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HG10018332 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10018332
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionMental retardation GTPase activating protein
Genome locationChr04:3149810..3151170
RNA-Seq ExpressionHG10018332
SyntenyHG10018332
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004141499.1 uncharacterized protein LOC101213588 isoform X1 [Cucumis sativus]3.4e-2846.8Show/hide
Query:  MRSFREDGRSFRSNITISSTASSPG-YSMRDEIDPSTYSFTTALK-------------------------------------------------------
        +RSF EDGRSFRSN+TISSTASSPG YSMRDEIDPSTYSFTTALK                                                       
Subjt:  MRSFREDGRSFRSNITISSTASSPG-YSMRDEIDPSTYSFTTALK-------------------------------------------------------

Query:  -----------------------------------------EKRVEGMTTKDVGTQSTPPDRSSTSPSPASTPPINERSLKACGKEQTGSPNSYSIPKKK
                                                 EK++EGM TKDVGTQSTPPDRSSTSPSPASTPPI ERSLK CGKEQTGS  SYSIPKKK
Subjt:  -----------------------------------------EKRVEGMTTKDVGTQSTPPDRSSTSPSPASTPPINERSLKACGKEQTGSPNSYSIPKKK

Query:  PEK
         EK
Subjt:  PEK

XP_008459461.1 PREDICTED: uncharacterized protein LOC103498590 isoform X2 [Cucumis melo]2.3e-2947.29Show/hide
Query:  MRSFREDGRSFRSNITISSTASSPG-YSMRDEIDPSTYSFTTALK-------------------------------------------------------
        +RSFREDGRSFRSN+TISSTASSPG YSMRDEIDPSTYSFTTALK                                                       
Subjt:  MRSFREDGRSFRSNITISSTASSPG-YSMRDEIDPSTYSFTTALK-------------------------------------------------------

Query:  -----------------------------------------EKRVEGMTTKDVGTQSTPPDRSSTSPSPASTPPINERSLKACGKEQTGSPNSYSIPKKK
                                                 EK+++GM TKDVGTQSTPPDRSSTSPSPASTPPI ERSLK CGKEQTGS NSYSIPKKK
Subjt:  -----------------------------------------EKRVEGMTTKDVGTQSTPPDRSSTSPSPASTPPINERSLKACGKEQTGSPNSYSIPKKK

Query:  PEK
         EK
Subjt:  PEK

XP_022939095.1 uncharacterized protein LOC111445097 isoform X2 [Cucurbita moschata]4.4e-2849.24Show/hide
Query:  MRSFR-EDGRSFRSNITISSTASSPG-YSMRDEIDPSTYSFTTALK------------------------------------------------------
        +RSFR EDGRSFRSNITISSTASSPG YSMRDEIDPSTYSFTTALK                                                      
Subjt:  MRSFR-EDGRSFRSNITISSTASSPG-YSMRDEIDPSTYSFTTALK------------------------------------------------------

Query:  -----------------------------------EKRVEGMTTKDVGTQSTPPDRSSTSPSPASTPPINERSLKACGKEQTGSPNSYSIPKKKPEK
                                           EK+VEGM TKDVGTQSTPPDRSSTSPSPASTPPI ERSLK CGKE+TGS NSYSIP+KK EK
Subjt:  -----------------------------------EKRVEGMTTKDVGTQSTPPDRSSTSPSPASTPPINERSLKACGKEQTGSPNSYSIPKKKPEK

XP_031741937.1 uncharacterized protein LOC101213588 isoform X2 [Cucumis sativus]3.4e-2846.8Show/hide
Query:  MRSFREDGRSFRSNITISSTASSPG-YSMRDEIDPSTYSFTTALK-------------------------------------------------------
        +RSF EDGRSFRSN+TISSTASSPG YSMRDEIDPSTYSFTTALK                                                       
Subjt:  MRSFREDGRSFRSNITISSTASSPG-YSMRDEIDPSTYSFTTALK-------------------------------------------------------

Query:  -----------------------------------------EKRVEGMTTKDVGTQSTPPDRSSTSPSPASTPPINERSLKACGKEQTGSPNSYSIPKKK
                                                 EK++EGM TKDVGTQSTPPDRSSTSPSPASTPPI ERSLK CGKEQTGS  SYSIPKKK
Subjt:  -----------------------------------------EKRVEGMTTKDVGTQSTPPDRSSTSPSPASTPPINERSLKACGKEQTGSPNSYSIPKKK

Query:  PEK
         EK
Subjt:  PEK

XP_038889564.1 uncharacterized protein LOC120079450 [Benincasa hispida]2.3e-3250Show/hide
Query:  MRSFREDGRSFRSNITISSTASSPG-YSMRDEIDPSTYSFTTALK-------------------------------------------------------
        +RSFREDGRSFRSNITISSTASSPG YSMRDEIDPSTYSFTTALK                                                       
Subjt:  MRSFREDGRSFRSNITISSTASSPG-YSMRDEIDPSTYSFTTALK-------------------------------------------------------

