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HG10018505 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10018505
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionProtein of unknown function (DUF 3339)
Genome locationChr04:4766783..4767964
RNA-Seq ExpressionHG10018505
SyntenyHG10018505
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR021775 - Protein of unknown function DUF3339


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056546.1 hypothetical protein E6C27_scaffold288G00480 [Cucumis melo var. makuwa]2.6e-5077.03Show/hide
Query:  MSADWGPVVVAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILIIAIERREEEVTGSASVDVDMESENEDGIEDEEDERVYSDS
        MSADWGPVVVAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAIL                 ER+EEEVTGSASVDVDMESENE+ IEDEEDE VYS+S
Subjt:  MSADWGPVVVAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILIIAIERREEEVTGSASVDVDMESENEDGIEDEEDERVYSDS

Query:  LAVGLHAPELKLPIISRKLEQKPRREQYEQYNSDHHRCPIRHTFTDIV
         +VGLHAPELKL II  KL+QKP R+QYE+YNSD H CPIRH+FTDIV
Subjt:  LAVGLHAPELKLPIISRKLEQKPRREQYEQYNSDHHRCPIRHTFTDIV

KAE8652261.1 hypothetical protein Csa_022581 [Cucumis sativus]1.7e-5481.76Show/hide
Query:  MSADWGPVVVAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILIIAIERREEEVTGSASVDVDMESENEDGIEDEEDERVYSDS
        MSADWGPVVVAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILIIAI          ASVDVDMESENED IEDEEDE VYS+S
Subjt:  MSADWGPVVVAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILIIAIERREEEVTGSASVDVDMESENEDGIEDEEDERVYSDS

Query:  LAVGLHAPELKLPIISRKLEQKPRREQYEQYNSDHHRCPIRHTFTDIV
         ++GLHAP+LKL II+RKL+QK RR+QYE+YNSD HRCPIRH+F D V
Subjt:  LAVGLHAPELKLPIISRKLEQKPRREQYEQYNSDHHRCPIRHTFTDIV

KAG6578364.1 hypothetical protein SDJN03_22812, partial [Cucurbita argyrosperma subsp. sororia]3.9e-5478.67Show/hide
Query:  MSADWGPVVVAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILIIAIERREEEVTGSASVDVDMESENEDGIEDEEDERVYSDS
        M+ADWGPVVVAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTIL+IAI          AS+DVD ESENEDG++D+E+ERV  D 
Subjt:  MSADWGPVVVAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILIIAIERREEEVTGSASVDVDMESENEDGIEDEEDERVYSDS

Query:  LAVGLHAPELKLPIISRKLEQKPRREQYEQYNSDHHRCPIRHTFTDIVIH
        L+VGLH P+LKL II RKLEQKP REQYEQYNSDH+RCPIRH F D V+H
Subjt:  LAVGLHAPELKLPIISRKLEQKPRREQYEQYNSDHHRCPIRHTFTDIVIH

KAG6602686.1 Actin-related protein 2/3 complex subunit 2A, partial [Cucurbita argyrosperma subsp. sororia]8.3e-4964.02Show/hide
Query:  MSADWGPVVVAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILIIAI-------------------------------------
        MSADWGPVVVAVALFI+LSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTIL+IAI                                     
Subjt:  MSADWGPVVVAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILIIAI-------------------------------------

Query:  -----ERREEEVTGSASVDVDMESENEDGIEDEEDERVYSDSLAVGLHAPELKLPIISRKLEQKPRREQYEQYNSDHHRCPIRHTFTDI
             E REEEVTGS+ VDVDM+SENEDGIEDEEDE +   S  V LH PELKLPII R+LEQKP R+Q+EQ NSDHH  PIRH   DI
Subjt:  -----ERREEEVTGSASVDVDMESENEDGIEDEEDERVYSDSLAVGLHAPELKLPIISRKLEQKPRREQYEQYNSDHHRCPIRHTFTDI

RZB59728.1 hypothetical protein D0Y65_042794 [Glycine soja]8.4e-4167.81Show/hide
Query:  MSADWGPVVVAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILIIAIERREEEVTGSASVDVDMESENEDGIEDEEDERVYSDS
        M ADWGPV++AVALFILLSPGLLFQ PAR RVVEFGNM+TSGIAILVHAIIFFCILTILI          TGSA VD+D   E+EDG+E EEDERV  + 
Subjt:  MSADWGPVVVAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILIIAIERREEEVTGSASVDVDMESENEDGIEDEEDERVYSDS

