; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10018175 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10018175
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionrecQ-mediated genome instability protein 2
Genome locationChr04:1307545..1310035
RNA-Seq ExpressionHG10018175
SyntenyHG10018175
Gene Ontology termsGO:0009555 - pollen development (biological process)
GO:0033045 - regulation of sister chromatid segregation (biological process)
GO:0043007 - maintenance of rDNA (biological process)
GO:2000042 - negative regulation of double-strand break repair via homologous recombination (biological process)
GO:0005829 - cytosol (cellular component)
GO:0016607 - nuclear speck (cellular component)
InterPro domainsIPR032245 - RecQ-mediated genome instability protein 2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008462275.1 PREDICTED: recQ-mediated genome instability protein 2 [Cucumis melo]3.5e-5988.81Show/hide
Query:  MDYSLAALKLLCRQLKDARQTPSNNAATLGGILFQRAWLQGILVSVEKENGKLILDDGTGTVELSLSRDFRLRPWSLGMYVMVVGAFVVRTNEPPIIAVH
        MDYSLAALKLLCRQLKDAR TPS+  ATL GILFQRAWLQGILVSV+KENGKLILDDGTGTVELSL R+F LRPWSLGMYVMVVGAF+ RTNEPP I+VH
Subjt:  MDYSLAALKLLCRQLKDARQTPSNNAATLGGILFQRAWLQGILVSVEKENGKLILDDGTGTVELSLSRDFRLRPWSLGMYVMVVGAFVVRTNEPPIIAVH

Query:  KIVDLSKFPVREAMWYLEVMEAYKMFYEPLVEEF
        KIVDLSK P REAMWYLEVMEAYKMFYEPLVEEF
Subjt:  KIVDLSKFPVREAMWYLEVMEAYKMFYEPLVEEF

XP_022152884.1 recQ-mediated genome instability protein 2 isoform X1 [Momordica charantia]6.0e-5985.82Show/hide
Query:  MDYSLAALKLLCRQLKDARQTPSNNAATLGGILFQRAWLQGILVSVEKENGKLILDDGTGTVELSLSRDFRLRPWSLGMYVMVVGAFVVRTNEPPIIAVH
        MDYSLAALK+LC QL  AR TPS +AATLGGILFQRAWLQGILVSV+K N +L+LDDGTGTVELSLSRDFRLRPW+LGMYVMVVGAFV+R NEPPII VH
Subjt:  MDYSLAALKLLCRQLKDARQTPSNNAATLGGILFQRAWLQGILVSVEKENGKLILDDGTGTVELSLSRDFRLRPWSLGMYVMVVGAFVVRTNEPPIIAVH

Query:  KIVDLSKFPVREAMWYLEVMEAYKMFYEPLVEEF
        KIVDLS+FP REAMWYLEVMEAYKMFYEPL+EEF
Subjt:  KIVDLSKFPVREAMWYLEVMEAYKMFYEPLVEEF

XP_022964663.1 uncharacterized protein LOC111464675 isoform X1 [Cucurbita moschata]1.0e-6191.11Show/hide
Query:  MDYSLAALKLLCRQLKDARQTPSNNAATLGGILFQRAWLQGILVSVEKENGKLILDDGTGTVELSLSRDFRLRPWSLGMYVMVVGAFVVRTNEPPIIAVH
        MDYSLAALKLLCRQL DARQ PSNNAATLGGILFQRAWLQGILV V+++NGKLILDDGTGTVELSLS DFR RPWSLGMYVMVVGA+VVRTNEP IIAVH
Subjt:  MDYSLAALKLLCRQLKDARQTPSNNAATLGGILFQRAWLQGILVSVEKENGKLILDDGTGTVELSLSRDFRLRPWSLGMYVMVVGAFVVRTNEPPIIAVH

Query:  KIVDLSKFPVREAMWYLEVMEAYKMFYEPLVEEFS
        KIVDLS FP REAMWYLEVMEAYKMFYEPLVEEFS
Subjt:  KIVDLSKFPVREAMWYLEVMEAYKMFYEPLVEEFS

XP_022970350.1 uncharacterized protein LOC111469342 [Cucurbita maxima]4.5e-6291.11Show/hide
Query:  MDYSLAALKLLCRQLKDARQTPSNNAATLGGILFQRAWLQGILVSVEKENGKLILDDGTGTVELSLSRDFRLRPWSLGMYVMVVGAFVVRTNEPPIIAVH
        MDY+LAALKLLCRQL DARQ PSNNAATLGGILFQRAWLQGILV V+++NGKLILDDGTGTVELSLS DFR RPWSLGMYVMVVGA+VVRTNEP IIAVH
Subjt:  MDYSLAALKLLCRQLKDARQTPSNNAATLGGILFQRAWLQGILVSVEKENGKLILDDGTGTVELSLSRDFRLRPWSLGMYVMVVGAFVVRTNEPPIIAVH

