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HG10018178 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10018178
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionCyclin-dependent protein kinase inhibitor SMR2
Genome locationChr04:1339479..1339811
RNA-Seq ExpressionHG10018178
SyntenyHG10018178
Gene Ontology termsGO:0032875 - regulation of DNA endoreduplication (biological process)
InterPro domainsIPR040389 - Cyclin-dependent protein kinase inhibitor SMR


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052125.1 cyclin-dependent protein kinase inhibitor SMR2 [Cucumis melo var. makuwa]8.2e-3879.09Show/hide
Query:  MSQFPKSDHQKELETPKSLEEGDRSKEEGGEEALPVAKDGDGESCRTPTSLRHRIPTARSCPTMPRKRKVVSKRKFSDQSFFEATGRGEVESLFGLFYRV
        MSQ  KSD +K LETPK+LE GDRS EEG  EAL  A+D +GESCRTPTSLRHRIP A+SCPT PRK++V  KRK SDQSFFEATGRGEVESLFGLFYRV
Subjt:  MSQFPKSDHQKELETPKSLEEGDRSKEEGGEEALPVAKDGDGESCRTPTSLRHRIPTARSCPTMPRKRKVVSKRKFSDQSFFEATGRGEVESLFGLFYRV

Query:  SSSKRRCTSV
        SSSKRRCTSV
Subjt:  SSSKRRCTSV

KAE8652786.1 hypothetical protein Csa_022878 [Cucumis sativus]7.9e-2572.22Show/hide
Query:  MSQFPKSDHQKELETPKSLEEGDRSKEEGGEEALPVAKDGDGESCRTPTSLRHRIPTARSCPTMPRKRKVVSKRKFSDQSFFEATGRGEV
        MSQF KSD QK LE P++ E GDRS EEG  EAL  A+  DGESCRTPTS +HRIP A+SCPT PRK++VV KRKFSDQSFFEATGRGE+
Subjt:  MSQFPKSDHQKELETPKSLEEGDRSKEEGGEEALPVAKDGDGESCRTPTSLRHRIPTARSCPTMPRKRKVVSKRKFSDQSFFEATGRGEV

KAG6583595.1 hypothetical protein SDJN03_19527, partial [Cucurbita argyrosperma subsp. sororia]1.2e-3378.38Show/hide
Query:  MSQFPKSDHQKELETPKSLEEGDRSKEE-GGEEALPVAKDGDGESCRTPTSLRHRIPTARSCPTMPRKRKVVSKRKFSDQSFFEATGRGEVESLFGLFYR
        MSQF KSDHQK  E PK  EEGDRSKEE GG EA+    D  GESCRTPTSLRHRIPTARS PT PRKRKV SKRKFSDQSFFE TGRGEVESLF LFYR
Subjt:  MSQFPKSDHQKELETPKSLEEGDRSKEE-GGEEALPVAKDGDGESCRTPTSLRHRIPTARSCPTMPRKRKVVSKRKFSDQSFFEATGRGEVESLFGLFYR

Query:  VSSSKRRCTSV
        VSS+KRR T++
Subjt:  VSSSKRRCTSV

KAG6586014.1 hypothetical protein SDJN03_18747, partial [Cucurbita argyrosperma subsp. sororia]4.5e-3676.36Show/hide
Query:  MSQFPKSDHQKELETPKSLEEGDRSKEEGGEEALPVAKDGDGESCRTPTSLRHRIPTARSCPTMPRKRKVVSKRKFSDQSFFEATGRGEVESLFGLFYRV
        MS+F  SDHQK LE  K  EE DRSKEE G EAL   +DG GESCRTP+SL+HRIP ARSCPT PRK+KVVSKRKFSDQSFFE+T R EVESLFGLFYRV
Subjt:  MSQFPKSDHQKELETPKSLEEGDRSKEEGGEEALPVAKDGDGESCRTPTSLRHRIPTARSCPTMPRKRKVVSKRKFSDQSFFEATGRGEVESLFGLFYRV

