; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10018372 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10018372
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionzf-RVT domain-containing protein
Genome locationChr04:3561448..3562017
RNA-Seq ExpressionHG10018372
SyntenyHG10018372
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AAK39575.1 putative reverse transcriptase [Oryza sativa Japonica Group]9.1e-2936.51Show/hide
Query:  WRNILWGCELFVRGYCWQVGNGLSIRIEENPWLPRPGSGL-VNLSDSCRGELVASLLINSGEWDVGNVGDDFVEEGATLILSIWVNGLRRDDEIYWVLDK
        WR+I +G +L  +G  W+VGNG SIRI  +PWLPR  S   +    +CR + V+ L+   G WDV  +   F    A +IL+I ++    +D I W  DK
Subjt:  WRNILWGCELFVRGYCWQVGNGLSIRIEENPWLPRPGSGL-VNLSDSCRGELVASLLINSGEWDVGNVGDDFVEEGATLILSIWVNGLRRDDEIYWVLDK

Query:  KGAFSVKSAYKLGLYLASLGEGSSSSSEATVVVWNCLWNSSLPMKVKLCCWRVFLGILPSRENLVGKGLDLDSRCPLCEGKPETSVHLL
         G FSV+SAY+L   L ++ E SSS +      W  +W   +P KVK+  WRV    L +  N   + L+    C +C+ + E   H L
Subjt:  KGAFSVKSAYKLGLYLASLGEGSSSSSEATVVVWNCLWNSSLPMKVKLCCWRVFLGILPSRENLVGKGLDLDSRCPLCEGKPETSVHLL

CAH66131.1 OSIGBa0135L04.5 [Oryza sativa]1.4e-2940.21Show/hide
Query:  WRNILWGCELFVRGYCWQVGNGLSIRIEENPWLPRPGSGL-VNLSDSCRGELVASLLINSGEWDVGNVGDDFVEEGATLILSIWVNGLRRDDEIYWVLDK
        WR I +G EL  +G  W+VGNG SIRI  +PWLPR  S   + +  +CR + VA L+   G WD   V   F    A LIL+I ++    +D + W  DK
Subjt:  WRNILWGCELFVRGYCWQVGNGLSIRIEENPWLPRPGSGL-VNLSDSCRGELVASLLINSGEWDVGNVGDDFVEEGATLILSIWVNGLRRDDEIYWVLDK

Query:  KGAFSVKSAYKLGLYLASLGEGSSSSSEATVVVWNCLWNSSLPMKVKLCCWRVFLGILPSRENLVGKGLDLDSRCPLCEGKPETSVHLL
         G FSV+SAYKL L LA++  GS SS   T   WN +W  ++P KVK+  WR     L + EN   + L+    C +C  + E   H L
Subjt:  KGAFSVKSAYKLGLYLASLGEGSSSSSEATVVVWNCLWNSSLPMKVKLCCWRVFLGILPSRENLVGKGLDLDSRCPLCEGKPETSVHLL

EEC72938.1 hypothetical protein OsI_06800 [Oryza sativa Indica Group]3.3e-3138.1Show/hide
Query:  WRNILWGCELFVRGYCWQVGNGLSIRIEENPWLPRPGSGL-VNLSDSCRGELVASLLINSGEWDVGNVGDDFVEEGATLILSIWVNGLRRDDEIYWVLDK
        WR I +G EL  +G  W++GNG S+R+  +PW+PR  S   ++   +CR   V+ L+  S  WD   +   F+   A  IL+I ++    DD I W  D+
Subjt:  WRNILWGCELFVRGYCWQVGNGLSIRIEENPWLPRPGSGL-VNLSDSCRGELVASLLINSGEWDVGNVGDDFVEEGATLILSIWVNGLRRDDEIYWVLDK

Query:  KGAFSVKSAYKLGLYLASLGEGSSSSSEATVVVWNCLWNSSLPMKVKLCCWRVFLGILPSRENLVGKGLDLDSRCPLCEGKPETSVHLL
         G FSV+SAY L + LA + EGSSSS       WN LW  + P KVK+  WR     LP+ EN   + L++   C +C  + E  VH L
Subjt:  KGAFSVKSAYKLGLYLASLGEGSSSSSEATVVVWNCLWNSSLPMKVKLCCWRVFLGILPSRENLVGKGLDLDSRCPLCEGKPETSVHLL

