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HG10018392 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10018392
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionHeavy metal transport/detoxification superfamily protein
Genome locationChr04:3705162..3711238
RNA-Seq ExpressionHG10018392
SyntenyHG10018392
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR006121 - Heavy metal-associated domain, HMA
IPR036163 - Heavy metal-associated domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052042.1 superoxide dismutase 1 copper chaperone [Cucumis melo var. makuwa]3.8e-2685.14Show/hide
Query:  LMVVELKVFLHCEECIKKILKAIKKIQDIETYNVDIQLNKVTVTGNVTQEEVIKVLQKIRKTAIPWQADEANNI
        + VVELKVFLHC+ECIKKILKAIKKIQDIETYNVD+++NKV VTGNVT EEVIKVLQKIRKTA+PWQ DE NNI
Subjt:  LMVVELKVFLHCEECIKKILKAIKKIQDIETYNVDIQLNKVTVTGNVTQEEVIKVLQKIRKTAIPWQADEANNI

KAE8646572.1 hypothetical protein Csa_004951, partial [Cucumis sativus]5.3e-2890.54Show/hide
Query:  VVELKVFLHCEECIKKILKAIKKIQDIETYNVDIQLNKVTVTGNVTQEEVIKVLQKIRKTAIPWQADEANNINY
        VVELKVFLHCEECIKKILKAIKKIQDIETYNVD+++NKV VTGNVT EEVIKVLQKIRKTAIPWQ DE NNINY
Subjt:  VVELKVFLHCEECIKKILKAIKKIQDIETYNVDIQLNKVTVTGNVTQEEVIKVLQKIRKTAIPWQADEANNINY

XP_004138408.1 protein SODIUM POTASSIUM ROOT DEFECTIVE 2 [Cucumis sativus]5.3e-2890.54Show/hide
Query:  VVELKVFLHCEECIKKILKAIKKIQDIETYNVDIQLNKVTVTGNVTQEEVIKVLQKIRKTAIPWQADEANNINY
        VVELKVFLHCEECIKKILKAIKKIQDIETYNVD+++NKV VTGNVT EEVIKVLQKIRKTAIPWQ DE NNINY
Subjt:  VVELKVFLHCEECIKKILKAIKKIQDIETYNVDIQLNKVTVTGNVTQEEVIKVLQKIRKTAIPWQADEANNINY

XP_008456748.1 PREDICTED: superoxide dismutase 1 copper chaperone [Cucumis melo]4.9e-2687.5Show/hide
Query:  VVELKVFLHCEECIKKILKAIKKIQDIETYNVDIQLNKVTVTGNVTQEEVIKVLQKIRKTAIPWQADEANNI
        VVELKVFLHC+ECIKKILKAIKKIQDIETYNVD+++NKV VTGNVT EEVIKVLQKIRKTA+PWQ DE NNI
Subjt:  VVELKVFLHCEECIKKILKAIKKIQDIETYNVDIQLNKVTVTGNVTQEEVIKVLQKIRKTAIPWQADEANNI

XP_038884077.1 copper transport protein ATX1 [Benincasa hispida]1.7e-2689.04Show/hide
Query:  VVELKVFLHCEECIKKILKAIKKIQDIETYNVDIQLNKVTVTGNVTQEEVIKVLQKIRKTAIPWQADEANNIN
        VVELKVFLHCEECIKKILKAIKKIQDIETYNVD+++NKV VTGNVT+EEVIKVLQKIRKTAIPWQAD  NNI+
Subjt:  VVELKVFLHCEECIKKILKAIKKIQDIETYNVDIQLNKVTVTGNVTQEEVIKVLQKIRKTAIPWQADEANNIN

TrEMBL top hitse value%identityAlignment
A0A0A0K8N1 HMA domain-containing protein2.6e-2890.54Show/hide
Query:  VVELKVFLHCEECIKKILKAIKKIQDIETYNVDIQLNKVTVTGNVTQEEVIKVLQKIRKTAIPWQADEANNINY
        VVELKVFLHCEECIKKILKAIKKIQDIETYNVD+++NKV VTGNVT EEVIKVLQKIRKTAIPWQ DE NNINY
Subjt:  VVELKVFLHCEECIKKILKAIKKIQDIETYNVDIQLNKVTVTGNVTQEEVIKVLQKIRKTAIPWQADEANNINY

A0A1S3C423 superoxide dismutase 1 copper chaperone2.4e-2687.5Show/hide
Query:  VVELKVFLHCEECIKKILKAIKKIQDIETYNVDIQLNKVTVTGNVTQEEVIKVLQKIRKTAIPWQADEANNI
        VVELKVFLHC+ECIKKILKAIKKIQDIETYNVD+++NKV VTGNVT EEVIKVLQKIRKTA+PWQ DE NNI
Subjt:  VVELKVFLHCEECIKKILKAIKKIQDIETYNVDIQLNKVTVTGNVTQEEVIKVLQKIRKTAIPWQADEANNI