Query:  SSSKRRCTSV
        SS KRRCTS+
Subjt:  SSSKRRCTSV

KAG7019295.1 hypothetical protein SDJN02_18255, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-3377.48Show/hide
Query:  MSQFPKSDHQKELETPKSLEEGDRSKEE-GGEEALPVAKDGDGESCRTPTSLRHRIPTARSCPTMPRKRKVVSKRKFSDQSFFEATGRGEVESLFGLFYR
        MSQF KSDHQK  E PK  EEGDRSKEE GG EA+    D  GESCRTPTSLRHRIPTARS PT PRKRK+ SKRKFSDQSFFE TGRGEVESLF LFYR
Subjt:  MSQFPKSDHQKELETPKSLEEGDRSKEE-GGEEALPVAKDGDGESCRTPTSLRHRIPTARSCPTMPRKRKVVSKRKFSDQSFFEATGRGEVESLFGLFYR

Query:  VSSSKRRCTSV
        VSS+KRR T++
Subjt:  VSSSKRRCTSV

TrEMBL top hitse value%identityAlignment
A0A0A0LV74 Uncharacterized protein8.6e-2573.03Show/hide
Query:  MSQFPKSDHQKELETPKSLEEGDRSKEEGGEEALPVAKDGDGESCRTPTSLRHRIPTARSCPTMPRKRKVVSKRKFSDQSFFEATGRGE
        MSQF KSD QK LE P++ E GDRS EEG  EAL  A+  DGESCRTPTS +HRIP A+SCPT PRK++VV KRKFSDQSFFEATGRGE
Subjt:  MSQFPKSDHQKELETPKSLEEGDRSKEEGGEEALPVAKDGDGESCRTPTSLRHRIPTARSCPTMPRKRKVVSKRKFSDQSFFEATGRGE

A0A251NNT8 Uncharacterized protein1.7e-0944.86Show/hide
Query:  DHQKELETPKSLEEGDRSKEEGGEEALPVAKDGDGESCRTPTSLRHRIPTARSCPTMPRKR--KVVSKRKFSDQSFFEATGRGEVESLFGLFYRVSSS--
        DHQ   + P+ L+E D + E       P+ +  +G+ CRTPTS  H+IPT +SCPT PRK+    V KRK +   FFE TGR EVES F   +   S   
Subjt:  DHQKELETPKSLEEGDRSKEEGGEEALPVAKDGDGESCRTPTSLRHRIPTARSCPTMPRKR--KVVSKRKFSDQSFFEATGRGEVESLFGLFYRVSSS--

Query:  KRRCTSV
        K+RCTS+
Subjt:  KRRCTSV

A0A2H5Q221 Uncharacterized protein1.6e-1048.94Show/hide
Query:  RSKEEGGEEALPVAKDGDGESCRTPTSLRHRIPTARSCPTMPRKRKVVS--KRKFSDQSFFEATGRGEVESLF---GLFYRVSSS--KRRCTSV
        +++EE GEE    ++D   E C+TPTS  H+IP  +SCPT PRK+  VS  KRK  +  FFEATGR EVES F      +RV S   K+RC S+
Subjt:  RSKEEGGEEALPVAKDGDGESCRTPTSLRHRIPTARSCPTMPRKRKVVS--KRKFSDQSFFEATGRGEVESLF---GLFYRVSSS--KRRCTSV

A0A5D3BHE9 Cyclin-dependent protein kinase inhibitor SMR24.0e-3879.09Show/hide
Query:  MSQFPKSDHQKELETPKSLEEGDRSKEEGGEEALPVAKDGDGESCRTPTSLRHRIPTARSCPTMPRKRKVVSKRKFSDQSFFEATGRGEVESLFGLFYRV
        MSQ  KSD +K LETPK+LE GDRS EEG  EAL  A+D +GESCRTPTSLRHRIP A+SCPT PRK++V  KRK SDQSFFEATGRGEVESLFGLFYRV
Subjt:  MSQFPKSDHQKELETPKSLEEGDRSKEEGGEEALPVAKDGDGESCRTPTSLRHRIPTARSCPTMPRKRKVVSKRKFSDQSFFEATGRGEVESLFGLFYRV

