; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10018162 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10018162
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionDNA/RNA polymerases superfamily protein
Genome locationChr04:1130382..1131740
RNA-Seq ExpressionHG10018162
SyntenyHG10018162
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031952.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]3.1e-0942.17Show/hide
Query:  STIEIKNVEQGNIFLNFGDIEEVDLPSIIHGELFVYDYTNPIDLFRLNQVMQDEGVVPFPQKLDFNFLAYLQNFPSFSRNPFD
        +TIEI +  +GNIFLNFG I   + PS + G+LF ++++N +D+ RL+QVM+DEG+        F++L    + PS  RNP++
Subjt:  STIEIKNVEQGNIFLNFGDIEEVDLPSIIHGELFVYDYTNPIDLFRLNQVMQDEGVVPFPQKLDFNFLAYLQNFPSFSRNPFD

KAA0040615.1 uncharacterized protein E6C27_scaffold262G001920 [Cucumis melo var. makuwa]1.7e-0727.94Show/hide
Query:  STIEIKNVEQGNIFLNFGDIEEVDLPSIIHGELFVYDYTNPIDLFRLNQVMQDEGVVPFPQKLDFNF-LAYLQNFPSFSRNPFDPLSKEDTQLLESY--L
        +T+E+++  QGNIF NFGD E ++ P +  G +F+ D+ NPIDL RLNQV+ DE          + F L + QN  S    P  P  K    ++E +  L
Subjt:  STIEIKNVEQGNIFLNFGDIEEVDLPSIIHGELFVYDYTNPIDLFRLNQVMQDEGVVPFPQKLDFNF-LAYLQNFPSFSRNPFDPLSKEDTQLLESY--L

Query:  DSKLVNKVAASSCVNLLPKKYSMFHPEVEEDGVNNKQDLAKADFVMKERDFPIVALLNHSSAGIPKANLITASQFY-YSRKKGTEESTLTIINNDVGRKD
           L+ K+  S      PKK +       +  VN+ +++ K   +M E+      +  + ++ + K ++         S KK  ++++  I +N +    
Subjt:  DSKLVNKVAASSCVNLLPKKYSMFHPEVEEDGVNNKQDLAKADFVMKERDFPIVALLNHSSAGIPKANLITASQFY-YSRKKGTEESTLTIINNDVGRKD

Query:  TSFS
         S S
Subjt:  TSFS

TYK16775.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]3.1e-0942.17Show/hide
Query:  STIEIKNVEQGNIFLNFGDIEEVDLPSIIHGELFVYDYTNPIDLFRLNQVMQDEGVVPFPQKLDFNFLAYLQNFPSFSRNPFD
        +TIEI +  +GNIFLNFG I   + PS + G+LF ++++N +D+ RL+QVM+DEG+        F++L    + PS  RNP++
Subjt:  STIEIKNVEQGNIFLNFGDIEEVDLPSIIHGELFVYDYTNPIDLFRLNQVMQDEGVVPFPQKLDFNFLAYLQNFPSFSRNPFD

XP_016903436.1 PREDICTED: uncharacterized protein LOC107992196 [Cucumis melo]8.5e-0727.72Show/hide
Query:  IEIKNVEQGNIFLNFGDIEEVDLPSIIHGELFVYDYTNPIDLFRLNQVMQDEGVVPFPQKLDFNF-LAYLQNFPSFSRNPFDPLSKEDTQLLESY--LDS
        +E+++  QGNIF NFGD E ++ P +  G +F+ D+ NPIDL RLNQV+ DE          + F L + QN  S    P  P  K    ++E +  L  
Subjt:  IEIKNVEQGNIFLNFGDIEEVDLPSIIHGELFVYDYTNPIDLFRLNQVMQDEGVVPFPQKLDFNF-LAYLQNFPSFSRNPFDPLSKEDTQLLESY--LDS