Query:  KIVDLSKFPVREAMWYLEVMEAYKMFYEPLVEEFS
        KIVDLSKFP REAMWYLEVMEAYKMFYEPLVEEFS
Subjt:  KIVDLSKFPVREAMWYLEVMEAYKMFYEPLVEEFS

XP_038894076.1 uncharacterized protein LOC120082820 [Benincasa hispida]1.8e-6391.85Show/hide
Query:  MDYSLAALKLLCRQLKDARQTPSNNAATLGGILFQRAWLQGILVSVEKENGKLILDDGTGTVELSLSRDFRLRPWSLGMYVMVVGAFVVRTNEPPIIAVH
        MDYSLAALKLLCRQLKDARQ+P+NNAATLGGILFQRAWLQG LVSV+KEN KLILDDGTGTVELSLSRDFRLRPW LGMYVMVVGAFV RTNEPP+IAVH
Subjt:  MDYSLAALKLLCRQLKDARQTPSNNAATLGGILFQRAWLQGILVSVEKENGKLILDDGTGTVELSLSRDFRLRPWSLGMYVMVVGAFVVRTNEPPIIAVH

Query:  KIVDLSKFPVREAMWYLEVMEAYKMFYEPLVEEFS
        KIVDLSKFP REAMWYLEV+EAYKMFYEPL+EEFS
Subjt:  KIVDLSKFPVREAMWYLEVMEAYKMFYEPLVEEFS

TrEMBL top hitse value%identityAlignment
A0A1S3CGI5 recQ-mediated genome instability protein 21.7e-5988.81Show/hide
Query:  MDYSLAALKLLCRQLKDARQTPSNNAATLGGILFQRAWLQGILVSVEKENGKLILDDGTGTVELSLSRDFRLRPWSLGMYVMVVGAFVVRTNEPPIIAVH
        MDYSLAALKLLCRQLKDAR TPS+  ATL GILFQRAWLQGILVSV+KENGKLILDDGTGTVELSL R+F LRPWSLGMYVMVVGAF+ RTNEPP I+VH
Subjt:  MDYSLAALKLLCRQLKDARQTPSNNAATLGGILFQRAWLQGILVSVEKENGKLILDDGTGTVELSLSRDFRLRPWSLGMYVMVVGAFVVRTNEPPIIAVH

Query:  KIVDLSKFPVREAMWYLEVMEAYKMFYEPLVEEF
        KIVDLSK P REAMWYLEVMEAYKMFYEPLVEEF
Subjt:  KIVDLSKFPVREAMWYLEVMEAYKMFYEPLVEEF

A0A5A7UD07 RecQ-mediated genome instability protein 21.7e-5988.81Show/hide
Query:  MDYSLAALKLLCRQLKDARQTPSNNAATLGGILFQRAWLQGILVSVEKENGKLILDDGTGTVELSLSRDFRLRPWSLGMYVMVVGAFVVRTNEPPIIAVH
        MDYSLAALKLLCRQLKDAR TPS+  ATL GILFQRAWLQGILVSV+KENGKLILDDGTGTVELSL R+F LRPWSLGMYVMVVGAF+ RTNEPP I+VH
Subjt:  MDYSLAALKLLCRQLKDARQTPSNNAATLGGILFQRAWLQGILVSVEKENGKLILDDGTGTVELSLSRDFRLRPWSLGMYVMVVGAFVVRTNEPPIIAVH

Query:  KIVDLSKFPVREAMWYLEVMEAYKMFYEPLVEEF
        KIVDLSK P REAMWYLEVMEAYKMFYEPLVEEF
Subjt:  KIVDLSKFPVREAMWYLEVMEAYKMFYEPLVEEF

A0A6J1DF83 recQ-mediated genome instability protein 2 isoform X12.9e-5985.82Show/hide
Query:  MDYSLAALKLLCRQLKDARQTPSNNAATLGGILFQRAWLQGILVSVEKENGKLILDDGTGTVELSLSRDFRLRPWSLGMYVMVVGAFVVRTNEPPIIAVH
        MDYSLAALK+LC QL  AR TPS +AATLGGILFQRAWLQGILVSV+K N +L+LDDGTGTVELSLSRDFRLRPW+LGMYVMVVGAFV+R NEPPII VH
Subjt:  MDYSLAALKLLCRQLKDARQTPSNNAATLGGILFQRAWLQGILVSVEKENGKLILDDGTGTVELSLSRDFRLRPWSLGMYVMVVGAFVVRTNEPPIIAVH