Query:  SSSKRRCTSV
        SSSKRRCTSV
Subjt:  SSSKRRCTSV

V4RSW1 Uncharacterized protein1.6e-1048.94Show/hide
Query:  RSKEEGGEEALPVAKDGDGESCRTPTSLRHRIPTARSCPTMPRKRKVVS--KRKFSDQSFFEATGRGEVESLF---GLFYRVSSS--KRRCTSV
        +++EE GEE    ++D   E C+TPTS  H+IP  +SCPT PRK+  VS  KRK  +  FFEATGR EVES F      +RV S   K+RC S+
Subjt:  RSKEEGGEEALPVAKDGDGESCRTPTSLRHRIPTARSCPTMPRKRKVVS--KRKFSDQSFFEATGRGEVESLF---GLFYRVSSS--KRRCTSV

SwissProt top hitse value%identityAlignment
Q9SGE2 Cyclin-dependent protein kinase inhibitor SMR28.0e-0442.7Show/hide
Query:  LETPKSLEEGDRSKEEGGEEALPVAKDGDGESCRTPTSLRHRIPTARSCPTMPRKR----KVVSKRKFS-DQSFFEAT--GRGEVESLF
        LE  K++E+  RS+EE   +     K+   ES  TPTS  H+IP   +CP  PRKR     +  K + S D  FFEAT  G  EVE+LF
Subjt:  LETPKSLEEGDRSKEEGGEEALPVAKDGDGESCRTPTSLRHRIPTARSCPTMPRKR----KVVSKRKFS-DQSFFEAT--GRGEVESLF

Arabidopsis top hitse value%identityAlignment
AT1G08180.1 unknown protein5.7e-0542.7Show/hide
Query:  LETPKSLEEGDRSKEEGGEEALPVAKDGDGESCRTPTSLRHRIPTARSCPTMPRKR----KVVSKRKFS-DQSFFEAT--GRGEVESLF
        LE  K++E+  RS+EE   +     K+   ES  TPTS  H+IP   +CP  PRKR     +  K + S D  FFEAT  G  EVE+LF
Subjt:  LETPKSLEEGDRSKEEGGEEALPVAKDGDGESCRTPTSLRHRIPTARSCPTMPRKR----KVVSKRKFS-DQSFFEAT--GRGEVESLF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCAATTTCCCAAATCCGATCACCAAAAGGAATTAGAAACCCCAAAGTCATTGGAAGAAGGCGATCGGAGTAAGGAGGAAGGCGGCGAAGAAGCGCTTCCGGTGGC
GAAGGATGGTGATGGAGAGAGCTGTCGAACTCCGACATCTCTACGACATCGAATTCCGACTGCACGAAGCTGCCCGACGATGCCGAGAAAGCGGAAAGTTGTGAGTAAGA
GGAAATTTTCAGACCAAAGCTTCTTTGAGGCCACCGGAAGGGGAGAGGTAGAATCCTTGTTTGGCTTATTTTATAGGGTTTCTTCTTCTAAAAGAAGATGTACAAGTGTA
TAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTCAATTTCCCAAATCCGATCACCAAAAGGAATTAGAAACCCCAAAGTCATTGGAAGAAGGCGATCGGAGTAAGGAGGAAGGCGGCGAAGAAGCGCTTCCGGTGGC
GAAGGATGGTGATGGAGAGAGCTGTCGAACTCCGACATCTCTACGACATCGAATTCCGACTGCACGAAGCTGCCCGACGATGCCGAGAAAGCGGAAAGTTGTGAGTAAGA
GGAAATTTTCAGACCAAAGCTTCTTTGAGGCCACCGGAAGGGGAGAGGTAGAATCCTTGTTTGGCTTATTTTATAGGGTTTCTTCTTCTAAAAGAAGATGTACAAGTGTA
TAA
Protein sequenceShow/hide protein sequence
MSQFPKSDHQKELETPKSLEEGDRSKEEGGEEALPVAKDGDGESCRTPTSLRHRIPTARSCPTMPRKRKVVSKRKFSDQSFFEATGRGEVESLFGLFYRVSSSKRRCTSV