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HG10018460 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10018460
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionCytoplasmic tRNA 2-thiolation protein 1
Genome locationChr04:4376601..4376840
RNA-Seq ExpressionHG10018460
SyntenyHG10018460
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4347851.1 hypothetical protein G4B88_030584 [Cannabis sativa]4.1e-2365.06Show/hide
Query:  GGSFFQMPLHYPRYSKKDYENMPEWKLDHLLVEYGLPTRGDLPYKRQFAMGAFLWPDF-----------HYSFKDPSLINKKV
        G S+FQMPLHYPRY+KKDY++MPEWKLD LL EYGLPT GDL YKR FA+GAFLWP F           ++SF D SL++KKV
Subjt:  GGSFFQMPLHYPRYSKKDYENMPEWKLDHLLVEYGLPTRGDLPYKRQFAMGAFLWPDF-----------HYSFKDPSLINKKV

KAF4351382.1 hypothetical protein G4B88_028221 [Cannabis sativa]1.8e-2365.06Show/hide
Query:  GGSFFQMPLHYPRYSKKDYENMPEWKLDHLLVEYGLPTRGDLPYKRQFAMGAFLWPDF-----------HYSFKDPSLINKKV
        G S+FQMPLHYPRY+KKDY++MPEWKLD LL EYGLPT GDL YKR FA+GAFLWP F           ++SF D SL++KKV
Subjt:  GGSFFQMPLHYPRYSKKDYENMPEWKLDHLLVEYGLPTRGDLPYKRQFAMGAFLWPDF-----------HYSFKDPSLINKKV

KAG6578420.1 hypothetical protein SDJN03_22868, partial [Cucurbita argyrosperma subsp. sororia]3.8e-2977.11Show/hide
Query:  MENN---GGGGSFFQMPLHYPRYSKKDYENMPEWKLDHLLVEYGLPTRGDLPYKRQFAMGAFLWPDFHYSFK-DPSLINKKVM
        MENN    GG +FFQMPLHYPRYSK DYENMPEWKLD LL+EYGLPT G+LPYKRQFAMGAFLW D+H +FK DPSL+N K+M
Subjt:  MENN---GGGGSFFQMPLHYPRYSKKDYENMPEWKLDHLLVEYGLPTRGDLPYKRQFAMGAFLWPDFHYSFK-DPSLINKKVM

PON37357.1 hypothetical protein PanWU01x14_320780 [Parasponia andersonii]1.8e-2367.53Show/hide
Query:  ENNGGGGSFFQMPLHYPRYSKKDYENMPEWKLDHLLVEYGLPTRGDLPYKRQFAMGAFLWPDFHYSFKDPSLINKKV
        +++  G S+FQMPLHYPRY+KKDY++MPEWKLD LL EYGL T GDL YKR FA+GAFLWPD+  +F D SL++KKV
Subjt:  ENNGGGGSFFQMPLHYPRYSKKDYENMPEWKLDHLLVEYGLPTRGDLPYKRQFAMGAFLWPDFHYSFKDPSLINKKV

XP_010108400.1 uncharacterized protein LOC21393700 [Morus notabilis]1.1e-2361.63Show/hide
Query:  ENNGGGGSFFQMPLHYPRYSKKDYENMPEWKLDHLLVEYGLPTRGDLPYKRQFAMGAFLWPDFHYSFKDP---------SLINKKV
        + N  G S+FQMPLHYPRY+K+DY++MPEWKLD LL +YGLPT GDL YKR FA+GAFLWPDFH   K P         SL++KK+
Subjt:  ENNGGGGSFFQMPLHYPRYSKKDYENMPEWKLDHLLVEYGLPTRGDLPYKRQFAMGAFLWPDFHYSFKDP---------SLINKKV

TrEMBL top hitse value%identityAlignment
A0A2P5ALC9 Uncharacterized protein8.9e-2467.53Show/hide
Query:  ENNGGGGSFFQMPLHYPRYSKKDYENMPEWKLDHLLVEYGLPTRGDLPYKRQFAMGAFLWPDFHYSFKDPSLINKKV
        +++  G S+FQMPLHYPRY+KKDY++MPEWKLD LL EYGL T GDL YKR FA+GAFLWPD+  +F D SL++KKV
Subjt:  ENNGGGGSFFQMPLHYPRYSKKDYENMPEWKLDHLLVEYGLPTRGDLPYKRQFAMGAFLWPDFHYSFKDPSLINKKV

A0A7J6DP11 Uncharacterized protein2.0e-2365.06Show/hide
Query:  GGSFFQMPLHYPRYSKKDYENMPEWKLDHLLVEYGLPTRGDLPYKRQFAMGAFLWPDF-----------HYSFKDPSLINKKV
        G S+FQMPLHYPRY+KKDY++MPEWKLD LL EYGLPT GDL YKR FA+GAFLWP F           ++SF D SL++KKV
Subjt:  GGSFFQMPLHYPRYSKKDYENMPEWKLDHLLVEYGLPTRGDLPYKRQFAMGAFLWPDF-----------HYSFKDPSLINKKV

A0A7J6DZ12 Uncharacterized protein8.9e-2465.06Show/hide
Query:  GGSFFQMPLHYPRYSKKDYENMPEWKLDHLLVEYGLPTRGDLPYKRQFAMGAFLWPDF-----------HYSFKDPSLINKKV
        G S+FQMPLHYPRY+KKDY++MPEWKLD LL EYGLPT GDL YKR FA+GAFLWP F           ++SF D SL++KKV
Subjt:  GGSFFQMPLHYPRYSKKDYENMPEWKLDHLLVEYGLPTRGDLPYKRQFAMGAFLWPDF-----------HYSFKDPSLINKKV

