; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10018180 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10018180
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionLEA_2 domain-containing protein
Genome locationChr04:1354796..1356024
RNA-Seq ExpressionHG10018180
SyntenyHG10018180
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008462337.1 PREDICTED: NDR1/HIN1-like protein 12 [Cucumis melo]1.1e-6769.57Show/hide
Query:  MRSI-TTQGETSSSSSSKQSSYRQQQYGTTAKRTKLIRIIGRSLLCVIFLVGLAIVICWLVVFPKTPRLIVETGKVIAHTSSTHNMLNATIAFTFKSYNP
        MRSI TT+GE   +SSS++SS  Q +   T K+T++IRIIGR LL VIFLVGLA+VICWLVVFPK PR +VETGKVIAH +STHNMLNATIAFT K YNP
Subjt:  MRSI-TTQGETSSSSSSKQSSYRQQQYGTTAKRTKLIRIIGRSLLCVIFLVGLAIVICWLVVFPKTPRLIVETGKVIAHTSSTHNMLNATIAFTFKSYNP

Query:  NKRASIHMLSMKMIVTSMGQMFFSPIPTFTLTPGNQTVFSSATEVKFEYPFGYREEIDPELRFSADVSYSVERWMSKPRLLEIYCNHLLLKINGSTTFDN
        NKRASIH+ SM+MI+TSMGQ F S +P F  TPGNQTV S A +V F+YPFG+REEI+PEL FSA++SYSV  W S+PRLL+IYCN+LLL+IN + TF+N
Subjt:  NKRASIHMLSMKMIVTSMGQMFFSPIPTFTLTPGNQTVFSSATEVKFEYPFGYREEIDPELRFSADVSYSVERWMSKPRLLEIYCNHLLLKINGSTTFDN

Query:  TKCKVDL
        TKC VDL
Subjt:  TKCKVDL

XP_008462348.1 PREDICTED: protein YLS9-like [Cucumis melo]1.7e-6878.98Show/hide
Query:  KRTKLIRIIGRSLLCVIFLVGLAIVICWLVVFPKTPRLIVETGKVIAHTSSTHNMLNATIAFTFKSYNPNKRASIHMLSMKMIVTSMGQMFFSPIPTFTL
        KRT+LIR++GRSLL VIFLV L ++ICWLVV PKTPRLIVETGKV+ H SST +MLNATIAFT KSYNPNKRASIHM  M+MIV +MG  F S IP+FTL
Subjt:  KRTKLIRIIGRSLLCVIFLVGLAIVICWLVVFPKTPRLIVETGKVIAHTSSTHNMLNATIAFTFKSYNPNKRASIHMLSMKMIVTSMGQMFFSPIPTFTL

Query:  TPGNQTVFSSATEVKFEYPFGYREEIDPELRFSADVSYSVERWMSKPRLLEIYCNHLLLKINGSTTFDNTKCKVDL
        TP NQTV  SA +V FEYPFGY EEI+PEL+FSA+VSYSVE+WMSKPRLLEIYCNHLLLKIN STTFDNTKCKVDL
Subjt:  TPGNQTVFSSATEVKFEYPFGYREEIDPELRFSADVSYSVERWMSKPRLLEIYCNHLLLKINGSTTFDNTKCKVDL

XP_011648454.1 uncharacterized protein LOC105434469 [Cucumis sativus]4.9e-6870.53Show/hide
Query:  MRSITT-QGETSSSSSSKQSSYRQQQYGTTAKRTKLIRIIGRSLLCVIFLVGLAIVICWLVVFPKTPRLIVETGKVIAHTSSTHNMLNATIAFTFKSYNP
        MRS TT +GE   +SSSK+SS  Q +   T K+T++IRIIGRSLL VIFLVGLA+VICWLVVFPK PR+ VETG+VIAH +STHNMLNATI FT K YNP
Subjt:  MRSITT-QGETSSSSSSKQSSYRQQQYGTTAKRTKLIRIIGRSLLCVIFLVGLAIVICWLVVFPKTPRLIVETGKVIAHTSSTHNMLNATIAFTFKSYNP