Query:  LAVGLHAPELKLPIISRKLEQKPRREQYEQYNSDHHRCPIRHTFTD
         AVGLHA ELKL  + RK E++PR EQ+EQ   D +RCPI H  TD
Subjt:  LAVGLHAPELKLPIISRKLEQKPRREQYEQYNSDHHRCPIRHTFTD

TrEMBL top hitse value%identityAlignment
A0A445GEX9 Uncharacterized protein4.0e-4167.81Show/hide
Query:  MSADWGPVVVAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILIIAIERREEEVTGSASVDVDMESENEDGIEDEEDERVYSDS
        M ADWGPV++AVALFILLSPGLLFQ PAR RVVEFGNM+TSGIAILVHAIIFFCILTILI          TGSA VD+D   E+EDG+E EEDERV  + 
Subjt:  MSADWGPVVVAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILIIAIERREEEVTGSASVDVDMESENEDGIEDEEDERVYSDS

Query:  LAVGLHAPELKLPIISRKLEQKPRREQYEQYNSDHHRCPIRHTFTD
         AVGLHA ELKL  + RK E++PR EQ+EQ   D +RCPI H  TD
Subjt:  LAVGLHAPELKLPIISRKLEQKPRREQYEQYNSDHHRCPIRHTFTD

A0A498HDU7 Uncharacterized protein1.9e-3556.69Show/hide
Query:  MSADWGPVVVAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILI------------------IAIERREEEVTGSASVDVDMES
        MSADWGPVVVAV +FILLSPGLLFQLPAR RV+EFGNM+TSGIAILVHA+I+FCI+TIL                   I  +     VTGSA +DVD++ 
Subjt:  MSADWGPVVVAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILI------------------IAIERREEEVTGSASVDVDMES

Query:  ENEDGIEDEEDERVYSDSLAVGLHAPELKLPIISRKLEQKPRREQYEQYNSDHHRCP
        ++E+GIE+EE+E V SD LAVGLHAP+L+L  +SR+ E++PR +Q +Q++S  +  P
Subjt:  ENEDGIEDEEDERVYSDSLAVGLHAPELKLPIISRKLEQKPRREQYEQYNSDHHRCP

A0A4D8YM52 Uncharacterized protein1.4e-3055.63Show/hide
Query:  MSADWGPVVVAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILIIAIERREEEVTGSASVDVDMESENEDGIEDEEDERVYSDS
        M  DWGPVVVAVA+FILLSPGLLFQLPAR RV+EFGNM TSGI+IL+HAI++FCI TI+++AI                       G++ EEDE V  DS
Subjt:  MSADWGPVVVAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILIIAIERREEEVTGSASVDVDMESENEDGIEDEEDERVYSDS

Query:  LAVGLHAPELKLPIISRKLEQKPRREQYEQYNSDHHRCPIRH
         AVG  A +L L  +S +LE+KPR ++YE+YNS  HR P+RH
Subjt:  LAVGLHAPELKLPIISRKLEQKPRREQYEQYNSDHHRCPIRH

A0A5A7QQI9 Uncharacterized protein1.2e-3763.57Show/hide
Query:  DWGPVVVAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFC-ILTILIIAIERREEEVTGSASVDVDMESENEDGIEDEEDERVYSDSLA
        DWGPVVVAVA+FILLSPGLLFQLPAR RV+EFGNM TSGI+ILVHAI++F  ++ +    I    E  TGSA VDVD++ E+E+ +E EEDERV  +SLA
Subjt:  DWGPVVVAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFC-ILTILIIAIERREEEVTGSASVDVDMESENEDGIEDEEDERVYSDSLA

Query:  VGLHAPELKLPIISRKLEQKPRREQYEQYNSDHHRCPIRH
        VGLHA EL+L ++ R L+Q+PR +QYE+YNSD HR P+ H
Subjt:  VGLHAPELKLPIISRKLEQKPRREQYEQYNSDHHRCPIRH

A0A5D3BWV4 Uncharacterized protein1.3e-5077.03Show/hide
Query:  MSADWGPVVVAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILIIAIERREEEVTGSASVDVDMESENEDGIEDEEDERVYSDS
        MSADWGPVVVAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAIL                 ER+EEEVTGSASVDVDMESENE+ IEDEEDE VYS+S
Subjt:  MSADWGPVVVAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILIIAIERREEEVTGSASVDVDMESENEDGIEDEEDERVYSDS