EEC84030.1 hypothetical protein OsI_30257 [Oryza sativa Indica Group]2.4e-2935.98Show/hide
Query:  WRNILWGCELFVRGYCWQVGNGLSIRIEENPWLPRPGSGL-VNLSDSCRGELVASLLINSGEWDVGNVGDDFVEEGATLILSIWVNGLRRDDEIYWVLDK
        WR I +G EL  +G  W +GNG S+++  +PW+PR  S   ++   +CR   V+ L+  SG WD   +   F+      IL+I ++    +D I W  D+
Subjt:  WRNILWGCELFVRGYCWQVGNGLSIRIEENPWLPRPGSGL-VNLSDSCRGELVASLLINSGEWDVGNVGDDFVEEGATLILSIWVNGLRRDDEIYWVLDK

Query:  KGAFSVKSAYKLGLYLASLGEGSSSSSEATVVVWNCLWNSSLPMKVKLCCWRVFLGILPSRENLVGKGLDLDSRCPLCEGKPETSVHLL
         G FSV+SAY L + LA + +GSSSS   +   WN LW  + P KVK+  WR     L + EN   + L++   C +C  + E  VH L
Subjt:  KGAFSVKSAYKLGLYLASLGEGSSSSSEATVVVWNCLWNSSLPMKVKLCCWRVFLGILPSRENLVGKGLDLDSRCPLCEGKPETSVHLL

XP_025877173.1 uncharacterized protein LOC107278050 isoform X1 [Oryza sativa Japonica Group]5.3e-2938.1Show/hide
Query:  WRNILWGCELFVRGYCWQVGNGLSIRIEENPWLPRPGSGL-VNLSDSCRGELVASLLINSGEWDVGNVGDDFVEEGATLILSIWVNGLRRDDEIYWVLDK
        WR I++G EL  +G  W+VGNG SIR+  +PW+PR  S   V +  +CR + V+ L+   G WDV  +   F+     LILSI ++  + +D + W LDK
Subjt:  WRNILWGCELFVRGYCWQVGNGLSIRIEENPWLPRPGSGL-VNLSDSCRGELVASLLINSGEWDVGNVGDDFVEEGATLILSIWVNGLRRDDEIYWVLDK

Query:  KGAFSVKSAYKLGLYLASLGEGSSSSSEATVVVWNCLWNSSLPMKVKLCCWRVFLGILPSRENLVGKGLDLDSRCPLCEGKPETSVHLL
         G FSV+SAY L   LA+    SSSS+  +   W+ +W   LP K+K+  W+V    L + +N   + L     C +C  + E SVH L
Subjt:  KGAFSVKSAYKLGLYLASLGEGSSSSSEATVVVWNCLWNSSLPMKVKLCCWRVFLGILPSRENLVGKGLDLDSRCPLCEGKPETSVHLL

TrEMBL top hitse value%identityAlignment
A0A5S6RD43 Putative reverse transcriptase4.4e-2936.51Show/hide
Query:  WRNILWGCELFVRGYCWQVGNGLSIRIEENPWLPRPGSGL-VNLSDSCRGELVASLLINSGEWDVGNVGDDFVEEGATLILSIWVNGLRRDDEIYWVLDK
        WR+I +G +L  +G  W+VGNG SIRI  +PWLPR  S   +    +CR + V+ L+   G WDV  +   F    A +IL+I ++    +D I W  DK
Subjt:  WRNILWGCELFVRGYCWQVGNGLSIRIEENPWLPRPGSGL-VNLSDSCRGELVASLLINSGEWDVGNVGDDFVEEGATLILSIWVNGLRRDDEIYWVLDK

Query:  KGAFSVKSAYKLGLYLASLGEGSSSSSEATVVVWNCLWNSSLPMKVKLCCWRVFLGILPSRENLVGKGLDLDSRCPLCEGKPETSVHLL
         G FSV+SAY+L   L ++ E SSS +      W  +W   +P KVK+  WRV    L +  N   + L+    C +C+ + E   H L
Subjt:  KGAFSVKSAYKLGLYLASLGEGSSSSSEATVVVWNCLWNSSLPMKVKLCCWRVFLGILPSRENLVGKGLDLDSRCPLCEGKPETSVHLL

