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HG10018358 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10018358
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr04:3450992..3451339
RNA-Seq ExpressionHG10018358
SyntenyHG10018358
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB1311697.1 unnamed protein product [Coregonus sp. 'balchen']5.6e-0538.98Show/hide
Query:  SRSLSPPWLSLTFTTMALAHFH----HHG--SRSLSPPWLSLTFTTMALAHFHHHG------SRSLSPPWLSLTFTTMALAHFHHHCSRPPLLSLTLLSP
        S++L+  WLS T     LA FH    ++G  S SL+ PWLS T     LA FH         S+ L+ PWLS T     LA FH   + P  LSL+L  P
Subjt:  SRSLSPPWLSLTFTTMALAHFH----HHG--SRSLSPPWLSLTFTTMALAHFHHHG------SRSLSPPWLSLTFTTMALAHFHHHCSRPPLLSLTLLSP

Query:  TIAVTF---ALALSHSRS
         ++ T     LAL H  S
Subjt:  TIAVTF---ALALSHSRS
GFR60643.1 hypothetical protein ElyMa_005412600 [Elysia marginata]8.6e-0642.25Show/hide
Query:  HHHGSRSLSPPWLSLTFTTMALAHFHHHGSRSLSPPWLSLTFTTMALAHFHHHGSRSLSPP-----WLSLT
        HHH     + PWL   + TMA    HHHG R  + PWL   + TMA    HHHG    S P     WLS T
Subjt:  HHHGSRSLSPPWLSLTFTTMALAHFHHHGSRSLSPPWLSLTFTTMALAHFHHHGSRSLSPP-----WLSLT
GIL79166.1 hypothetical protein Vretifemale_8542, partial [Volvox reticuliferus]2.4e-0840.2Show/hide
Query:  HFHHHGSRSLSPPWLSLTFTTMALAHFHHHGSRSLSPPWLSLTF-TTMALAHFHHHGSRSLSPPWLSLTFTTMALAHFHHHCSRPPLLSLTLLSPTIAVT
        H HHH S S  PP  S+  TT    H HHH    L PP +  T  TT    H HHH   S SPP + +  TT    H HH  S PP  S+ + + T    
Subjt:  HFHHHGSRSLSPPWLSLTFTTMALAHFHHHGSRSLSPPWLSLTF-TTMALAHFHHHGSRSLSPPWLSLTFTTMALAHFHHHCSRPPLLSLTLLSPTIAVT

Query:  FA
        FA
Subjt:  FA
GIL79168.1 hypothetical protein Vretifemale_8542, partial [Volvox reticuliferus]2.4e-0840.2Show/hide
Query:  HFHHHGSRSLSPPWLSLTFTTMALAHFHHHGSRSLSPPWLSLTF-TTMALAHFHHHGSRSLSPPWLSLTFTTMALAHFHHHCSRPPLLSLTLLSPTIAVT
        H HHH S S  PP  S+  TT    H HHH    L PP +  T  TT    H HHH   S SPP + +  TT    H HH  S PP  S+ + + T    
Subjt:  HFHHHGSRSLSPPWLSLTFTTMALAHFHHHGSRSLSPPWLSLTF-TTMALAHFHHHGSRSLSPPWLSLTFTTMALAHFHHHCSRPPLLSLTLLSPTIAVT

Query:  FA
        FA
Subjt:  FA
GIL79169.1 hypothetical protein Vretifemale_8542, partial [Volvox reticuliferus]2.4e-0840.2Show/hide
Query:  HFHHHGSRSLSPPWLSLTFTTMALAHFHHHGSRSLSPPWLSLTF-TTMALAHFHHHGSRSLSPPWLSLTFTTMALAHFHHHCSRPPLLSLTLLSPTIAVT
        H HHH S S  PP  S+  TT    H HHH    L PP +  T  TT    H HHH   S SPP + +  TT    H HH  S PP  S+ + + T    
Subjt:  HFHHHGSRSLSPPWLSLTFTTMALAHFHHHGSRSLSPPWLSLTF-TTMALAHFHHHGSRSLSPPWLSLTFTTMALAHFHHHCSRPPLLSLTLLSPTIAVT

Query:  FA
        FA
Subjt:  FA
TrEMBL top hitse value%identityAlignment
A0A3R7QB40 Uncharacterized protein3.0e-0436.9Show/hide
Query:  MALAHFHHHGSRSLSPPWLSLTFTTMALAHFHHHGSRSLSPPWLSLTFTTMALAHFHHHGSRSLSPPWLSLTFTTMALAHFHHH
        + ++ F HH    LSPP  S +F+T+ ++ F HH    L P   S +F+T+ ++ F HH    LSPP  S +F+T+ ++ F HH
Subjt:  MALAHFHHHGSRSLSPPWLSLTFTTMALAHFHHHGSRSLSPPWLSLTFTTMALAHFHHHGSRSLSPPWLSLTFTTMALAHFHHH
A0A6F8ZL86 Uncharacterized protein2.7e-0538.98Show/hide
Query:  SRSLSPPWLSLTFTTMALAHFH----HHG--SRSLSPPWLSLTFTTMALAHFHHHG------SRSLSPPWLSLTFTTMALAHFHHHCSRPPLLSLTLLSP
        S++L+  WLS T     LA FH    ++G  S SL+ PWLS T     LA FH         S+ L+ PWLS T     LA FH   + P  LSL+L  P
Subjt:  SRSLSPPWLSLTFTTMALAHFH----HHG--SRSLSPPWLSLTFTTMALAHFHHHG------SRSLSPPWLSLTFTTMALAHFHHHCSRPPLLSLTLLSP

Query:  TIAVTF---ALALSHSRS
         ++ T     LAL H  S
Subjt:  TIAVTF---ALALSHSRS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCTCGCTCACTTTCACCACCATGGCTCTCGCTCACTTTCACCACCATGGCTCTCGCTCACTTTCACCACCATGGCTCTCGCTCACTTTCACCACCATGGCTCTCG
CTCACTTTCACCACCATGGCTCTCGCTCACTTTCACCACCATGGCTCTCGCTCACTTTCACCACCATGGCTCTCGCTCACTTTCACCACCATGGCTCTCGCTCACTTTCA
CCACCATGGCTCTCGCTCACTTTCACCACCATTGCTCTCGCCCACCATTGCTCTCGCTCACTCTGCTCTCGCCCACCATTGCTGTCACTTTTGCTCTCGCTCTTTCTCAC
TCTCGCTCACCGGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCTCGCTCACTTTCACCACCATGGCTCTCGCTCACTTTCACCACCATGGCTCTCGCTCACTTTCACCACCATGGCTCTCGCTCACTTTCACCACCATGGCTCTCG
CTCACTTTCACCACCATGGCTCTCGCTCACTTTCACCACCATGGCTCTCGCTCACTTTCACCACCATGGCTCTCGCTCACTTTCACCACCATGGCTCTCGCTCACTTTCA
CCACCATGGCTCTCGCTCACTTTCACCACCATTGCTCTCGCCCACCATTGCTCTCGCTCACTCTGCTCTCGCCCACCATTGCTGTCACTTTTGCTCTCGCTCTTTCTCAC
TCTCGCTCACCGGAGTGA
Protein sequenceShow/hide protein sequence
MALAHFHHHGSRSLSPPWLSLTFTTMALAHFHHHGSRSLSPPWLSLTFTTMALAHFHHHGSRSLSPPWLSLTFTTMALAHFHHHCSRPPLLSLTLLSPTIAVTFALALSH
SRSPE