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HG10018145 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10018145
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionRAB6-interacting golgin
Genome locationChr04:871136..873855
RNA-Seq ExpressionHG10018145
SyntenyHG10018145
Gene Ontology termsGO:0005794 - Golgi apparatus (cellular component)
InterPro domainsIPR007033 - RAB6-interacting golgin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139478.1 uncharacterized protein LOC101203874 [Cucumis sativus]1.0e-7494.38Show/hide
Query:  MTTQKQSWEAQQSQQMQRVKSSGMISSHVN--AIGSPLKEDQEEELSRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPM
        MTTQKQSWEA   QQMQRVK+SGMISS+VN   IGSPLKEDQEEE+SRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPM
Subjt:  MTTQKQSWEAQQSQQMQRVKSSGMISSHVN--AIGSPLKEDQEEELSRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPM

Query:  RKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVAKLMELVNESEKLRMKKLEELSKNIDIL
        RKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLV+KLMELVNESEKLRMKKLEELSKNIDIL
Subjt:  RKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVAKLMELVNESEKLRMKKLEELSKNIDIL

XP_008461743.1 PREDICTED: probable DNA double-strand break repair Rad50 ATPase [Cucumis melo]3.5e-7593.82Show/hide
Query:  MTTQKQSWEAQQSQQMQRVKSSGMISSHV-NAIGSPLKEDQEEELSRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMR
        MTTQKQSWEA   QQMQRVK+SGMISS+V N IGSPLKEDQEEE+SRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMR
Subjt:  MTTQKQSWEAQQSQQMQRVKSSGMISSHV-NAIGSPLKEDQEEELSRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMR

Query:  KEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVAKLMELVNESEKLRMKKLEELSKNIDILH
        KEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKN+EKSQLV+KLMELVNESEKLRM+KLEELSKNIDILH
Subjt:  KEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVAKLMELVNESEKLRMKKLEELSKNIDILH

XP_022142637.1 uncharacterized protein LOC111012700 [Momordica charantia]3.9e-7492.7Show/hide
Query:  MTTQKQSWEAQ-QSQQMQRVKSSGMISSHVNAIGSPLKEDQEEELSRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMR
        MTTQKQSWEAQ Q  QMQRV++SGMI SHVNAIGSPLKEDQ+EELSRSA ALFRAKEEEIERKKMEMR+KVEARLGRAEEATKRLAEIREELE M DPMR
Subjt:  MTTQKQSWEAQ-QSQQMQRVKSSGMISSHVNAIGSPLKEDQEEELSRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMR

Query:  KEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVAKLMELVNESEKLRMKKLEELSKNIDILH
        KEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVL+LFNEKN+EKSQLVAKLMELVNESEKLRMKKLEELSKNIDILH
Subjt:  KEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVAKLMELVNESEKLRMKKLEELSKNIDILH

XP_022970344.1 uncharacterized protein LOC111469338 [Cucurbita maxima]4.9e-6988.7Show/hide
Query:  MTTQKQSWEAQQSQQMQRVKSSGMISSHVNAIGSPLKEDQEEELSRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRK
        MTTQKQSWEAQQSQ  QRVK          AIGSP +EDQEEELSRSALALFRAKEEEIERKKMEMREKVE RLGRAEEATKRLAEIREELEGMTDPMRK
Subjt:  MTTQKQSWEAQQSQQMQRVKSSGMISSHVNAIGSPLKEDQEEELSRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRK

Query:  EVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVAKLMELVNESEKLRMKKLEELSKNIDILH
        EVS IRKKIDLVNKELKPLG+TCQKKEREYKEVL+L NEKNKEKSQLVAKLMELVNESEKLRMKKLEELS NIDILH
Subjt:  EVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVAKLMELVNESEKLRMKKLEELSKNIDILH

