CuGenDBv2

Gene ID	HG10018337
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	COX assembly mitochondrial protein
Genome location	Chr04:3222216..3224723
RNA-Seq Expression	HG10018337
Synteny	HG10018337
Gene Ontology terms	GO:0005739 - mitochondrion (cellular component)
InterPro domains	IPR013892 - Cytochrome c oxidase biogenesis protein Cmc1-like

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6578501.1 hypothetical protein SDJN03_22949, partial [Cucurbita argyrosperma subsp. sororia]

3.2e-40

93.26

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Query:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGKTLSVVFKCRNQAKELNNCLHLYTNDSMLEEMKRDYALQHDGKP
        MGYIQEARENHVKKKVEEALRSKMKQKA+KECDHYASKYAECAYG+TLSVVFKCRNQAKELNNCLH YTND++LEEMKR+YALQHDGKP
Subjt:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGKTLSVVFKCRNQAKELNNCLHLYTNDSMLEEMKRDYALQHDGKP

XP_008459466.1 PREDICTED: uncharacterized protein DDB_G0275933 [Cucumis melo]

4.9e-41

94.38

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Query:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGKTLSVVFKCRNQAKELNNCLHLYTNDSMLEEMKRDYALQHDGKP
        MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYG+TLSV+FKCRNQAKELNNCLHLYTNDS+L+EMKR+YALQHDGKP
Subjt:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGKTLSVVFKCRNQAKELNNCLHLYTNDSMLEEMKRDYALQHDGKP

XP_022993759.1 uncharacterized protein DDB_G0275933 [Cucurbita maxima]

3.2e-40

93.26

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Query:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGKTLSVVFKCRNQAKELNNCLHLYTNDSMLEEMKRDYALQHDGKP
        MGYIQEARENHVKKKVEEALRSKMKQKA+KECDHYASKYAECAYG+TLSVVFKCRNQAKELNNCLH YTND++LEEMKR+YALQHDGKP
Subjt:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGKTLSVVFKCRNQAKELNNCLHLYTNDSMLEEMKRDYALQHDGKP

XP_023549716.1 uncharacterized protein DDB_G0275933 [Cucurbita pepo subsp. pepo]

1.2e-39

92.13

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Query:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGKTLSVVFKCRNQAKELNNCLHLYTNDSMLEEMKRDYALQHDGKP
        MGYIQEARENHVKKKVEEALRSKMKQKA+KECDHYASKYAECAYG+TLSVVFKCR+QAKELNNCLH YTND++LEEMKR+YALQHDGKP
Subjt:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGKTLSVVFKCRNQAKELNNCLHLYTNDSMLEEMKRDYALQHDGKP

XP_038889684.1 uncharacterized protein DDB_G0275933 [Benincasa hispida]

7.1e-40

93.26

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Query:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGKTLSVVFKCRNQAKELNNCLHLYTNDSMLEEMKRDYALQHDGKP
        MGYIQEARENHVKKKVEEALRSKMKQKALKECDH+ASKYAECAYG+TLSVVFKCR QAKELNNCLHLYTN+S+LEEMKR+YALQHDGKP
Subjt:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGKTLSVVFKCRNQAKELNNCLHLYTNDSMLEEMKRDYALQHDGKP

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KVX6 COX assembly mitochondrial protein

6.4e-39

92.13

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Query:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGKTLSVVFKCRNQAKELNNCLHLYTNDSMLEEMKRDYALQHDGKP
        MGYIQEARENHVKKKVEEALRSKMKQKALKECD YASKYAECAYG+TLSVVFKCRNQAKELNNCLH YTNDS+L+EMKR+YALQ DGKP
Subjt:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGKTLSVVFKCRNQAKELNNCLHLYTNDSMLEEMKRDYALQHDGKP