Query:  NKRASIHMLSMKMIVTSMGQMFFSPIPTFTLTPGNQTVFSSATEVKFEYPFGYREEIDPELRFSADVSYSVERWMSKPRLLEIYCNHLLLKINGSTTFDN
        NKRAS+H+ SM+MIVTSMGQ F S IPTF  TPGNQTV S A EV F+YPFG++EEI+PEL FSA++SYSVE W S+PRLL IYCN+LLL+IN + TF+N
Subjt:  NKRASIHMLSMKMIVTSMGQMFFSPIPTFTLTPGNQTVFSSATEVKFEYPFGYREEIDPELRFSADVSYSVERWMSKPRLLEIYCNHLLLKINGSTTFDN

Query:  TKCKVDL
        TKC VDL
Subjt:  TKCKVDL

XP_011654134.1 NDR1/HIN1-like protein 10 isoform X2 [Cucumis sativus]1.4e-6777.71Show/hide
Query:  KRTKLIRIIGRSLLCVIFLVGLAIVICWLVVFPKTPRLIVETGKVIAHTSSTHNMLNATIAFTFKSYNPNKRASIHMLSMKMIVTSMGQMFFSPIPTFTL
        KRT+LIR++GRSLL VIFLV L ++ICWLVV PK+PRLIVETGKVIAH SST +MLNATIAFT KSYNPNKRASIHM  M+MIV +MG  F S IP+FTL
Subjt:  KRTKLIRIIGRSLLCVIFLVGLAIVICWLVVFPKTPRLIVETGKVIAHTSSTHNMLNATIAFTFKSYNPNKRASIHMLSMKMIVTSMGQMFFSPIPTFTL

Query:  TPGNQTVFSSATEVKFEYPFGYREEIDPELRFSADVSYSVERWMSKPRLLEIYCNHLLLKINGSTTFDNTKCKVD
        TP NQTV SSA +V FEYPFGY EEI+PEL+FSA+VSYS+++WMSKPRLLEIYCNH+LLKIN ST FDNTKCKVD
Subjt:  TPGNQTVFSSATEVKFEYPFGYREEIDPELRFSADVSYSVERWMSKPRLLEIYCNHLLLKINGSTTFDNTKCKVD

XP_038895359.1 NDR1/HIN1-like protein 10 [Benincasa hispida]2.8e-7980.1Show/hide
Query:  MRSITTQGETSSSSSSKQSSYRQQQYGTTAKRTKLIRIIGRSLLCVIFLVGLAIVICWLVVFPKTPRLIVETGKVIAHTSSTHNMLNATIAFTFKSYNPN
        MRS  TQGET SS SSKQSSYRQQ    TAKRT++IRIIGRSLL VIFLVGLAI+ICWLVV PKTPRLIVETG VI H SSTHNML ATI FTF+SYNPN
Subjt:  MRSITTQGETSSSSSSKQSSYRQQQYGTTAKRTKLIRIIGRSLLCVIFLVGLAIVICWLVVFPKTPRLIVETGKVIAHTSSTHNMLNATIAFTFKSYNPN

Query:  KRASIHMLSMKMIVTSMGQMFFSPIPTFTLTPGNQTVFSSATEVKFEYPFGYREEIDPELRFSADVSYSVERWMSKPRLLEIYCNHLLLKINGSTTFDNT
        KRA+IHM SM+MIV S+G+ F S IP+FTLTP NQTV SSA  V FEYPFG+ EEIDPELRFSA+VSYS+  WMSKPRLLEIYCNHLLLKIN STTFDNT
Subjt:  KRASIHMLSMKMIVTSMGQMFFSPIPTFTLTPGNQTVFSSATEVKFEYPFGYREEIDPELRFSADVSYSVERWMSKPRLLEIYCNHLLLKINGSTTFDNT

Query:  KCKVDL
        KCKVDL
Subjt:  KCKVDL

TrEMBL top hitse value%identityAlignment
A0A0A0LVK9 LEA_2 domain-containing protein2.4e-6870.53Show/hide
Query:  MRSITT-QGETSSSSSSKQSSYRQQQYGTTAKRTKLIRIIGRSLLCVIFLVGLAIVICWLVVFPKTPRLIVETGKVIAHTSSTHNMLNATIAFTFKSYNP
        MRS TT +GE   +SSSK+SS  Q +   T K+T++IRIIGRSLL VIFLVGLA+VICWLVVFPK PR+ VETG+VIAH +STHNMLNATI FT K YNP
Subjt:  MRSITT-QGETSSSSSSKQSSYRQQQYGTTAKRTKLIRIIGRSLLCVIFLVGLAIVICWLVVFPKTPRLIVETGKVIAHTSSTHNMLNATIAFTFKSYNP