Query:  -----------------------------------------EKRVEGMTTKDVGTQSTPPDRSSTSPSPASTPPINERSLKACGKEQTGSPNSYSIPKKK
                                                 EK+VEGMTTKDVGTQSTPPDRSSTSPSPAST PINERSLK CGKEQTGS NSYSIPKKK
Subjt:  -----------------------------------------EKRVEGMTTKDVGTQSTPPDRSSTSPSPASTPPINERSLKACGKEQTGSPNSYSIPKKK

Query:  PEKA
        PEKA
Subjt:  PEKA

TrEMBL top hitse value%identityAlignment
A0A0A0KSN4 Uncharacterized protein1.6e-2846.8Show/hide
Query:  MRSFREDGRSFRSNITISSTASSPG-YSMRDEIDPSTYSFTTALK-------------------------------------------------------
        +RSF EDGRSFRSN+TISSTASSPG YSMRDEIDPSTYSFTTALK                                                       
Subjt:  MRSFREDGRSFRSNITISSTASSPG-YSMRDEIDPSTYSFTTALK-------------------------------------------------------

Query:  -----------------------------------------EKRVEGMTTKDVGTQSTPPDRSSTSPSPASTPPINERSLKACGKEQTGSPNSYSIPKKK
                                                 EK++EGM TKDVGTQSTPPDRSSTSPSPASTPPI ERSLK CGKEQTGS  SYSIPKKK
Subjt:  -----------------------------------------EKRVEGMTTKDVGTQSTPPDRSSTSPSPASTPPINERSLKACGKEQTGSPNSYSIPKKK

Query:  PEK
         EK
Subjt:  PEK

A0A1S3CBG4 uncharacterized protein LOC103498590 isoform X21.1e-2947.29Show/hide
Query:  MRSFREDGRSFRSNITISSTASSPG-YSMRDEIDPSTYSFTTALK-------------------------------------------------------
        +RSFREDGRSFRSN+TISSTASSPG YSMRDEIDPSTYSFTTALK                                                       
Subjt:  MRSFREDGRSFRSNITISSTASSPG-YSMRDEIDPSTYSFTTALK-------------------------------------------------------

Query:  -----------------------------------------EKRVEGMTTKDVGTQSTPPDRSSTSPSPASTPPINERSLKACGKEQTGSPNSYSIPKKK
                                                 EK+++GM TKDVGTQSTPPDRSSTSPSPASTPPI ERSLK CGKEQTGS NSYSIPKKK
Subjt:  -----------------------------------------EKRVEGMTTKDVGTQSTPPDRSSTSPSPASTPPINERSLKACGKEQTGSPNSYSIPKKK

Query:  PEK
         EK
Subjt:  PEK

A0A6J1C127 uncharacterized protein LOC111006452 isoform X23.6e-2845.19Show/hide
Query:  MRSFREDGRSFRSNITISSTASSPGYSMRDEIDPSTYSFTTALK--------------------------------------------------------
        +RSFREDGRSFRSNITISSTASSPGYSMR+EIDPSTYSFT ALK                                                        
Subjt:  MRSFREDGRSFRSNITISSTASSPGYSMRDEIDPSTYSFTTALK--------------------------------------------------------

Query:  ----------------------------------------EKRVEGMTTKDVGTQSTPPDRSSTSPSPASTPPINERSLKACGKEQTGSPNSYSIPKKKP
                                                EK+VEGM TKDVGTQSTPPDRSS SPSPASTPPI ERSLKACGKE+T SPNS S PK K 
Subjt:  ----------------------------------------EKRVEGMTTKDVGTQSTPPDRSSTSPSPASTPPINERSLKACGKEQTGSPNSYSIPKKKP

Query:  EKAAIAYR
        E A +A +
Subjt:  EKAAIAYR

A0A6J1FG35 uncharacterized protein LOC111445097 isoform X13.6e-2848.74Show/hide
Query:  MRSFR-EDGRSFRSNITISSTASSPG-YSMRDEIDPSTYSFTTALK------------------------------------------------------
        +RSFR EDGRSFRSNITISSTASSPG YSMRDEIDPSTYSFTTALK                                                      
Subjt:  MRSFR-EDGRSFRSNITISSTASSPG-YSMRDEIDPSTYSFTTALK------------------------------------------------------

Query:  -------------------------------------EKRVEGMTTKDVGTQSTPPDRSSTSPSPASTPPINERSLKACGKEQTGSPNSYSIPKKKPEK
                                             EK+VEGM TKDVGTQSTPPDRSSTSPSPASTPPI ERSLK CGKE+TGS NSYSIP+KK EK
Subjt:  -------------------------------------EKRVEGMTTKDVGTQSTPPDRSSTSPSPASTPPINERSLKACGKEQTGSPNSYSIPKKKPEK

A0A6J1FLP3 uncharacterized protein LOC111445097 isoform X22.1e-2849.24Show/hide
Query:  MRSFR-EDGRSFRSNITISSTASSPG-YSMRDEIDPSTYSFTTALK------------------------------------------------------
        +RSFR EDGRSFRSNITISSTASSPG YSMRDEIDPSTYSFTTALK                                                      
Subjt:  MRSFR-EDGRSFRSNITISSTASSPG-YSMRDEIDPSTYSFTTALK------------------------------------------------------