A0A2P2IHW8 HMA domain-containing protein3.0e-2182.86Show/hide
Query:  VVELKVFLHCEECIKKILKAIKKIQDIETYNVDIQLNKVTVTGNVTQEEVIKVLQKIRKTAIPWQADEAN
        VVELKV LHCEECIKKILKAIKKIQDIETY+VD QL+KVTVTGNVT EEVI+V+QKI KTA  W ADE N
Subjt:  VVELKVFLHCEECIKKILKAIKKIQDIETYNVDIQLNKVTVTGNVTQEEVIKVLQKIRKTAIPWQADEAN

A0A5D3C2A2 Superoxide dismutase 1 copper chaperone1.8e-2685.14Show/hide
Query:  LMVVELKVFLHCEECIKKILKAIKKIQDIETYNVDIQLNKVTVTGNVTQEEVIKVLQKIRKTAIPWQADEANNI
        + VVELKVFLHC+ECIKKILKAIKKIQDIETYNVD+++NKV VTGNVT EEVIKVLQKIRKTA+PWQ DE NNI
Subjt:  LMVVELKVFLHCEECIKKILKAIKKIQDIETYNVDIQLNKVTVTGNVTQEEVIKVLQKIRKTAIPWQADEANNI

A0A6J1BV52 copper transport protein ATX12.6e-2590.14Show/hide
Query:  VVELKVFLHCEECIKKILKAIKKIQDIETYNVDIQLNKVTVTGNVTQEEVIKVLQKIRKTAIPWQADEANN
        VVELKV LHCE+CIKKILKAIKKIQDIETYNVD QLNKVTVTGNVT EEVIKVL KI KTAIPWQADE NN
Subjt:  VVELKVFLHCEECIKKILKAIKKIQDIETYNVDIQLNKVTVTGNVTQEEVIKVLQKIRKTAIPWQADEANN

SwissProt top hitse value%identityAlignment
B3H6D0 Heavy metal-associated isoprenylated plant protein 458.2e-0842.42Show/hide
Query:  LMVVELKVFLHCEECIKKILKAIKKIQDIETYNVDIQLNKVTVTGNVTQEEVIKVLQKIRKTAIPW
        L +VEL V + C+ C KK+ +AI K+  ++T  +D+   KVTVTG V +EEV+K++++  +TA  W
Subjt:  LMVVELKVFLHCEECIKKILKAIKKIQDIETYNVDIQLNKVTVTGNVTQEEVIKVLQKIRKTAIPW

F4JZL7 Heavy metal-associated isoprenylated plant protein 331.6e-0641.43Show/hide
Query:  LKVFLHCEECIKKILKAIKKIQDIETYNVDIQLNKVTVTGNVTQEEVIKVLQKIRKTAIPWQADEANNIN
        LKV +HC+ C +K+ K ++KI+ + T  +D +L KVTV+GNV    +IK L K  K A  W A +  + N
Subjt:  LKVFLHCEECIKKILKAIKKIQDIETYNVDIQLNKVTVTGNVTQEEVIKVLQKIRKTAIPWQADEANNIN

Q58FZ0 Protein SODIUM POTASSIUM ROOT DEFECTIVE 29.1e-0737.84Show/hide
Query:  LVEKKSIFGPCEHNLMVVELKVFLHCEECIKKILKAIKKIQDIETYNVDIQLNKVTVTGNVTQEEVIKVLQKIR
        L EKK+  G  +    VV LKV LHC  C  K+ K + ++Q + ++N+D    KVTVTG++T  E++  + K++
Subjt:  LVEKKSIFGPCEHNLMVVELKVFLHCEECIKKILKAIKKIQDIETYNVDIQLNKVTVTGNVTQEEVIKVLQKIR

Q84J88 Heavy metal-associated isoprenylated plant protein 362.2e-0844.29Show/hide
Query:  LKVFLHCEECIKKILKAIKKIQDIETYNVDIQLNKVTVTGNVTQEEVIKVLQKIRKTAIPWQADEANNIN
        L+V +HCE C +KI K + KI  + T N+D++  KVTV GNV  E +IK + K  + A  W     NNIN
Subjt:  LKVFLHCEECIKKILKAIKKIQDIETYNVDIQLNKVTVTGNVTQEEVIKVLQKIRKTAIPWQADEANNIN

Q9M8K5 Heavy metal-associated isoprenylated plant protein 323.5e-0641.18Show/hide
Query:  LKVFLHCEECIKKILKAIKKIQDIETYNVDIQLNKVTVTGNVTQEEVIKVLQKIRKTAIPWQADEANN
        LKV +HC+ C +K+ K ++KI+ + T  +D +  KVTV+G+V    +IK L K  K A  W A + NN
Subjt:  LKVFLHCEECIKKILKAIKKIQDIETYNVDIQLNKVTVTGNVTQEEVIKVLQKIRKTAIPWQADEANN