Query:  NKRASIHMLSMKMIVTSMGQMFFSPIPTFTLTPGNQTVFSSATEVKFEYPFGYREEIDPELRFSADVSYSVERWMSKPRLLEIYCNHLLLKINGSTTFDN
        NKRAS+H+ SM+MIVTSMGQ F S IPTF  TPGNQTV S A EV F+YPFG++EEI+PEL FSA++SYSVE W S+PRLL IYCN+LLL+IN + TF+N
Subjt:  NKRASIHMLSMKMIVTSMGQMFFSPIPTFTLTPGNQTVFSSATEVKFEYPFGYREEIDPELRFSADVSYSVERWMSKPRLLEIYCNHLLLKINGSTTFDN

Query:  TKCKVDL
        TKC VDL
Subjt:  TKCKVDL

A0A0A0LY09 Uncharacterized protein6.9e-6877.71Show/hide
Query:  KRTKLIRIIGRSLLCVIFLVGLAIVICWLVVFPKTPRLIVETGKVIAHTSSTHNMLNATIAFTFKSYNPNKRASIHMLSMKMIVTSMGQMFFSPIPTFTL
        KRT+LIR++GRSLL VIFLV L ++ICWLVV PK+PRLIVETGKVIAH SST +MLNATIAFT KSYNPNKRASIHM  M+MIV +MG  F S IP+FTL
Subjt:  KRTKLIRIIGRSLLCVIFLVGLAIVICWLVVFPKTPRLIVETGKVIAHTSSTHNMLNATIAFTFKSYNPNKRASIHMLSMKMIVTSMGQMFFSPIPTFTL

Query:  TPGNQTVFSSATEVKFEYPFGYREEIDPELRFSADVSYSVERWMSKPRLLEIYCNHLLLKINGSTTFDNTKCKVD
        TP NQTV SSA +V FEYPFGY EEI+PEL+FSA+VSYS+++WMSKPRLLEIYCNH+LLKIN ST FDNTKCKVD
Subjt:  TPGNQTVFSSATEVKFEYPFGYREEIDPELRFSADVSYSVERWMSKPRLLEIYCNHLLLKINGSTTFDNTKCKVD

A0A1S3CGR5 NDR1/HIN1-like protein 125.3e-6869.57Show/hide
Query:  MRSI-TTQGETSSSSSSKQSSYRQQQYGTTAKRTKLIRIIGRSLLCVIFLVGLAIVICWLVVFPKTPRLIVETGKVIAHTSSTHNMLNATIAFTFKSYNP
        MRSI TT+GE   +SSS++SS  Q +   T K+T++IRIIGR LL VIFLVGLA+VICWLVVFPK PR +VETGKVIAH +STHNMLNATIAFT K YNP
Subjt:  MRSI-TTQGETSSSSSSKQSSYRQQQYGTTAKRTKLIRIIGRSLLCVIFLVGLAIVICWLVVFPKTPRLIVETGKVIAHTSSTHNMLNATIAFTFKSYNP

Query:  NKRASIHMLSMKMIVTSMGQMFFSPIPTFTLTPGNQTVFSSATEVKFEYPFGYREEIDPELRFSADVSYSVERWMSKPRLLEIYCNHLLLKINGSTTFDN
        NKRASIH+ SM+MI+TSMGQ F S +P F  TPGNQTV S A +V F+YPFG+REEI+PEL FSA++SYSV  W S+PRLL+IYCN+LLL+IN + TF+N
Subjt:  NKRASIHMLSMKMIVTSMGQMFFSPIPTFTLTPGNQTVFSSATEVKFEYPFGYREEIDPELRFSADVSYSVERWMSKPRLLEIYCNHLLLKINGSTTFDN

Query:  TKCKVDL
        TKC VDL
Subjt:  TKCKVDL

A0A1S3CGS4 protein YLS9-like8.1e-6978.98Show/hide
Query:  KRTKLIRIIGRSLLCVIFLVGLAIVICWLVVFPKTPRLIVETGKVIAHTSSTHNMLNATIAFTFKSYNPNKRASIHMLSMKMIVTSMGQMFFSPIPTFTL
        KRT+LIR++GRSLL VIFLV L ++ICWLVV PKTPRLIVETGKV+ H SST +MLNATIAFT KSYNPNKRASIHM  M+MIV +MG  F S IP+FTL
Subjt:  KRTKLIRIIGRSLLCVIFLVGLAIVICWLVVFPKTPRLIVETGKVIAHTSSTHNMLNATIAFTFKSYNPNKRASIHMLSMKMIVTSMGQMFFSPIPTFTL