XP_038893849.1 uncharacterized protein LOC120082661 [Benincasa hispida]3.4e-7896.07Show/hide
Query:  MTTQKQSWEAQQSQQMQRVKSSG-MISSHVNAIGSPLKEDQEEELSRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMR
        MTT KQSWEAQQSQQMQRVK+SG MISS+VNAIGSP+KEDQEEE+SRSALA+FRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMR
Subjt:  MTTQKQSWEAQQSQQMQRVKSSG-MISSHVNAIGSPLKEDQEEELSRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMR

Query:  KEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVAKLMELVNESEKLRMKKLEELSKNIDILH
        KEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVAKLMELVNESEKLRMKKLEELSKNIDILH
Subjt:  KEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVAKLMELVNESEKLRMKKLEELSKNIDILH

TrEMBL top hitse value%identityAlignment
A0A0A0LY59 RAB6-interacting golgin5.0e-7594.38Show/hide
Query:  MTTQKQSWEAQQSQQMQRVKSSGMISSHVN--AIGSPLKEDQEEELSRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPM
        MTTQKQSWEA   QQMQRVK+SGMISS+VN   IGSPLKEDQEEE+SRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPM
Subjt:  MTTQKQSWEAQQSQQMQRVKSSGMISSHVN--AIGSPLKEDQEEELSRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPM

Query:  RKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVAKLMELVNESEKLRMKKLEELSKNIDIL
        RKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLV+KLMELVNESEKLRMKKLEELSKNIDIL
Subjt:  RKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVAKLMELVNESEKLRMKKLEELSKNIDIL

A0A1S3CFV6 RAB6-interacting golgin1.7e-7593.82Show/hide
Query:  MTTQKQSWEAQQSQQMQRVKSSGMISSHV-NAIGSPLKEDQEEELSRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMR
        MTTQKQSWEA   QQMQRVK+SGMISS+V N IGSPLKEDQEEE+SRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMR
Subjt:  MTTQKQSWEAQQSQQMQRVKSSGMISSHV-NAIGSPLKEDQEEELSRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMR

Query:  KEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVAKLMELVNESEKLRMKKLEELSKNIDILH
        KEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKN+EKSQLV+KLMELVNESEKLRM+KLEELSKNIDILH
Subjt:  KEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVAKLMELVNESEKLRMKKLEELSKNIDILH

A0A5D3CH78 RAB6-interacting golgin1.7e-7593.82Show/hide
Query:  MTTQKQSWEAQQSQQMQRVKSSGMISSHV-NAIGSPLKEDQEEELSRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMR
        MTTQKQSWEA   QQMQRVK+SGMISS+V N IGSPLKEDQEEE+SRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMR
Subjt:  MTTQKQSWEAQQSQQMQRVKSSGMISSHV-NAIGSPLKEDQEEELSRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMR

Query:  KEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVAKLMELVNESEKLRMKKLEELSKNIDILH
        KEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKN+EKSQLV+KLMELVNESEKLRM+KLEELSKNIDILH
Subjt:  KEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVAKLMELVNESEKLRMKKLEELSKNIDILH

A0A6J1CNF1 RAB6-interacting golgin1.9e-7492.7Show/hide
Query:  MTTQKQSWEAQ-QSQQMQRVKSSGMISSHVNAIGSPLKEDQEEELSRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMR
        MTTQKQSWEAQ Q  QMQRV++SGMI SHVNAIGSPLKEDQ+EELSRSA ALFRAKEEEIERKKMEMR+KVEARLGRAEEATKRLAEIREELE M DPMR
Subjt:  MTTQKQSWEAQ-QSQQMQRVKSSGMISSHVNAIGSPLKEDQEEELSRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMR

Query:  KEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVAKLMELVNESEKLRMKKLEELSKNIDILH
        KEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVL+LFNEKN+EKSQLVAKLMELVNESEKLRMKKLEELSKNIDILH
Subjt:  KEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVAKLMELVNESEKLRMKKLEELSKNIDILH