A0A803NG19 Uncharacterized protein2.0e-2365.06Show/hide
Query:  GGSFFQMPLHYPRYSKKDYENMPEWKLDHLLVEYGLPTRGDLPYKRQFAMGAFLWPDF-----------HYSFKDPSLINKKV
        G S+FQMPLHYPRY+KKDY++MPEWKLD LL EYGLPT GDL YKR FA+GAFLWP F           ++SF D SL++KKV
Subjt:  GGSFFQMPLHYPRYSKKDYENMPEWKLDHLLVEYGLPTRGDLPYKRQFAMGAFLWPDF-----------HYSFKDPSLINKKV

W9SNS4 Uncharacterized protein5.2e-2461.63Show/hide
Query:  ENNGGGGSFFQMPLHYPRYSKKDYENMPEWKLDHLLVEYGLPTRGDLPYKRQFAMGAFLWPDFHYSFKDP---------SLINKKV
        + N  G S+FQMPLHYPRY+K+DY++MPEWKLD LL +YGLPT GDL YKR FA+GAFLWPDFH   K P         SL++KK+
Subjt:  ENNGGGGSFFQMPLHYPRYSKKDYENMPEWKLDHLLVEYGLPTRGDLPYKRQFAMGAFLWPDFHYSFKDP---------SLINKKV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G09950.1 unknown protein3.1e-1360.71Show/hide
Query:  SFFQMPLHYPRYSKKDYENMPEWKLDHLLVEYGLPTRGD--LPYKRQFAMGAFLWP
        S F+MPLHYPRY+K+DYE M EW+LD LL EYGL    D  L  KR FA+  F+WP
Subjt:  SFFQMPLHYPRYSKKDYENMPEWKLDHLLVEYGLPTRGD--LPYKRQFAMGAFLWP

AT3G11405.1 unknown protein1.0e-1159.26Show/hide
Query:  SFFQMPLHYPRYSKKDYENMPEWKLDHLLVEYGLPTR-GDLPYKRQFAMGAFLW
        S FQMPL YP Y+K+ Y+ M E +LD LL  YGLPT  G+L  K++FA+GAFLW
Subjt:  SFFQMPLHYPRYSKKDYENMPEWKLDHLLVEYGLPTR-GDLPYKRQFAMGAFLW

AT3G55570.1 unknown protein2.4e-2161.11Show/hide
Query:  GGGSFFQMPLHYPRYSKKDYENMPEWKLDHLLVEYGLPTRGDLPYKRQFAMGAFLWPDFHYSFKDPSLINKK
        G GS F+MPLHYPRYSK+DY++MPEWKLD +L +YGL T GDL +KR FA+GAFLW     S ++P L  +K
Subjt:  GGGSFFQMPLHYPRYSKKDYENMPEWKLDHLLVEYGLPTRGDLPYKRQFAMGAFLWPDFHYSFKDPSLINKK

AT5G41761.1 unknown protein1.2e-1769.81Show/hide
Query:  SFFQMPLHYPRYSKKDYENMPEWKLDHLLVEYGLPTRGDLPYKRQFAMGAFLW
        S FQ+PLHYP+Y+K DYE MPEW+LD LL EYGLP  GD   KR+FA+GAFLW
Subjt:  SFFQMPLHYPRYSKKDYENMPEWKLDHLLVEYGLPTRGDLPYKRQFAMGAFLW

AT5G55620.1 unknown protein4.1e-1358.18Show/hide
Query:  SFFQMPLHYPRYSKKDYENMPEWKLDHLLVEYGLPTRGDLPYKRQFAMGAFLWPD
        S FQ+PLHYP+YSK DYE M + +LD LL +YG    G L  KR FA+ +FLWPD
Subjt:  SFFQMPLHYPRYSKKDYENMPEWKLDHLLVEYGLPTRGDLPYKRQFAMGAFLWPD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAACAATGGAGGAGGAGGCAGCTTCTTTCAAATGCCACTTCACTATCCGAGATACTCGAAGAAGGACTACGAGAACATGCCTGAATGGAAGCTCGACCACCTTCT
TGTTGAGTACGGTCTCCCGACTCGTGGTGACTTGCCCTATAAACGACAGTTCGCTATGGGTGCTTTCCTTTGGCCTGATTTCCACTATAGCTTTAAAGATCCCTCTCTTA
TTAATAAGAAAGTTATGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGAACAATGGAGGAGGAGGCAGCTTCTTTCAAATGCCACTTCACTATCCGAGATACTCGAAGAAGGACTACGAGAACATGCCTGAATGGAAGCTCGACCACCTTCT
TGTTGAGTACGGTCTCCCGACTCGTGGTGACTTGCCCTATAAACGACAGTTCGCTATGGGTGCTTTCCTTTGGCCTGATTTCCACTATAGCTTTAAAGATCCCTCTCTTA
TTAATAAGAAAGTTATGTAG
Protein sequenceShow/hide protein sequence
MENNGGGGSFFQMPLHYPRYSKKDYENMPEWKLDHLLVEYGLPTRGDLPYKRQFAMGAFLWPDFHYSFKDPSLINKKVM