B8AFP4 Reverse transcriptase domain-containing protein1.6e-3138.1Show/hide
Query:  WRNILWGCELFVRGYCWQVGNGLSIRIEENPWLPRPGSGL-VNLSDSCRGELVASLLINSGEWDVGNVGDDFVEEGATLILSIWVNGLRRDDEIYWVLDK
        WR I +G EL  +G  W++GNG S+R+  +PW+PR  S   ++   +CR   V+ L+  S  WD   +   F+   A  IL+I ++    DD I W  D+
Subjt:  WRNILWGCELFVRGYCWQVGNGLSIRIEENPWLPRPGSGL-VNLSDSCRGELVASLLINSGEWDVGNVGDDFVEEGATLILSIWVNGLRRDDEIYWVLDK

Query:  KGAFSVKSAYKLGLYLASLGEGSSSSSEATVVVWNCLWNSSLPMKVKLCCWRVFLGILPSRENLVGKGLDLDSRCPLCEGKPETSVHLL
         G FSV+SAY L + LA + EGSSSS       WN LW  + P KVK+  WR     LP+ EN   + L++   C +C  + E  VH L
Subjt:  KGAFSVKSAYKLGLYLASLGEGSSSSSEATVVVWNCLWNSSLPMKVKLCCWRVFLGILPSRENLVGKGLDLDSRCPLCEGKPETSVHLL

B8B9K5 zf-RVT domain-containing protein1.2e-2935.98Show/hide
Query:  WRNILWGCELFVRGYCWQVGNGLSIRIEENPWLPRPGSGL-VNLSDSCRGELVASLLINSGEWDVGNVGDDFVEEGATLILSIWVNGLRRDDEIYWVLDK
        WR I +G EL  +G  W +GNG S+++  +PW+PR  S   ++   +CR   V+ L+  SG WD   +   F+      IL+I ++    +D I W  D+
Subjt:  WRNILWGCELFVRGYCWQVGNGLSIRIEENPWLPRPGSGL-VNLSDSCRGELVASLLINSGEWDVGNVGDDFVEEGATLILSIWVNGLRRDDEIYWVLDK

Query:  KGAFSVKSAYKLGLYLASLGEGSSSSSEATVVVWNCLWNSSLPMKVKLCCWRVFLGILPSRENLVGKGLDLDSRCPLCEGKPETSVHLL
         G FSV+SAY L + LA + +GSSSS   +   WN LW  + P KVK+  WR     L + EN   + L++   C +C  + E  VH L
Subjt:  KGAFSVKSAYKLGLYLASLGEGSSSSSEATVVVWNCLWNSSLPMKVKLCCWRVFLGILPSRENLVGKGLDLDSRCPLCEGKPETSVHLL

Q01M84 OSIGBa0135L04.5 protein6.8e-3040.21Show/hide
Query:  WRNILWGCELFVRGYCWQVGNGLSIRIEENPWLPRPGSGL-VNLSDSCRGELVASLLINSGEWDVGNVGDDFVEEGATLILSIWVNGLRRDDEIYWVLDK
        WR I +G EL  +G  W+VGNG SIRI  +PWLPR  S   + +  +CR + VA L+   G WD   V   F    A LIL+I ++    +D + W  DK
Subjt:  WRNILWGCELFVRGYCWQVGNGLSIRIEENPWLPRPGSGL-VNLSDSCRGELVASLLINSGEWDVGNVGDDFVEEGATLILSIWVNGLRRDDEIYWVLDK

Query:  KGAFSVKSAYKLGLYLASLGEGSSSSSEATVVVWNCLWNSSLPMKVKLCCWRVFLGILPSRENLVGKGLDLDSRCPLCEGKPETSVHLL
         G FSV+SAYKL L LA++  GS SS   T   WN +W  ++P KVK+  WR     L + EN   + L+    C +C  + E   H L
Subjt:  KGAFSVKSAYKLGLYLASLGEGSSSSSEATVVVWNCLWNSSLPMKVKLCCWRVFLGILPSRENLVGKGLDLDSRCPLCEGKPETSVHLL