Query:  KIVDLSKFPVREAMWYLEVMEAYKMFYEPLVEEF
        KIVDLS+FP REAMWYLEVMEAYKMFYEPL+EEF
Subjt:  KIVDLSKFPVREAMWYLEVMEAYKMFYEPLVEEF

A0A6J1HLJ4 uncharacterized protein LOC111464675 isoform X14.8e-6291.11Show/hide
Query:  MDYSLAALKLLCRQLKDARQTPSNNAATLGGILFQRAWLQGILVSVEKENGKLILDDGTGTVELSLSRDFRLRPWSLGMYVMVVGAFVVRTNEPPIIAVH
        MDYSLAALKLLCRQL DARQ PSNNAATLGGILFQRAWLQGILV V+++NGKLILDDGTGTVELSLS DFR RPWSLGMYVMVVGA+VVRTNEP IIAVH
Subjt:  MDYSLAALKLLCRQLKDARQTPSNNAATLGGILFQRAWLQGILVSVEKENGKLILDDGTGTVELSLSRDFRLRPWSLGMYVMVVGAFVVRTNEPPIIAVH

Query:  KIVDLSKFPVREAMWYLEVMEAYKMFYEPLVEEFS
        KIVDLS FP REAMWYLEVMEAYKMFYEPLVEEFS
Subjt:  KIVDLSKFPVREAMWYLEVMEAYKMFYEPLVEEFS

A0A6J1I0C8 uncharacterized protein LOC1114693422.2e-6291.11Show/hide
Query:  MDYSLAALKLLCRQLKDARQTPSNNAATLGGILFQRAWLQGILVSVEKENGKLILDDGTGTVELSLSRDFRLRPWSLGMYVMVVGAFVVRTNEPPIIAVH
        MDY+LAALKLLCRQL DARQ PSNNAATLGGILFQRAWLQGILV V+++NGKLILDDGTGTVELSLS DFR RPWSLGMYVMVVGA+VVRTNEP IIAVH
Subjt:  MDYSLAALKLLCRQLKDARQTPSNNAATLGGILFQRAWLQGILVSVEKENGKLILDDGTGTVELSLSRDFRLRPWSLGMYVMVVGAFVVRTNEPPIIAVH

Query:  KIVDLSKFPVREAMWYLEVMEAYKMFYEPLVEEFS
        KIVDLSKFP REAMWYLEVMEAYKMFYEPLVEEFS
Subjt:  KIVDLSKFPVREAMWYLEVMEAYKMFYEPLVEEFS

SwissProt top hitse value%identityAlignment
A5PJU7 RecQ-mediated genome instability protein 23.1e-0534.38Show/hide
Query:  LKLLCRQL-KDARQTPSN---NAATLG--GILFQRAWLQGILVSVEKENGKLILDDGTGTVEL-SLSRDFRLRPWSL-GMYVMVVGAFVVRTNEPPIIAV
        +K+L  QL +DA   P +   + A +G   +  +  W+QG +  VE   G   L D +G+  +  L R  R RP  + G YVMV+G     + EP + AV
Subjt:  LKLLCRQL-KDARQTPSN---NAATLG--GILFQRAWLQGILVSVEKENGKLILDDGTGTVEL-SLSRDFRLRPWSL-GMYVMVVGAFVVRTNEPPIIAV

Query:  HKIVDLSKFPVREAMWYLEVMEAYKMFY
         K+ DLS  P+ E++W LEV + ++  Y
Subjt:  HKIVDLSKFPVREAMWYLEVMEAYKMFY

Q3UPE3 RecQ-mediated genome instability protein 21.8e-0540.45Show/hide
Query:  WLQGILVSVEKENGKLILDDGTGTVEL-SLSRDFRLRPWSL-GMYVMVVGAFVVRTNEPPIIAVHKIVDLSKFPVREAMWYLEVMEAYK
        W+QG +++   E G+  L D +G   +  L R  R RP  L G YVMV+G     + EP + AV K+ DLS  PV E+MW LEV + ++
Subjt:  WLQGILVSVEKENGKLILDDGTGTVEL-SLSRDFRLRPWSL-GMYVMVVGAFVVRTNEPPIIAVHKIVDLSKFPVREAMWYLEVMEAYK

Q5ZM20 RecQ-mediated genome instability protein 21.2e-0635.16Show/hide
Query:  LKLLCRQLKDARQTP------SNNAATLGGILFQRAWLQGILVSVEK-ENGKLILDDGTGTVELSLSRDF-RLRP-WSLGMYVMVVGAFVVRTNEP-PII
        LK+L  QL+ A +        S        +  +  W+QG ++ VE+   G   L DG+G   +    D  R RP  S G YVMV+G  +VR   P P++
Subjt:  LKLLCRQLKDARQTP------SNNAATLGGILFQRAWLQGILVSVEK-ENGKLILDDGTGTVELSLSRDF-RLRP-WSLGMYVMVVGAFVVRTNEP-PII