Query:  KLVNKVAASSCVNLLPKKYSMFHPEVEEDGVNNKQDLAKADFVMKERDFPIVALLNHSSAGIPKANLITASQFY-YSRKKGTEESTLTIINNDVGRKDTS
         L+ K+  S      PKK +       +  VN+ +++ K   +M E+      +  + ++ + K ++         S KK  ++++  I +N +     S
Subjt:  KLVNKVAASSCVNLLPKKYSMFHPEVEEDGVNNKQDLAKADFVMKERDFPIVALLNHSSAGIPKANLITASQFY-YSRKKGTEESTLTIINNDVGRKDTS

Query:  FS
         S
Subjt:  FS

XP_038904899.1 uncharacterized protein LOC120091119 isoform X2 [Benincasa hispida]1.8e-0946.91Show/hide
Query:  STIEIKNVEQGNIFLNFGDIEEVDLPSIIHGELFVYDYTNPIDLFRLNQVMQDEGVVPFPQKLDFNFLAYLQNFPSFSRNP
        +TIE+ N ++G+I+LNFGDI   + PS + G+LF  D+TNPIDL RLN+V   EG+   P    FNFL         SR+P
Subjt:  STIEIKNVEQGNIFLNFGDIEEVDLPSIIHGELFVYDYTNPIDLFRLNQVMQDEGVVPFPQKLDFNFLAYLQNFPSFSRNP

TrEMBL top hitse value%identityAlignment
A0A1S4E5E1 uncharacterized protein LOC1079921964.1e-0727.72Show/hide
Query:  IEIKNVEQGNIFLNFGDIEEVDLPSIIHGELFVYDYTNPIDLFRLNQVMQDEGVVPFPQKLDFNF-LAYLQNFPSFSRNPFDPLSKEDTQLLESY--LDS
        +E+++  QGNIF NFGD E ++ P +  G +F+ D+ NPIDL RLNQV+ DE          + F L + QN  S    P  P  K    ++E +  L  
Subjt:  IEIKNVEQGNIFLNFGDIEEVDLPSIIHGELFVYDYTNPIDLFRLNQVMQDEGVVPFPQKLDFNF-LAYLQNFPSFSRNPFDPLSKEDTQLLESY--LDS

Query:  KLVNKVAASSCVNLLPKKYSMFHPEVEEDGVNNKQDLAKADFVMKERDFPIVALLNHSSAGIPKANLITASQFY-YSRKKGTEESTLTIINNDVGRKDTS
         L+ K+  S      PKK +       +  VN+ +++ K   +M E+      +  + ++ + K ++         S KK  ++++  I +N +     S
Subjt:  KLVNKVAASSCVNLLPKKYSMFHPEVEEDGVNNKQDLAKADFVMKERDFPIVALLNHSSAGIPKANLITASQFY-YSRKKGTEESTLTIINNDVGRKDTS

Query:  FS
         S
Subjt:  FS

A0A5A7SLN9 Retrotransposable element Tf21.5e-0942.17Show/hide
Query:  STIEIKNVEQGNIFLNFGDIEEVDLPSIIHGELFVYDYTNPIDLFRLNQVMQDEGVVPFPQKLDFNFLAYLQNFPSFSRNPFD
        +TIEI +  +GNIFLNFG I   + PS + G+LF ++++N +D+ RL+QVM+DEG+        F++L    + PS  RNP++
Subjt:  STIEIKNVEQGNIFLNFGDIEEVDLPSIIHGELFVYDYTNPIDLFRLNQVMQDEGVVPFPQKLDFNFLAYLQNFPSFSRNPFD

A0A5A7V878 DUF4283 domain-containing protein2.3e-0541.67Show/hide
Query:  MSSTIEIKNVEQGNIFLNFGDIEEVDLPSIIHGELFVYDYTNPIDLFRLNQVMQDE-GVVPFPQKLDFNFLA
        + + +E+++  + NIFLNFGDI+ ++ P +I   LF+    N IDL R+NQV+ DE G  P   KL++ FL+
Subjt:  MSSTIEIKNVEQGNIFLNFGDIEEVDLPSIIHGELFVYDYTNPIDLFRLNQVMQDE-GVVPFPQKLDFNFLA

A0A5D3C5I3 Uncharacterized protein8.3e-0827.94Show/hide
Query:  STIEIKNVEQGNIFLNFGDIEEVDLPSIIHGELFVYDYTNPIDLFRLNQVMQDEGVVPFPQKLDFNF-LAYLQNFPSFSRNPFDPLSKEDTQLLESY--L
        +T+E+++  QGNIF NFGD E ++ P +  G +F+ D+ NPIDL RLNQV+ DE          + F L + QN  S    P  P  K    ++E +  L
Subjt:  STIEIKNVEQGNIFLNFGDIEEVDLPSIIHGELFVYDYTNPIDLFRLNQVMQDEGVVPFPQKLDFNF-LAYLQNFPSFSRNPFDPLSKEDTQLLESY--L

Query:  DSKLVNKVAASSCVNLLPKKYSMFHPEVEEDGVNNKQDLAKADFVMKERDFPIVALLNHSSAGIPKANLITASQFY-YSRKKGTEESTLTIINNDVGRKD
           L+ K+  S      PKK +       +  VN+ +++ K   +M E+      +  + ++ + K ++         S KK  ++++  I +N +    
Subjt:  DSKLVNKVAASSCVNLLPKKYSMFHPEVEEDGVNNKQDLAKADFVMKERDFPIVALLNHSSAGIPKANLITASQFY-YSRKKGTEESTLTIINNDVGRKD