A0A6J1I589 RAB6-interacting golgin2.4e-6988.7Show/hide
Query:  MTTQKQSWEAQQSQQMQRVKSSGMISSHVNAIGSPLKEDQEEELSRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRK
        MTTQKQSWEAQQSQ  QRVK          AIGSP +EDQEEELSRSALALFRAKEEEIERKKMEMREKVE RLGRAEEATKRLAEIREELEGMTDPMRK
Subjt:  MTTQKQSWEAQQSQQMQRVKSSGMISSHVNAIGSPLKEDQEEELSRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRK

Query:  EVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVAKLMELVNESEKLRMKKLEELSKNIDILH
        EVS IRKKIDLVNKELKPLG+TCQKKEREYKEVL+L NEKNKEKSQLVAKLMELVNESEKLRMKKLEELS NIDILH
Subjt:  EVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVAKLMELVNESEKLRMKKLEELSKNIDILH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G27740.1 Family of unknown function (DUF662)6.5e-5164Show/hide
Query:  MTTQKQSWEAQQSQQMQRVKSSGMISSHVNAIGSPLKEDQEEELSRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRK
        M T +Q  E  QS  +QR+KSSG IS +    GSP+ +++EEELS+SA ALF+AKE+EIER+KME++++V+ +LG AEEAT+RLAEIREELE +TDPMRK
Subjt:  MTTQKQSWEAQQSQQMQRVKSSGMISSHVNAIGSPLKEDQEEELSRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRK

Query:  EVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVAKLMELVNESEKLRMKKLEELSKNIDI
        E+S IRK++D +N+ELKPLG +CQ+KERE+KE L+ +NEKNKEK+  V+KL+ELV ESEKLRM KLEELSK+I+I
Subjt:  EVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVAKLMELVNESEKLRMKKLEELSKNIDI

AT2G36410.2 Family of unknown function (DUF662)8.2e-4662.79Show/hide
Query:  TQKQSWEAQQSQQMQRVKSSGMISSHVNAIGSPLKEDQEEELSRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEV
        +Q Q    QQS +M     S   SSH++         ++EE++RSAL+ FRAKE+EIE+++ME+RE+++A+LGR E+ TKRL+ IREELE M DPMRKEV
Subjt:  TQKQSWEAQQSQQMQRVKSSGMISSHVNAIGSPLKEDQEEELSRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEV

Query:  SFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVAKLMELVNESEKLRMKKLEELSKNID
        S +RKKID VNKELKPLG T QKKEREYKE LD FNEKN+EK QL+ KLMELV ESEKLRM KLEELSK+I+
Subjt:  SFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVAKLMELVNESEKLRMKKLEELSKNID

AT2G36410.3 Family of unknown function (DUF662)2.6e-4461.63Show/hide
Query:  TQKQSWEAQQSQQMQRVKSSGMISSHVNAIGSPLKEDQEEELSRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEV
        +Q Q    QQS +M     S   SSH++         ++EE++RSAL+ FRAKE+EIE+++ME+RE+++A+LGR E+ TKRL+ IREELE M DPMRKEV
Subjt:  TQKQSWEAQQSQQMQRVKSSGMISSHVNAIGSPLKEDQEEELSRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEV

Query:  SFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVAKLMELVNESEKLRMKKLEELSKNID
        S +RKKID VNKELKPLG T QKK  EYKE LD FNEKN+EK QL+ KLMELV ESEKLRM KLEELSK+I+
Subjt:  SFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVAKLMELVNESEKLRMKKLEELSKNID

AT3G09980.1 Family of unknown function (DUF662)3.6e-4975.36Show/hide
Query:  QEEELSRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNE
        ++EE+SR+AL+ FRAKEEEIE+KKME+RE+V+A+LGR EE TKRLA IREELEG+ DPMRKEV+ +RKKID VNKELKPLG T QKKEREYKE L+ FNE
Subjt:  QEEELSRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNE

Query:  KNKEKSQLVAKLMELVNESEKLRMKKLEELSKNIDILH
        KN+EK QL+ +LMELV ESEK+RMKKLEELSKNID +H
Subjt:  KNKEKSQLVAKLMELVNESEKLRMKKLEELSKNIDILH

AT3G52920.2 Family of unknown function (DUF662)1.1e-4563.79Show/hide
Query:  MTTQKQSWEAQQSQQMQRVKSSGMISSHVNAIGSPLKEDQEEELSRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRK
        MTT  ++   Q  QQM  +  S  +S          KED  EE++RSAL+ FRAKE+EIE++KME+RE+V+A+LGR EE T+RLA IREELE M DPMRK
Subjt:  MTTQKQSWEAQQSQQMQRVKSSGMISSHVNAIGSPLKEDQEEELSRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRK

Query:  EVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVAKLMELVNESEKLRMKKLEELSKNID
        EV+++RKKID VNKELKPLG T QKKEREYKE LD FNEKN+EK QL+ KLMELV ESEKLR+KKL+ELS++ID
Subjt:  EVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVAKLMELVNESEKLRMKKLEELSKNID


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGACGCAGAAACAGAGCTGGGAAGCGCAACAATCGCAACAGATGCAGAGGGTGAAGAGCTCGGGGATGATAAGCAGCCATGTGAATGCGATTGGGAGTCCGTTGAA
GGAGGATCAAGAGGAGGAGCTTTCGCGATCGGCGTTGGCTCTGTTCAGAGCTAAGGAAGAGGAGATCGAGAGGAAGAAGATGGAGATGAGAGAAAAGGTGGAAGCTCGCC
TTGGAAGAGCTGAAGAAGCAACGAAGCGATTGGCGGAGATTCGCGAAGAACTTGAAGGAATGACGGATCCGATGAGGAAGGAAGTTTCGTTCATACGGAAGAAGATTGAT
TTGGTCAACAAAGAGTTGAAGCCATTGGGACTCACTTGCCAAAAGAAGGAGAGAGAATACAAAGAAGTCCTAGATTTATTTAACGAGAAGAACAAAGAGAAATCTCAATT
GGTAGCCAAACTAATGGAGTTGGTGAATGAGAGCGAAAAATTGAGGATGAAGAAGTTGGAAGAGCTGAGCAAGAACATTGACATCCTTCATTAA
mRNA sequenceShow/hide mRNA sequence
ATGACGACGCAGAAACAGAGCTGGGAAGCGCAACAATCGCAACAGATGCAGAGGGTGAAGAGCTCGGGGATGATAAGCAGCCATGTGAATGCGATTGGGAGTCCGTTGAA
GGAGGATCAAGAGGAGGAGCTTTCGCGATCGGCGTTGGCTCTGTTCAGAGCTAAGGAAGAGGAGATCGAGAGGAAGAAGATGGAGATGAGAGAAAAGGTGGAAGCTCGCC
TTGGAAGAGCTGAAGAAGCAACGAAGCGATTGGCGGAGATTCGCGAAGAACTTGAAGGAATGACGGATCCGATGAGGAAGGAAGTTTCGTTCATACGGAAGAAGATTGAT
TTGGTCAACAAAGAGTTGAAGCCATTGGGACTCACTTGCCAAAAGAAGGAGAGAGAATACAAAGAAGTCCTAGATTTATTTAACGAGAAGAACAAAGAGAAATCTCAATT
GGTAGCCAAACTAATGGAGTTGGTGAATGAGAGCGAAAAATTGAGGATGAAGAAGTTGGAAGAGCTGAGCAAGAACATTGACATCCTTCATTAA
Protein sequenceShow/hide protein sequence
MTTQKQSWEAQQSQQMQRVKSSGMISSHVNAIGSPLKEDQEEELSRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKID
LVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVAKLMELVNESEKLRMKKLEELSKNIDILH