLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAATPNQIQKKKIWEMVQPHLKTDACCTAMLGSHPMRT-STGVVTSTSLKHANI

Q12904 Aminoacyl tRNA synthase complex-interacting multifunctional protein 11.9e-0637.23Show/hide
Query:  MLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAATPNQIQKKKIWEMVQPHLKTDACCTAMLGSHPMRT-STGVVTSTSLKHANI
        M+M AS    E +E+L PP GS+PG+RI F   D    +PD        KKKIWE +QP L T+  C A     P      GV  + ++ ++ I
Subjt:  MLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAATPNQIQKKKIWEMVQPHLKTDACCTAMLGSHPMRT-STGVVTSTSLKHANI

Q4KM49 Tyrosine--tRNA ligase, cytoplasmic1.2e-0537.23Show/hide
Query:  MLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAATPNQIQKKKIWEMVQPHLKTDACCTAMLGSHPMRTSTGVVTSTSLKHANIS
        +L A+ + +   VE L PP GS PGER+ F    EKG   +   P    KKK++E +Q   K    C A        T  G V+  SLK  NIS
Subjt:  MLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAATPNQIQKKKIWEMVQPHLKTDACCTAMLGSHPMRTSTGVVTSTSLKHANIS

Q5R8T5 Tyrosine--tRNA ligase, cytoplasmic1.2e-0536.17Show/hide
Query:  MLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAATPNQIQKKKIWEMVQPHLKTDACCTAMLGSHPMRTSTGVVTSTSLKHANIS
        +L A+ + ++  VE L PP GS PGER+ F    EKG   +   P    KKK++E +Q   K    C A        T  G ++  SLK  NIS
Subjt:  MLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAATPNQIQKKKIWEMVQPHLKTDACCTAMLGSHPMRTSTGVVTSTSLKHANIS

Arabidopsis top hitse value%identityAlignment
AT2G40660.1 Nucleic acid-binding, OB-fold-like protein4.9e-0537.21Show/hide
Query:  MLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAATPNQIQKKKIWEMVQPHLKTDACCTAMLGSHPMRTSTGVVTST
        +++ AS   H  VE LLPP G+ PGER+ F   +  G   D   P    KKK  E + P L TD    A        TS G  TS+
Subjt:  MLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAATPNQIQKKKIWEMVQPHLKTDACCTAMLGSHPMRTSTGVVTST

AT3G59980.1 Nucleic acid-binding, OB-fold-like protein8.8e-3163.83Show/hide
Query:  MLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAATPNQIQKKKIWEMVQPHLKTDACCTAMLGSHPMRTSTGVVTSTSLKHANIS
        ML+AASD+ HENVELL+PPEGS+PG+R+WFG+E++    P+ A PN++QKKK+WE+VQP LKTDA   +ML  H MRTS+G+VTS SL++ANIS
Subjt:  MLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAATPNQIQKKKIWEMVQPHLKTDACCTAMLGSHPMRTSTGVVTSTSLKHANIS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTAATGGCTGCTTCTGATTCCTTGCACGAGAACGTTGAACTTCTTTTGCCCCCTGAAGGTTCGATTCCAGGTGAAAGAATATGGTTTGGATCCGAAGATGAAAAAGG
CAACCAACCTGATGCTGCTACCCCCAACCAGATTCAGAAGAAGAAAATATGGGAAATGGTTCAGCCTCATCTGAAGACAGATGCTTGTTGCACTGCTATGTTGGGTTCCC
ATCCAATGCGGACCTCCACTGGTGTTGTCACCTCCACCTCCCTTAAACACGCTAACATTTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTAATGGCTGCTTCTGATTCCTTGCACGAGAACGTTGAACTTCTTTTGCCCCCTGAAGGTTCGATTCCAGGTGAAAGAATATGGTTTGGATCCGAAGATGAAAAAGG
CAACCAACCTGATGCTGCTACCCCCAACCAGATTCAGAAGAAGAAAATATGGGAAATGGTTCAGCCTCATCTGAAGACAGATGCTTGTTGCACTGCTATGTTGGGTTCCC
ATCCAATGCGGACCTCCACTGGTGTTGTCACCTCCACCTCCCTTAAACACGCTAACATTTCTTGA
Protein sequenceShow/hide protein sequence
MLMAASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAATPNQIQKKKIWEMVQPHLKTDACCTAMLGSHPMRTSTGVVTSTSLKHANIS