Query:  -----------------------------------EKRVEGMTTKDVGTQSTPPDRSSTSPSPASTPPINERSLKACGKEQTGSPNSYSIPKKKPEK
                                           EK+VEGM TKDVGTQSTPPDRSSTSPSPASTPPI ERSLK CGKE+TGS NSYSIP+KK EK
Subjt:  -----------------------------------EKRVEGMTTKDVGTQSTPPDRSSTSPSPASTPPINERSLKACGKEQTGSPNSYSIPKKKPEK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G02500.1 unknown protein1.4e-1160Show/hide
Query:  MRSFREDGRSFRSNITISSTASSPGYSMRDEIDPSTYSFTTALKEKRVEGMTTKD
        +RSFRED +S  +N+TISSTASSPGYS++DEIDPS YSF++ALK  + + +  K+
Subjt:  MRSFREDGRSFRSNITISSTASSPGYSMRDEIDPSTYSFTTALKEKRVEGMTTKD

AT5G16030.1 unknown protein1.2e-0760.38Show/hide
Query:  SFREDGR--SFRSN--ITISSTASSPGYSMRDEIDPSTYSFTTALKEKRVEGM
        SFRED    SFR+     ISSTASSPGY++++EIDPSTYSFT ALK  + + M
Subjt:  SFREDGR--SFRSN--ITISSTASSPGYSMRDEIDPSTYSFTTALKEKRVEGM

AT5G16030.2 unknown protein2.1e-0767.39Show/hide
Query:  SFREDGR--SFRSN--ITISSTASSPGYSMRDEIDPSTYSFTTALK
        SFRED    SFR+     ISSTASSPGY++++EIDPSTYSFT ALK
Subjt:  SFREDGR--SFRSN--ITISSTASSPGYSMRDEIDPSTYSFTTALK

AT5G16030.2 unknown protein1.6e-0468.18Show/hide
Query:  ALKEKRVEGMTTKDVGTQSTPP-DRSSTSPSPASTPPINERSLK
        AL EK+V GM  +DVG QST   D SS SPSPA TPPI ERSLK
Subjt:  ALKEKRVEGMTTKDVGTQSTPP-DRSSTSPSPASTPPINERSLK

AT5G16030.3 unknown protein1.2e-0760.38Show/hide
Query:  SFREDGR--SFRSN--ITISSTASSPGYSMRDEIDPSTYSFTTALKEKRVEGM
        SFRED    SFR+     ISSTASSPGY++++EIDPSTYSFT ALK  + + M
Subjt:  SFREDGR--SFRSN--ITISSTASSPGYSMRDEIDPSTYSFTTALKEKRVEGM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGAAGCTTTAGGGAAGATGGCAGATCCTTTAGATCAAACATAACCATCTCCAGCACTGCTTCTTCCCCAGGCTACTCCATGAGAGATGAAATTGACCCATCAACCTA
TTCTTTCACTACTGCTCTCAAAGAAAAGAGAGTGGAAGGGATGACGACCAAGGATGTGGGAACTCAAAGCACACCACCTGACAGAAGTTCAACAAGTCCTAGCCCTGCTT
CGACACCTCCCATTAACGAGAGATCGTTAAAGGCATGTGGGAAAGAACAAACTGGTTCACCAAATTCTTATTCCATTCCTAAAAAGAAACCAGAGAAAGCGGCTATAGCT
TACAGACCTATGATTTTCTCCCATGGTTGTCTGCTTCCCAACAACTCATACAGTTGTGGTTGTCTCTGTTTGTGGGAAGCATTTTCCGGACAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCGAAGCTTTAGGGAAGATGGCAGATCCTTTAGATCAAACATAACCATCTCCAGCACTGCTTCTTCCCCAGGCTACTCCATGAGAGATGAAATTGACCCATCAACCTA
TTCTTTCACTACTGCTCTCAAAGAAAAGAGAGTGGAAGGGATGACGACCAAGGATGTGGGAACTCAAAGCACACCACCTGACAGAAGTTCAACAAGTCCTAGCCCTGCTT
CGACACCTCCCATTAACGAGAGATCGTTAAAGGCATGTGGGAAAGAACAAACTGGTTCACCAAATTCTTATTCCATTCCTAAAAAGAAACCAGAGAAAGCGGCTATAGCT
TACAGACCTATGATTTTCTCCCATGGTTGTCTGCTTCCCAACAACTCATACAGTTGTGGTTGTCTCTGTTTGTGGGAAGCATTTTCCGGACAGTAG
Protein sequenceShow/hide protein sequence
MRSFREDGRSFRSNITISSTASSPGYSMRDEIDPSTYSFTTALKEKRVEGMTTKDVGTQSTPPDRSSTSPSPASTPPINERSLKACGKEQTGSPNSYSIPKKKPEKAAIA
YRPMIFSHGCLLPNNSYSCGCLCLWEAFSGQ