Query:  TPGNQTVFSSATEVKFEYPFGYREEIDPELRFSADVSYSVERWMSKPRLLEIYCNHLLLKINGSTTFDNTKCKVDL
        TP NQTV  SA +V FEYPFGY EEI+PEL+FSA+VSYSVE+WMSKPRLLEIYCNHLLLKIN STTFDNTKCKVDL
Subjt:  TPGNQTVFSSATEVKFEYPFGYREEIDPELRFSADVSYSVERWMSKPRLLEIYCNHLLLKINGSTTFDNTKCKVDL

A0A5A7TF76 NDR1/HIN1-like protein 125.3e-6869.57Show/hide
Query:  MRSI-TTQGETSSSSSSKQSSYRQQQYGTTAKRTKLIRIIGRSLLCVIFLVGLAIVICWLVVFPKTPRLIVETGKVIAHTSSTHNMLNATIAFTFKSYNP
        MRSI TT+GE   +SSS++SS  Q +   T K+T++IRIIGR LL VIFLVGLA+VICWLVVFPK PR +VETGKVIAH +STHNMLNATIAFT K YNP
Subjt:  MRSI-TTQGETSSSSSSKQSSYRQQQYGTTAKRTKLIRIIGRSLLCVIFLVGLAIVICWLVVFPKTPRLIVETGKVIAHTSSTHNMLNATIAFTFKSYNP

Query:  NKRASIHMLSMKMIVTSMGQMFFSPIPTFTLTPGNQTVFSSATEVKFEYPFGYREEIDPELRFSADVSYSVERWMSKPRLLEIYCNHLLLKINGSTTFDN
        NKRASIH+ SM+MI+TSMGQ F S +P F  TPGNQTV S A +V F+YPFG+REEI+PEL FSA++SYSV  W S+PRLL+IYCN+LLL+IN + TF+N
Subjt:  NKRASIHMLSMKMIVTSMGQMFFSPIPTFTLTPGNQTVFSSATEVKFEYPFGYREEIDPELRFSADVSYSVERWMSKPRLLEIYCNHLLLKINGSTTFDN

Query:  TKCKVDL
        TKC VDL
Subjt:  TKCKVDL

SwissProt top hitse value%identityAlignment
Q8VZ13 Uncharacterized protein At1g081608.0e-0527.13Show/hide
Query:  LLCVI-------FLVGLAIVICWLVVFPKTPRLIVETGKVIAHT-SSTHNMLNATIAFTFKSYNPNKRASIHMLSMKMIVTSMGQ-MFFSPIPTFTLTPG
        +LC+I        LVGLAI+I +L + PK     VE   V      +  + +NA  ++  KSYNP K  S+   SM++      Q +    I  F   P 
Subjt:  LLCVI-------FLVGLAIVICWLVVFPKTPRLIVETGKVIAHT-SSTHNMLNATIAFTFKSYNPNKRASIHMLSMKMIVTSMGQ-MFFSPIPTFTLTPG

Query:  NQTVFS-------------SATEVKFEYPFGYREEIDPELRFSADVSYSVERWMSKPRLLEIYCNHLLLKINGSTT--FDNTKCKVDL
        N+T                +A +++ E   G    I+ E+  +A VSY    + S+ R L+  C  +++ +  S+   F    CK  L
Subjt:  NQTVFS-------------SATEVKFEYPFGYREEIDPELRFSADVSYSVERWMSKPRLLEIYCNHLLLKINGSTT--FDNTKCKVDL

Arabidopsis top hitse value%identityAlignment
AT1G08160.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family5.7e-0627.13Show/hide
Query:  LLCVI-------FLVGLAIVICWLVVFPKTPRLIVETGKVIAHT-SSTHNMLNATIAFTFKSYNPNKRASIHMLSMKMIVTSMGQ-MFFSPIPTFTLTPG
        +LC+I        LVGLAI+I +L + PK     VE   V      +  + +NA  ++  KSYNP K  S+   SM++      Q +    I  F   P 
Subjt:  LLCVI-------FLVGLAIVICWLVVFPKTPRLIVETGKVIAHT-SSTHNMLNATIAFTFKSYNPNKRASIHMLSMKMIVTSMGQ-MFFSPIPTFTLTPG