Arabidopsis top hitse value%identityAlignment
AT2G37390.1 Chloroplast-targeted copper chaperone protein6.5e-0837.84Show/hide
Query:  LVEKKSIFGPCEHNLMVVELKVFLHCEECIKKILKAIKKIQDIETYNVDIQLNKVTVTGNVTQEEVIKVLQKIR
        L EKK+  G  +    VV LKV LHC  C  K+ K + ++Q + ++N+D    KVTVTG++T  E++  + K++
Subjt:  LVEKKSIFGPCEHNLMVVELKVFLHCEECIKKILKAIKKIQDIETYNVDIQLNKVTVTGNVTQEEVIKVLQKIR

AT2G37390.2 Chloroplast-targeted copper chaperone protein1.1e-0737.84Show/hide
Query:  LVEKKSIFGPCEHNLMVVELKVFLHCEECIKKILKAIKKIQDIETYNVDIQLNKVTVTGNVTQEEVIKVLQKIR
        L EKK+  G  +    VV LKV LHC  C  K+ K + ++Q + ++N+D    KVTVTG++T  E++  + K++
Subjt:  LVEKKSIFGPCEHNLMVVELKVFLHCEECIKKILKAIKKIQDIETYNVDIQLNKVTVTGNVTQEEVIKVLQKIR

AT3G56891.1 Heavy metal transport/detoxification superfamily protein5.9e-0942.42Show/hide
Query:  LMVVELKVFLHCEECIKKILKAIKKIQDIETYNVDIQLNKVTVTGNVTQEEVIKVLQKIRKTAIPW
        L +VEL V + C+ C KK+ +AI K+  ++T  +D+   KVTVTG V +EEV+K++++  +TA  W
Subjt:  LMVVELKVFLHCEECIKKILKAIKKIQDIETYNVDIQLNKVTVTGNVTQEEVIKVLQKIRKTAIPW

AT5G05365.1 Heavy metal transport/detoxification superfamily protein3.2e-2376.12Show/hide
Query:  VVELKVFLHCEECIKKILKAIKKIQDIETYNVDIQLNKVTVTGNVTQEEVIKVLQKIRKTAIPWQAD
        VVELKV LHC+ECI+KILKAIKKI+DIE Y+VD QLNKVTVTGNVT+E+VI+VLQK+RK A+ W  D
Subjt:  VVELKVFLHCEECIKKILKAIKKIQDIETYNVDIQLNKVTVTGNVTQEEVIKVLQKIRKTAIPWQAD

AT5G27690.1 Heavy metal transport/detoxification superfamily protein1.5e-0944.29Show/hide
Query:  LKVFLHCEECIKKILKAIKKIQDIETYNVDIQLNKVTVTGNVTQEEVIKVLQKIRKTAIPWQADEANNIN
        L+V +HCE C +KI K + KI  + T N+D++  KVTV GNV  E +IK + K  + A  W     NNIN
Subjt:  LKVFLHCEECIKKILKAIKKIQDIETYNVDIQLNKVTVTGNVTQEEVIKVLQKIRKTAIPWQADEANNIN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTAAAAGCAAAGAATTATTCTTTTTGGTAGAGAAGAAGAGTATTTTTGGGCCATGTGAACATAATTTAATGGTGGTGGAATTGAAGGTCTTTTTGCATTGTGAGGA
GTGCATCAAGAAGATTCTCAAAGCCATCAAGAAAATCCAAGATATAGAGACATATAATGTAGATATACAGCTGAACAAGGTGACTGTTACAGGCAATGTCACTCAAGAAG
AAGTCATCAAAGTTCTTCAGAAAATTAGGAAAACTGCAATTCCATGGCAAGCTGATGAAGCCAACAACATTAATTACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTAAAAGCAAAGAATTATTCTTTTTGGTAGAGAAGAAGAGTATTTTTGGGCCATGTGAACATAATTTAATGGTGGTGGAATTGAAGGTCTTTTTGCATTGTGAGGA
GTGCATCAAGAAGATTCTCAAAGCCATCAAGAAAATCCAAGATATAGAGACATATAATGTAGATATACAGCTGAACAAGGTGACTGTTACAGGCAATGTCACTCAAGAAG
AAGTCATCAAAGTTCTTCAGAAAATTAGGAAAACTGCAATTCCATGGCAAGCTGATGAAGCCAACAACATTAATTACTAG
Protein sequenceShow/hide protein sequence
MVKSKELFFLVEKKSIFGPCEHNLMVVELKVFLHCEECIKKILKAIKKIQDIETYNVDIQLNKVTVTGNVTQEEVIKVLQKIRKTAIPWQADEANNINY