A0A1S3CA82 COX assembly mitochondrial protein

2.4e-41

94.38

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Query:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGKTLSVVFKCRNQAKELNNCLHLYTNDSMLEEMKRDYALQHDGKP
        MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYG+TLSV+FKCRNQAKELNNCLHLYTNDS+L+EMKR+YALQHDGKP
Subjt:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGKTLSVVFKCRNQAKELNNCLHLYTNDSMLEEMKRDYALQHDGKP

A0A6J1BW91 COX assembly mitochondrial protein

2.1e-37

89.77

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Query:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGKTLSVVFKCRNQAKELNNCLHLYTNDSMLEEMKRDYALQHDGK
        MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYAS+YAECAYG+TLSVV+KCR+QAKELN+CLH YTND++LEEMKRDYALQ DGK
Subjt:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGKTLSVVFKCRNQAKELNNCLHLYTNDSMLEEMKRDYALQHDGK

A0A6J1FIP8 COX assembly mitochondrial protein

9.9e-40

92.13

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Query:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGKTLSVVFKCRNQAKELNNCLHLYTNDSMLEEMKRDYALQHDGKP
        MGYIQEARENHVKKKVEEALRSKMKQKA+KECDHYASKYAECAYG+TLSVVFKCRNQAKELNNCLH YTND++LEEMKR+YA QHDGKP
Subjt:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGKTLSVVFKCRNQAKELNNCLHLYTNDSMLEEMKRDYALQHDGKP

A0A6J1K100 COX assembly mitochondrial protein

1.5e-40

93.26

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Query:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGKTLSVVFKCRNQAKELNNCLHLYTNDSMLEEMKRDYALQHDGKP
        MGYIQEARENHVKKKVEEALRSKMKQKA+KECDHYASKYAECAYG+TLSVVFKCRNQAKELNNCLH YTND++LEEMKR+YALQHDGKP
Subjt:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGKTLSVVFKCRNQAKELNNCLHLYTNDSMLEEMKRDYALQHDGKP

SwissProt top hits

e value

%identity

Alignment

Q552P9 Uncharacterized protein DDB_G0275933

3.7e-07

39.39

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Query:  VEEALRSKMKQKALKECDHYASKYAECAYGKTLSVVFKCRNQAKELNNCLHLYTNDSMLEEMKRDY
        V+  LR K+K ++LKEC  + + +A+C+  K +SVV++CR   + + NCL  YT    L  MKR++
Subjt:  VEEALRSKMKQKALKECDHYASKYAECAYGKTLSVVFKCRNQAKELNNCLHLYTNDSMLEEMKRDY

Arabidopsis top hits

e value

%identity

Alignment

AT5G16060.1 Cytochrome c oxidase biogenesis protein Cmc1-like

1.4e-30

70.93

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Query:  YIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGKTLSVVFKCRNQAKELNNCLHLYTNDSMLEEMKRDYALQHDGK
        Y+++ARENHVKKKVEEALRSKMK KAL ECD Y SKYA+CA G+T SVV+ CR QA+ELN CLH +TND++LEEMKR Y +Q +GK
Subjt:  YIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGKTLSVVFKCRNQAKELNNCLHLYTNDSMLEEMKRDYALQHDGK

Sequences

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CDS sequence

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ATGGGTTACATACAGGAAGCTCGGGAGAATCATGTGAAGAAGAAAGTAGAGGAAGCTTTGCGCAGCAAAATGAAGCAGAAGGCGTTGAAGGAGTGCGATCATTACGCTTC
AAAATATGCTGAATGCGCCTATGGCAAAACATTATCTGTCGTTTTCAAGTGTCGCAATCAAGCTAAGGAATTGAACAATTGCCTTCACCTATACACTAACGACTCCATGT
TGGAAGAGATGAAGCGGGATTATGCACTTCAACACGATGGCAAGCCGTGA

mRNA sequence

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Protein sequence

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MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGKTLSVVFKCRNQAKELNNCLHLYTNDSMLEEMKRDYALQHDGKP

HG10018337 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome