; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10018344 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10018344
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr04:3295301..3297267
RNA-Seq ExpressionHG10018344
SyntenyHG10018344
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057401.1 hypothetical protein E6C27_scaffold280G002750 [Cucumis melo var. makuwa]3.4e-0834.39Show/hide
Query:  NAGSSSQTLDTSSSIPYSKDYEN--PSSSQASFQQVSKKHSRLLKPLSKYFIRKRASFLNSWSALVNSDLLEECCVKIQIPGLFSDRLATSPPKSRSFLY
        +  SSS+    S+ +P      +      +    +V K++  L KP  K F RKR SF NSW+ + N DLLEE CVK+Q+PG+  ++   S        +
Subjt:  NAGSSSQTLDTSSSIPYSKDYEN--PSSSQASFQQVSKKHSRLLKPLSKYFIRKRASFLNSWSALVNSDLLEECCVKIQIPGLFSDRLATSPPKSRSFLY

Query:  SDFKIPGSNVHFVRGTPSLPSSNSRSSKHDSDGDSVASASSEDLESLEIEENQEEED
        S       +V  VRGT  +P         DS+ +SV S SSEDLE  E +E +  E+
Subjt:  SDFKIPGSNVHFVRGTPSLPSSNSRSSKHDSDGDSVASASSEDLESLEIEENQEEED

KAA0062445.1 putative mitochondrial protein [Cucumis melo var. makuwa]7.9e-0540.43Show/hide
Query:  RKRASFLNSWSALVNSDLLEECCVKIQIPGLFSDRLATSPPKSRSFLYSDFKIPGS-NVHFVRGTPSLPSSNSRSSKHDSDGDSVASASSEDLE
        +KR SF NSW+   N DLLE CCVKIQ+PGL  +  A+ P  ++   +S      S N   V+G      + S     D + +S+AS SSE+LE
Subjt:  RKRASFLNSWSALVNSDLLEECCVKIQIPGLFSDRLATSPPKSRSFLYSDFKIPGS-NVHFVRGTPSLPSSNSRSSKHDSDGDSVASASSEDLE

KAE8653520.1 hypothetical protein Csa_007552, partial [Cucumis sativus]1.1e-1140.59Show/hide
Query:  DVAFSPSAERTIAINLNDKDSGSSINALTDNVDISRLSPAIVNAGSSSQTLDTSSSIPYSKDYENPSSSQASFQQVSKKHSRLLKPLSKYFIRKRASFLN
        DVA SPSAER  AI L DKDS S IN LT N   S LS    N  +    L + + IP SKD EN SS+QASFQ  SKK S LLK   K+FIRK+     
Subjt:  DVAFSPSAERTIAINLNDKDSGSSINALTDNVDISRLSPAIVNAGSSSQTLDTSSSIPYSKDYENPSSSQASFQQVSKKHSRLLKPLSKYFIRKRASFLN

Query:  SWSALVNSDLLEECCVKIQIPGLFSDRLATSPPKSRSFLYSDFKIPGSNVHFVRGTPSLPSSNSRSSKHDSDGDSVASASSEDLESLEIEENQEEEDTLD
                D+L +  V                                       T S+PSS S  SKHDSD DS+ASAS E+LES E   N E +  + 
Subjt:  SWSALVNSDLLEECCVKIQIPGLFSDRLATSPPKSRSFLYSDFKIPGSNVHFVRGTPSLPSSNSRSSKHDSDGDSVASASSEDLESLEIEENQEEEDTLD

Query:  VI
        +I
Subjt:  VI

XP_038876689.1 uncharacterized protein LOC120069082 isoform X1 [Benincasa hispida]1.2e-0534.11Show/hide
Query:  KHSRLLKPLSKYFIRKRASFLNSWSALVNSDLLEECCVKIQIPGLFSDRLATSPPKSRSFLYSDFKIPGSNVH----FVRGTPSLPSSNSRSSKHDSDGD
        + S LLKP  KYF R+++S + +WS L NS+LLE+CC ++QIP   ++R    P    +F  S     G N+     +V+G+P +    S+    + D  
Subjt:  KHSRLLKPLSKYFIRKRASFLNSWSALVNSDLLEECCVKIQIPGLFSDRLATSPPKSRSFLYSDFKIPGSNVH----FVRGTPSLPSSNSRSSKHDSDGD

Query:  SVASASSEDLE----SLEIEENQEEEDTL
        S+AS SSEDL+    +L+ +  ++++D +
Subjt:  SVASASSEDLE----SLEIEENQEEEDTL

XP_038887514.1 RNA-binding protein 39-like isoform X1 [Benincasa hispida]1.5e-1170.59Show/hide
Query:  SKKHSRLLKPLSKYFIRKRASFLNSWSALVNSDLLEECCVKIQIPGLFSDR
        SKKHSRLLKP  ++FIRK+ SF NSW+ L NSDLLEECCVK+QIP  F +R
Subjt:  SKKHSRLLKPLSKYFIRKRASFLNSWSALVNSDLLEECCVKIQIPGLFSDR

TrEMBL top hitse value%identityAlignment
A0A0A0KHK4 Uncharacterized protein3.1e-0734.29Show/hide
Query:  LTDNVDISRLSPAIVNAGSSSQTLDTSSSIPYSKDYENPSSSQASFQQVSKKHSRLLKPLSKYFIRKRASFLNSWSALVNSDLLEECCVKIQIPGLFSDR
        +T  VDIS   PA+++                   +++   ++ +  +VS++ S L K   K+F RK+ SF NSW+ + N D+LE  CVKIQ+PGL  +R
Subjt:  LTDNVDISRLSPAIVNAGSSSQTLDTSSSIPYSKDYENPSSSQASFQQVSKKHSRLLKPLSKYFIRKRASFLNSWSALVNSDLLEECCVKIQIPGLFSDR

Query:  LATSP
         A+ P
Subjt:  LATSP

A0A5A7UV76 Uncharacterized protein1.7e-0834.39Show/hide
Query:  NAGSSSQTLDTSSSIPYSKDYEN--PSSSQASFQQVSKKHSRLLKPLSKYFIRKRASFLNSWSALVNSDLLEECCVKIQIPGLFSDRLATSPPKSRSFLY
        +  SSS+    S+ +P      +      +    +V K++  L KP  K F RKR SF NSW+ + N DLLEE CVK+Q+PG+  ++   S        +
Subjt:  NAGSSSQTLDTSSSIPYSKDYEN--PSSSQASFQQVSKKHSRLLKPLSKYFIRKRASFLNSWSALVNSDLLEECCVKIQIPGLFSDRLATSPPKSRSFLY

Query:  SDFKIPGSNVHFVRGTPSLPSSNSRSSKHDSDGDSVASASSEDLESLEIEENQEEED
        S       +V  VRGT  +P         DS+ +SV S SSEDLE  E +E +  E+
Subjt:  SDFKIPGSNVHFVRGTPSLPSSNSRSSKHDSDGDSVASASSEDLESLEIEENQEEED

A0A5A7V992 Putative mitochondrial protein3.8e-0540.43Show/hide
Query:  RKRASFLNSWSALVNSDLLEECCVKIQIPGLFSDRLATSPPKSRSFLYSDFKIPGS-NVHFVRGTPSLPSSNSRSSKHDSDGDSVASASSEDLE
        +KR SF NSW+   N DLLE CCVKIQ+PGL  +  A+ P  ++   +S      S N   V+G      + S     D + +S+AS SSE+LE
Subjt:  RKRASFLNSWSALVNSDLLEECCVKIQIPGLFSDRLATSPPKSRSFLYSDFKIPGS-NVHFVRGTPSLPSSNSRSSKHDSDGDSVASASSEDLE

A0A5D3DVC2 Putative mitochondrial protein6.5e-0540.86Show/hide
Query:  KRASFLNSWSALVNSDLLEECCVKIQIPGLFSDRLATSPPKSRSFLYSDFKIPGS-NVHFVRGTPSLPSSNSRSSKHDSDGDSVASASSEDLE
        KR SF NSW+   N DLLE CCVKIQ+PGL  +  A+ P  ++   +S      S N   V+G      + S     D + +S+AS SSE+LE
Subjt:  KRASFLNSWSALVNSDLLEECCVKIQIPGLFSDRLATSPPKSRSFLYSDFKIPGS-NVHFVRGTPSLPSSNSRSSKHDSDGDSVASASSEDLE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATATGGATTACCCACCTTCAAATTCACATTAGGTCTGCAGACTGCAGTTTTCGGTTTTGAGAGGCCAACCCATGATGGTTCTAAAGATGTCTTTTTTGCAATTGA
TCATTATTGGCAAATGCAAAGGTTGACCAAAGCTTGCTTCACCCCATTGAGCCCTAAGCATGGAAGTGAAAAGTTGCAAGATGTTGCTTTTTCTCCTTCTGCTGAAAGAA
CTATTGCTATAAATTTGAATGATAAAGACTCTGGTTCTTCCATTAATGCTTTGACAGATAATGTTGATATCTCCCGTCTCTCTCCAGCAATTGTAAATGCTGGAAGTTCT
AGTCAGACTTTGGATACCTCCTCTTCGATCCCCTACTCCAAAGATTATGAAAACCCATCCTCTAGTCAAGCTTCTTTTCAGCAGGTTTCCAAGAAGCATTCTCGCCTACT
GAAACCGCTCTCTAAATACTTTATTAGGAAAAGGGCGTCCTTCCTCAACTCTTGGTCAGCTTTAGTCAACTCAGATTTGCTTGAAGAATGTTGTGTTAAGATTCAAATCC
CTGGCCTTTTCTCCGACCGGCTAGCTACATCTCCACCCAAGTCTCGCTCCTTTCTTTATTCAGATTTTAAGATTCCAGGCTCAAACGTACATTTTGTGAGAGGTACCCCG
AGCTTGCCGTCAAGTAACTCACGTTCCAGCAAGCATGACTCTGATGGAGATTCAGTTGCAAGCGCTAGTAGTGAAGATTTAGAGAGCTTAGAAATAGAGGAAAATCAAGA
AGAAGAAGACACATTGGATGTTATTAGCTTTTTCAAACAGAGGAAGATCATTTGTATAAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGATATGGATTACCCACCTTCAAATTCACATTAGGTCTGCAGACTGCAGTTTTCGGTTTTGAGAGGCCAACCCATGATGGTTCTAAAGATGTCTTTTTTGCAATTGA
TCATTATTGGCAAATGCAAAGGTTGACCAAAGCTTGCTTCACCCCATTGAGCCCTAAGCATGGAAGTGAAAAGTTGCAAGATGTTGCTTTTTCTCCTTCTGCTGAAAGAA
CTATTGCTATAAATTTGAATGATAAAGACTCTGGTTCTTCCATTAATGCTTTGACAGATAATGTTGATATCTCCCGTCTCTCTCCAGCAATTGTAAATGCTGGAAGTTCT
AGTCAGACTTTGGATACCTCCTCTTCGATCCCCTACTCCAAAGATTATGAAAACCCATCCTCTAGTCAAGCTTCTTTTCAGCAGGTTTCCAAGAAGCATTCTCGCCTACT
GAAACCGCTCTCTAAATACTTTATTAGGAAAAGGGCGTCCTTCCTCAACTCTTGGTCAGCTTTAGTCAACTCAGATTTGCTTGAAGAATGTTGTGTTAAGATTCAAATCC
CTGGCCTTTTCTCCGACCGGCTAGCTACATCTCCACCCAAGTCTCGCTCCTTTCTTTATTCAGATTTTAAGATTCCAGGCTCAAACGTACATTTTGTGAGAGGTACCCCG
AGCTTGCCGTCAAGTAACTCACGTTCCAGCAAGCATGACTCTGATGGAGATTCAGTTGCAAGCGCTAGTAGTGAAGATTTAGAGAGCTTAGAAATAGAGGAAAATCAAGA
AGAAGAAGACACATTGGATGTTATTAGCTTTTTCAAACAGAGGAAGATCATTTGTATAAAATAA
Protein sequenceShow/hide protein sequence
MGYGLPTFKFTLGLQTAVFGFERPTHDGSKDVFFAIDHYWQMQRLTKACFTPLSPKHGSEKLQDVAFSPSAERTIAINLNDKDSGSSINALTDNVDISRLSPAIVNAGSS
SQTLDTSSSIPYSKDYENPSSSQASFQQVSKKHSRLLKPLSKYFIRKRASFLNSWSALVNSDLLEECCVKIQIPGLFSDRLATSPPKSRSFLYSDFKIPGSNVHFVRGTP
SLPSSNSRSSKHDSDGDSVASASSEDLESLEIEENQEEEDTLDVISFFKQRKIICIK