Query:  AVHKIVDLSKFPVREAMWYLEVMEAYKM
           K+ DLS+ PV E MW LEV E +++
Subjt:  AVHKIVDLSKFPVREAMWYLEVMEAYKM

Q96E14 RecQ-mediated genome instability protein 21.2e-0636.29Show/hide
Query:  LKLLCRQL-KDARQTP-----SNNAATLGGILFQRAWLQGILVSVEKENGKLILDDGTGTVELSLSRDFRLRPWSL-GMYVMVVGAFVVRTNEPPIIAVH
        LK+L  QL +DA   P     S  AA  G +     W+QG +V  ++   +L    G  +V   L R  R RP  + G YVMV+G     + EP + AV 
Subjt:  LKLLCRQL-KDARQTP-----SNNAATLGGILFQRAWLQGILVSVEKENGKLILDDGTGTVELSLSRDFRLRPWSL-GMYVMVVGAFVVRTNEPPIIAVH

Query:  KIVDLSKFPVREAMWYLEVMEAYK
        K+ DLS  P+ E+MW LEV + ++
Subjt:  KIVDLSKFPVREAMWYLEVMEAYK

Arabidopsis top hitse value%identityAlignment
AT1G08390.1 unknown protein3.9e-4865.69Show/hide
Query:  MDYSLAALKLLCRQLKDARQTPSNNAATLGGILFQRAWLQGILVSVEKENGK--LILDDGTGTVELSLSRDFRLRPWSLGMYVMVVGAFVVRTNEPPIIA
        MDYSLAA+K+LC QL+DA+ TPS NAA+LGG+LFQRAWLQG+LV      G   L+LDDGTG +EL L+ DF LR W  GMYVMVVG + VRT + P++ 
Subjt:  MDYSLAALKLLCRQLKDARQTPSNNAATLGGILFQRAWLQGILVSVEKENGK--LILDDGTGTVELSLSRDFRLRPWSLGMYVMVVGAFVVRTNEPPIIA

Query:  VHKIVDLSKFPVREAMWYLEVMEAYKMFYEPLVEEFS
        VHK+VDLS  P REAMWYLEVM+AY++FYEPL++EFS
Subjt:  VHKIVDLSKFPVREAMWYLEVMEAYKMFYEPLVEEFS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTACAGCTTAGCAGCGTTGAAGCTTCTGTGCCGGCAGCTCAAAGACGCCCGCCAAACTCCGTCCAACAATGCCGCCACTCTCGGCGGCATTCTCTTCCAA
CGCGCCTGGCTTCAGGGGATTTTGGTCTCCGTCGAAAAAGAAAATGGTAAATTGATTCTCGACGACGGCACCGGCACCGTCGAGCTATCTCTCTCTCGCGACTTC
CGTCTCCGCCCTTGGAGCCTCGGGATGTATGTGATGGTTGTTGGCGCTTTTGTCGTCCGGACGAATGAACCGCCCATTATTGCGGTTCACAAGATTGTTGATCTT
TCAAAATTTCCTGTTCGAGAGGCAATGTGGTACCTTGAAGTCATGGAAGCATACAAAATGTTTTATGAACCTCTGGTTGAAGAATTTTCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATTACAGCTTAGCAGCGTTGAAGCTTCTGTGCCGGCAGCTCAAAGACGCCCGCCAAACTCCGTCCAACAATGCCGCCACTCTCGGCGGCATTCTCTTCCAA
CGCGCCTGGCTTCAGGGGATTTTGGTCTCCGTCGAAAAAGAAAATGGTAAATTGATTCTCGACGACGGCACCGGCACCGTCGAGCTATCTCTCTCTCGCGACTTC
CGTCTCCGCCCTTGGAGCCTCGGGATGTATGTGATGGTTGTTGGCGCTTTTGTCGTCCGGACGAATGAACCGCCCATTATTGCGGTTCACAAGATTGTTGATCTT
TCAAAATTTCCTGTTCGAGAGGCAATGTGGTACCTTGAAGTCATGGAAGCATACAAAATGTTTTATGAACCTCTGGTTGAAGAATTTTCGTAA
Protein sequenceShow/hide protein sequence
MDYSLAALKLLCRQLKDARQTPSNNAATLGGILFQRAWLQGILVSVEKENGKLILDDGTGTVELSLSRDFRLRPWSLGMYVMVVGAFVVRTNEPPIIAVHKIVDL
SKFPVREAMWYLEVMEAYKMFYEPLVEEFS