Query:  NQTVFS-------------SATEVKFEYPFGYREEIDPELRFSADVSYSVERWMSKPRLLEIYCNHLLLKINGSTT--FDNTKCKVDL
        N+T                +A +++ E   G    I+ E+  +A VSY    + S+ R L+  C  +++ +  S+   F    CK  L
Subjt:  NQTVFS-------------SATEVKFEYPFGYREEIDPELRFSADVSYSVERWMSKPRLLEIYCNHLLLKINGSTT--FDNTKCKVDL

AT3G11660.1 NDR1/HIN1-like 18.2e-0531.58Show/hide
Query:  RTKLIRIIGRSLLCVIFLVGLAIVICWLVVFPKTPRLIVETGKVIAHTSSTH--NMLNATIAFTFKSYNPNKRASIHMLSMKMIVTSMGQMFFSP
        R KLIR I  S++ V+F++ L I++ W ++ P  PR I++   V A   S +  N+L +    T  S NPN +  I+   + +  T   Q    P
Subjt:  RTKLIRIIGRSLLCVIFLVGLAIVICWLVVFPKTPRLIVETGKVIAHTSSTH--NMLNATIAFTFKSYNPNKRASIHMLSMKMIVTSMGQMFFSP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAAGCATTACTACACAAGGAGAAACATCATCATCATCATCATCAAAACAAAGCTCCTATAGGCAACAACAATATGGGACGACAGCAAAACGTACGAAACTCATAAG
AATCATAGGAAGAAGCTTGTTGTGTGTAATATTCCTTGTTGGTCTTGCAATTGTCATATGTTGGCTTGTTGTCTTCCCCAAAACCCCACGTCTCATTGTGGAAACTGGCA
AAGTCATAGCTCATACTTCAAGTACTCATAATATGCTCAATGCTACCATAGCTTTCACTTTCAAAAGCTACAACCCTAACAAAAGAGCCTCCATTCACATGCTTTCTATG
AAGATGATAGTCACTAGCATGGGCCAAATGTTTTTCTCCCCCATCCCTACCTTCACGCTAACGCCCGGAAACCAAACCGTCTTCTCCTCCGCCACTGAAGTCAAATTTGA
ATACCCGTTTGGGTATAGGGAAGAGATAGATCCAGAGCTTCGCTTTTCAGCTGATGTCAGTTATAGTGTCGAGAGATGGATGTCGAAACCTCGGTTGCTGGAGATCTATT
GTAATCACCTCTTGCTTAAGATCAATGGTTCTACAACTTTTGATAATACCAAATGCAAAGTGGATCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGAAGCATTACTACACAAGGAGAAACATCATCATCATCATCATCAAAACAAAGCTCCTATAGGCAACAACAATATGGGACGACAGCAAAACGTACGAAACTCATAAG
AATCATAGGAAGAAGCTTGTTGTGTGTAATATTCCTTGTTGGTCTTGCAATTGTCATATGTTGGCTTGTTGTCTTCCCCAAAACCCCACGTCTCATTGTGGAAACTGGCA
AAGTCATAGCTCATACTTCAAGTACTCATAATATGCTCAATGCTACCATAGCTTTCACTTTCAAAAGCTACAACCCTAACAAAAGAGCCTCCATTCACATGCTTTCTATG
AAGATGATAGTCACTAGCATGGGCCAAATGTTTTTCTCCCCCATCCCTACCTTCACGCTAACGCCCGGAAACCAAACCGTCTTCTCCTCCGCCACTGAAGTCAAATTTGA
ATACCCGTTTGGGTATAGGGAAGAGATAGATCCAGAGCTTCGCTTTTCAGCTGATGTCAGTTATAGTGTCGAGAGATGGATGTCGAAACCTCGGTTGCTGGAGATCTATT
GTAATCACCTCTTGCTTAAGATCAATGGTTCTACAACTTTTGATAATACCAAATGCAAAGTGGATCTTTGA
Protein sequenceShow/hide protein sequence
MRSITTQGETSSSSSSKQSSYRQQQYGTTAKRTKLIRIIGRSLLCVIFLVGLAIVICWLVVFPKTPRLIVETGKVIAHTSSTHNMLNATIAFTFKSYNPNKRASIHMLSM
KMIVTSMGQMFFSPIPTFTLTPGNQTVFSSATEVKFEYPFGYREEIDPELRFSADVSYSVERWMSKPRLLEIYCNHLLLKINGSTTFDNTKCKVDL