Query:  LAVGLHAPELKLPIISRKLEQKPRREQYEQYNSDHHRCPIRHTFTDIV
         +VGLHAPELKL II  KL+QKP R+QYE+YNSD H CPIRH+FTDIV
Subjt:  LAVGLHAPELKLPIISRKLEQKPRREQYEQYNSDHHRCPIRHTFTDIV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G01940.1 Protein of unknown function (DUF 3339)6.6e-2077.42Show/hide
Query:  ADWGPVVVAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILIIAIE
        ADWGPV VAV LF++LSPGLLFQLPAR RV+E GNM TSGI+ILVHAI+FF I+TIL+IAI+
Subjt:  ADWGPVVVAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILIIAIE

AT3G27027.1 Protein of unknown function (DUF 3339)4.4e-2485.94Show/hide
Query:  MSADWGPVVVAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILIIAIE
        MS DWGPV+VAV+LFILLSPGLLFQLPAR RVVEFGNM TSGIAILVHA I+FCILTIL+IAI+
Subjt:  MSADWGPVVVAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILIIAIE

AT3G48660.1 Protein of unknown function (DUF 3339)1.3e-1877.05Show/hide
Query:  ADWGPVVVAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILIIAI
        ADWGPVVVAV LF+LL+PGLLFQ+PAR RVVEFGNM TSG +ILVH IIFF ++TI  IAI
Subjt:  ADWGPVVVAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILIIAI

AT5G40980.1 Protein of unknown function (DUF 3339)6.8e-2589.06Show/hide
Query:  MSADWGPVVVAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILIIAIE
        MSADWGPV+VAVALFILLSPGLLFQLPAR RV+EFGNM+TSGI+ILVHAII+FCILTILIIAI+
Subjt:  MSADWGPVVVAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILIIAIE

AT5G63500.1 Protein of unknown function (DUF 3339)8.1e-1873.77Show/hide
Query:  ADWGPVVVAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILIIAI
        ADWGPV++AV LF++LSPGLLFQ+PA  RVVEFGNM TSG +ILVHAIIFF ++TI  IAI
Subjt:  ADWGPVVVAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILIIAI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGCAGACTGGGGACCGGTTGTAGTGGCGGTGGCGCTGTTCATTCTCCTGTCGCCGGGGCTGCTTTTTCAGTTGCCAGCGAGAATCAGGGTGGTGGAGTTTGGGAA
TATGAACACTAGTGGGATTGCCATTTTGGTACACGCCATCATATTCTTCTGCATACTCACCATATTGATCATCGCAATTGAGAGGCGAGAAGAAGAGGTTACCGGATCAG
CCAGTGTAGATGTGGATATGGAGAGCGAGAATGAAGACGGCATAGAGGATGAAGAAGATGAGCGTGTGTATAGCGACAGCCTTGCCGTTGGTCTTCATGCTCCCGAACTC
AAACTGCCGATTATTTCCCGGAAACTGGAACAGAAGCCCCGGAGAGAGCAGTACGAACAGTACAACTCCGATCACCACCGGTGCCCAATCCGACATACTTTCACAGATAT
CGTAATTCACAAAACGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTGCAGACTGGGGACCGGTTGTAGTGGCGGTGGCGCTGTTCATTCTCCTGTCGCCGGGGCTGCTTTTTCAGTTGCCAGCGAGAATCAGGGTGGTGGAGTTTGGGAA
TATGAACACTAGTGGGATTGCCATTTTGGTACACGCCATCATATTCTTCTGCATACTCACCATATTGATCATCGCAATTGAGAGGCGAGAAGAAGAGGTTACCGGATCAG
CCAGTGTAGATGTGGATATGGAGAGCGAGAATGAAGACGGCATAGAGGATGAAGAAGATGAGCGTGTGTATAGCGACAGCCTTGCCGTTGGTCTTCATGCTCCCGAACTC
AAACTGCCGATTATTTCCCGGAAACTGGAACAGAAGCCCCGGAGAGAGCAGTACGAACAGTACAACTCCGATCACCACCGGTGCCCAATCCGACATACTTTCACAGATAT
CGTAATTCACAAAACGTAA
Protein sequenceShow/hide protein sequence
MSADWGPVVVAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILIIAIERREEEVTGSASVDVDMESENEDGIEDEEDERVYSDSLAVGLHAPEL
KLPIISRKLEQKPRREQYEQYNSDHHRCPIRHTFTDIVIHKT