Q94HY0 Retrotransposon protein, putative, unclassified4.4e-2936.51Show/hide
Query:  WRNILWGCELFVRGYCWQVGNGLSIRIEENPWLPRPGSGL-VNLSDSCRGELVASLLINSGEWDVGNVGDDFVEEGATLILSIWVNGLRRDDEIYWVLDK
        WR+I +G +L  +G  W+VGNG SIRI  +PWLPR  S   +    +CR + V+ L+   G WDV  +   F    A +IL+I ++    +D I W  DK
Subjt:  WRNILWGCELFVRGYCWQVGNGLSIRIEENPWLPRPGSGL-VNLSDSCRGELVASLLINSGEWDVGNVGDDFVEEGATLILSIWVNGLRRDDEIYWVLDK

Query:  KGAFSVKSAYKLGLYLASLGEGSSSSSEATVVVWNCLWNSSLPMKVKLCCWRVFLGILPSRENLVGKGLDLDSRCPLCEGKPETSVHLL
         G FSV+SAY+L   L ++ E SSS +      W  +W   +P KVK+  WRV    L +  N   + L+    C +C+ + E   H L
Subjt:  KGAFSVKSAYKLGLYLASLGEGSSSSSEATVVVWNCLWNSSLPMKVKLCCWRVFLGILPSRENLVGKGLDLDSRCPLCEGKPETSVHLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGCGAAATATCTTGTGGGGTTGTGAGTTATTTGTTAGGGGGTATTGTTGGCAGGTCGGGAATGGCTTGTCCATTAGAATTGAGGAGAATCCTTGGCTCCCTAGGCC
TGGGAGTGGTTTGGTGAACCTGAGTGACAGTTGTAGGGGTGAGTTGGTTGCTTCTCTATTGATTAATAGTGGGGAGTGGGACGTTGGTAACGTTGGTGATGATTTTGTTG
AGGAGGGGGCTACACTGATACTTTCTATCTGGGTGAATGGACTTCGGAGAGATGACGAGATCTATTGGGTGTTGGATAAAAAGGGGGCTTTCTCCGTGAAAAGTGCATAT
AAGCTCGGTTTATATCTTGCCTCTCTCGGGGAGGGTTCATCATCCTCATCAGAGGCGACTGTGGTGGTATGGAATTGTCTTTGGAATAGTTCCTTACCAATGAAGGTTAA
GCTTTGTTGTTGGCGAGTGTTCTTAGGTATTCTTCCTTCTCGGGAAAATCTTGTGGGCAAGGGATTGGACCTTGACTCGCGGTGCCCTTTGTGTGAAGGAAAGCCTGAGA
CATCGGTACATCTTTTATAG
mRNA sequenceShow/hide mRNA sequence
ATGTGGCGAAATATCTTGTGGGGTTGTGAGTTATTTGTTAGGGGGTATTGTTGGCAGGTCGGGAATGGCTTGTCCATTAGAATTGAGGAGAATCCTTGGCTCCCTAGGCC
TGGGAGTGGTTTGGTGAACCTGAGTGACAGTTGTAGGGGTGAGTTGGTTGCTTCTCTATTGATTAATAGTGGGGAGTGGGACGTTGGTAACGTTGGTGATGATTTTGTTG
AGGAGGGGGCTACACTGATACTTTCTATCTGGGTGAATGGACTTCGGAGAGATGACGAGATCTATTGGGTGTTGGATAAAAAGGGGGCTTTCTCCGTGAAAAGTGCATAT
AAGCTCGGTTTATATCTTGCCTCTCTCGGGGAGGGTTCATCATCCTCATCAGAGGCGACTGTGGTGGTATGGAATTGTCTTTGGAATAGTTCCTTACCAATGAAGGTTAA
GCTTTGTTGTTGGCGAGTGTTCTTAGGTATTCTTCCTTCTCGGGAAAATCTTGTGGGCAAGGGATTGGACCTTGACTCGCGGTGCCCTTTGTGTGAAGGAAAGCCTGAGA
CATCGGTACATCTTTTATAG
Protein sequenceShow/hide protein sequence
MWRNILWGCELFVRGYCWQVGNGLSIRIEENPWLPRPGSGLVNLSDSCRGELVASLLINSGEWDVGNVGDDFVEEGATLILSIWVNGLRRDDEIYWVLDKKGAFSVKSAY
KLGLYLASLGEGSSSSSEATVVVWNCLWNSSLPMKVKLCCWRVFLGILPSRENLVGKGLDLDSRCPLCEGKPETSVHLL