Query:  TSFS
         S S
Subjt:  TSFS

A0A5D3CZ35 DNA/RNA polymerases superfamily protein1.5e-0942.17Show/hide
Query:  STIEIKNVEQGNIFLNFGDIEEVDLPSIIHGELFVYDYTNPIDLFRLNQVMQDEGVVPFPQKLDFNFLAYLQNFPSFSRNPFD
        +TIEI +  +GNIFLNFG I   + PS + G+LF ++++N +D+ RL+QVM+DEG+        F++L    + PS  RNP++
Subjt:  STIEIKNVEQGNIFLNFGDIEEVDLPSIIHGELFVYDYTNPIDLFRLNQVMQDEGVVPFPQKLDFNFLAYLQNFPSFSRNPFD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCGACAATAGAGATTAAAAATGTGGAACAGGGCAATATTTTCTTAAACTTTGGTGATATAGAGGAAGTTGATCTTCCAAGTATTATTCATGGGGAGCTATTTGT
TTACGATTATACAAATCCCATCGACTTATTTCGATTAAACCAAGTTATGCAAGATGAAGGTGTTGTTCCTTTTCCTCAAAAGTTGGATTTTAATTTTCTTGCTTATCTTC
AAAATTTTCCAAGTTTCTCAAGGAATCCATTTGATCCACTCTCAAAAGAGGATACCCAATTGTTAGAGTCCTACTTGGATTCAAAGCTGGTAAATAAGGTTGCTGCTTCT
TCATGTGTTAATTTGCTGCCCAAAAAATATAGTATGTTTCATCCGGAGGTTGAAGAAGATGGTGTGAACAACAAACAAGATTTGGCTAAGGCAGATTTTGTGATGAAAGA
GAGAGATTTCCCAATCGTTGCTCTTCTCAACCACTCGAGTGCTGGAATTCCAAAAGCCAACCTTATTACAGCTTCTCAATTTTACTACTCTCGGAAAAAAGGGACTGAAG
AGTCAACTTTAACAATCATTAACAATGATGTTGGTCGAAAGGACACCTCATTCTCTGGGATGTTAAAGAACCATCTCTCTCCAAAATCCGTTGAGCATTCGCATTTAGCA
TCTCATTTCAAAAACGATGATGTCAACTCAAATGTTATAGAGGAAAGATGTGTTCTTGTGCAAGTCCCTTCATTGGCAGCTAGAAGGTCAAGTTTAATCCCTTCAAATTC
TCATTCTTCGCAAGTTTTTTCCAGATCTCATATCTCATTTCGAAATTCAAATGTGAGATTGATTAAGGAAGTTCCTAGTGTTTTGTCACTAAAAACTTCCAAGTCTCATG
ATGATTATGATGACGATTCAGTAGCAAGTGTAAGTAGTAATGAACATGACATTTTGGCTTTAAATTCAGCATCTGGAGAACTCCAATTTGAAGAGAATTTTGGGGAAGAT
ATAGCAGCGCTTTACCAAAGTCCGACCAAGGAGAATTCTGGTCAGAAGCCATTGATGTTCTCCCATTATCCCCTTCTCAAATCCCTTCTAAATTTTCTTCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTTCGACAATAGAGATTAAAAATGTGGAACAGGGCAATATTTTCTTAAACTTTGGTGATATAGAGGAAGTTGATCTTCCAAGTATTATTCATGGGGAGCTATTTGT
TTACGATTATACAAATCCCATCGACTTATTTCGATTAAACCAAGTTATGCAAGATGAAGGTGTTGTTCCTTTTCCTCAAAAGTTGGATTTTAATTTTCTTGCTTATCTTC
AAAATTTTCCAAGTTTCTCAAGGAATCCATTTGATCCACTCTCAAAAGAGGATACCCAATTGTTAGAGTCCTACTTGGATTCAAAGCTGGTAAATAAGGTTGCTGCTTCT
TCATGTGTTAATTTGCTGCCCAAAAAATATAGTATGTTTCATCCGGAGGTTGAAGAAGATGGTGTGAACAACAAACAAGATTTGGCTAAGGCAGATTTTGTGATGAAAGA
GAGAGATTTCCCAATCGTTGCTCTTCTCAACCACTCGAGTGCTGGAATTCCAAAAGCCAACCTTATTACAGCTTCTCAATTTTACTACTCTCGGAAAAAAGGGACTGAAG
AGTCAACTTTAACAATCATTAACAATGATGTTGGTCGAAAGGACACCTCATTCTCTGGGATGTTAAAGAACCATCTCTCTCCAAAATCCGTTGAGCATTCGCATTTAGCA
TCTCATTTCAAAAACGATGATGTCAACTCAAATGTTATAGAGGAAAGATGTGTTCTTGTGCAAGTCCCTTCATTGGCAGCTAGAAGGTCAAGTTTAATCCCTTCAAATTC
TCATTCTTCGCAAGTTTTTTCCAGATCTCATATCTCATTTCGAAATTCAAATGTGAGATTGATTAAGGAAGTTCCTAGTGTTTTGTCACTAAAAACTTCCAAGTCTCATG
ATGATTATGATGACGATTCAGTAGCAAGTGTAAGTAGTAATGAACATGACATTTTGGCTTTAAATTCAGCATCTGGAGAACTCCAATTTGAAGAGAATTTTGGGGAAGAT
ATAGCAGCGCTTTACCAAAGTCCGACCAAGGAGAATTCTGGTCAGAAGCCATTGATGTTCTCCCATTATCCCCTTCTCAAATCCCTTCTAAATTTTCTTCTTTGA
Protein sequenceShow/hide protein sequence
MSSTIEIKNVEQGNIFLNFGDIEEVDLPSIIHGELFVYDYTNPIDLFRLNQVMQDEGVVPFPQKLDFNFLAYLQNFPSFSRNPFDPLSKEDTQLLESYLDSKLVNKVAAS
SCVNLLPKKYSMFHPEVEEDGVNNKQDLAKADFVMKERDFPIVALLNHSSAGIPKANLITASQFYYSRKKGTEESTLTIINNDVGRKDTSFSGMLKNHLSPKSVEHSHLA
SHFKNDDVNSNVIEERCVLVQVPSLAARRSSLIPSNSHSSQVFSRSHISFRNSNVRLIKEVPSVLSLKTSKSHDDYDDDSVASVSSNEHDILALNSASGELQFEENFGED
IAALYQSPTKENSGQKPLMFSHYPLLKSLLNFLL