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HG10018111 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10018111
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionCopper ion binding
Genome locationChr04:498348..504327
RNA-Seq ExpressionHG10018111
SyntenyHG10018111
Gene Ontology termsGO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573626.1 putative protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]9.9e-0986.05Show/hide
Query:  LTERRSIDMAAARTAARIFSRRFSSSGKILSEEEKAAENVYIK
        L+E RSI+MAAARTAA IFSRRFS SGKILSEEEKAAEN+YIK
Subjt:  LTERRSIDMAAARTAARIFSRRFSSSGKILSEEEKAAENVYIK
KAG7012707.1 putative protein, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]7.1e-0794.29Show/hide
Query:  MAAARTAARIFSRRFSSSGKILSEEEKAAENVYIK
        MAAARTAARIFSRRFS SGKILSEEEKAAEN+YIK
Subjt:  MAAARTAARIFSRRFSSSGKILSEEEKAAENVYIK
XP_008461298.1 PREDICTED: uncharacterized protein At2g27730, mitochondrial [Cucumis melo]1.9e-07100Show/hide
Query:  MAAARTAARIFSRRFSSSGKILSEEEKAAENVYIK
        MAAARTAARIFSRRFSSSGKILSEEEKAAENVYIK
Subjt:  MAAARTAARIFSRRFSSSGKILSEEEKAAENVYIK
XP_038893784.1 uncharacterized protein At2g27730, mitochondrial-like [Benincasa hispida]1.9e-07100Show/hide
Query:  MAAARTAARIFSRRFSSSGKILSEEEKAAENVYIK
        MAAARTAARIFSRRFSSSGKILSEEEKAAENVYIK
Subjt:  MAAARTAARIFSRRFSSSGKILSEEEKAAENVYIK
XP_038895664.1 uncharacterized protein At2g27730, mitochondrial-like [Benincasa hispida]1.9e-07100Show/hide
Query:  MAAARTAARIFSRRFSSSGKILSEEEKAAENVYIK
        MAAARTAARIFSRRFSSSGKILSEEEKAAENVYIK
Subjt:  MAAARTAARIFSRRFSSSGKILSEEEKAAENVYIK
TrEMBL top hitse value%identityAlignment
A0A0A0LT33 Uncharacterized protein3.4e-0794.29Show/hide
Query:  MAAARTAARIFSRRFSSSGKILSEEEKAAENVYIK
        MAAARTAARIFSRRFSS GKILSEEEKAAEN+YIK
Subjt:  MAAARTAARIFSRRFSSSGKILSEEEKAAENVYIK
A0A1S3CEE3 uncharacterized protein At2g27730, mitochondrial9.0e-08100Show/hide
Query:  MAAARTAARIFSRRFSSSGKILSEEEKAAENVYIK
        MAAARTAARIFSRRFSSSGKILSEEEKAAENVYIK
Subjt:  MAAARTAARIFSRRFSSSGKILSEEEKAAENVYIK
A0A5A7T219 Uncharacterized protein9.0e-08100Show/hide
Query:  MAAARTAARIFSRRFSSSGKILSEEEKAAENVYIK
        MAAARTAARIFSRRFSSSGKILSEEEKAAENVYIK
Subjt:  MAAARTAARIFSRRFSSSGKILSEEEKAAENVYIK
A0A6J1G0C8 uncharacterized protein At2g27730, mitochondrial3.4e-0794.29Show/hide
Query:  MAAARTAARIFSRRFSSSGKILSEEEKAAENVYIK
        MAAARTAARIFSRRFS SGKILSEEEKAAEN+YIK
Subjt:  MAAARTAARIFSRRFSSSGKILSEEEKAAENVYIK
A0A6J1HVU8 uncharacterized protein At2g27730, mitochondrial3.4e-0794.29Show/hide
Query:  MAAARTAARIFSRRFSSSGKILSEEEKAAENVYIK
        MAAARTAARIFSRRFS SGKILSEEEKAAEN+YIK
Subjt:  MAAARTAARIFSRRFSSSGKILSEEEKAAENVYIK
SwissProt top hitse value%identityAlignment
Q9ZUX4 Uncharacterized protein At2g27730, mitochondrial3.4e-0475.76Show/hide
Query:  AARTAARIFSRRFSSSGKILSEEEKAAENVYIK
        A R A RI SRRF SSGK+LSEEE+AAENV+IK
Subjt:  AARTAARIFSRRFSSSGKILSEEEKAAENVYIK
Arabidopsis top hitse value%identityAlignment
AT2G27730.1 copper ion binding2.4e-0575.76Show/hide
Query:  AARTAARIFSRRFSSSGKILSEEEKAAENVYIK
        A R A RI SRRF SSGK+LSEEE+AAENV+IK
Subjt:  AARTAARIFSRRFSSSGKILSEEEKAAENVYIK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAATGCCATTAGCTCCAACACATTCGAATGTTCCAACCCAAACATTTGTTCAGGATAATCAGGAATCCGAGGAACGGGAAATTCGAGGAGAAGCCCAGTTAACTGA
AAGACGATCAATCGATATGGCAGCAGCTAGGACGGCCGCTAGAATCTTTTCCCGAAGGTTCTCGAGCAGCGGGAAGATACTCAGCGAGGAAGAAAAGGCTGCTGAGAATG
TCTACATCAAGGTGCCCATCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCAATGCCATTAGCTCCAACACATTCGAATGTTCCAACCCAAACATTTGTTCAGGATAATCAGGAATCCGAGGAACGGGAAATTCGAGGAGAAGCCCAGTTAACTGA
AAGACGATCAATCGATATGGCAGCAGCTAGGACGGCCGCTAGAATCTTTTCCCGAAGGTTCTCGAGCAGCGGGAAGATACTCAGCGAGGAAGAAAAGGCTGCTGAGAATG
TCTACATCAAGGTGCCCATCTAA
Protein sequenceShow/hide protein sequence
MSMPLAPTHSNVPTQTFVQDNQESEEREIRGEAQLTERRSIDMAAARTAARIFSRRFSSSGKILSEEEKAAENVYIKVPI