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HG10018506 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10018506
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionProtein of unknown function (DUF 3339)
Genome locationChr04:4766816..4767025
RNA-Seq ExpressionHG10018506
SyntenyHG10018506
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR021775 - Protein of unknown function DUF3339


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008441322.1 PREDICTED: uncharacterized protein LOC103485472 isoform X1 [Cucumis melo]3.3e-2998.55Show/hide
Query:  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAVAIHTLIFFILYAVFILALHIHIYTG
        MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAVAIHTLIFF+LYAVFILALHIHIYTG
Subjt:  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAVAIHTLIFFILYAVFILALHIHIYTG

XP_008441325.2 PREDICTED: uncharacterized protein LOC103485472 isoform X2 [Cucumis melo]3.3e-2998.55Show/hide
Query:  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAVAIHTLIFFILYAVFILALHIHIYTG
        MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAVAIHTLIFF+LYAVFILALHIHIYTG
Subjt:  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAVAIHTLIFFILYAVFILALHIHIYTG

XP_011649954.2 uncharacterized protein LOC101211888 [Cucumis sativus]3.3e-2998.55Show/hide
Query:  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAVAIHTLIFFILYAVFILALHIHIYTG
        MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAVAIHTLIFF+LYAVFILALHIHIYTG
Subjt:  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAVAIHTLIFFILYAVFILALHIHIYTG

XP_023551540.1 uncharacterized protein LOC111809330 [Cucurbita pepo subsp. pepo]2.8e-2897.1Show/hide
Query:  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAVAIHTLIFFILYAVFILALHIHIYTG
        MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKA+AIHTLIFFILYAVFILAL IHIYTG
Subjt:  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAVAIHTLIFFILYAVFILALHIHIYTG

XP_038884726.1 uncharacterized protein LOC120075418 [Benincasa hispida]7.4e-2997.1Show/hide
Query:  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAVAIHTLIFFILYAVFILALHIHIYTG
        MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAVAIHTLIFFILY+VFILALH+HIYTG
Subjt:  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAVAIHTLIFFILYAVFILALHIHIYTG

TrEMBL top hitse value%identityAlignment
A0A0A0LMK8 Uncharacterized protein1.6e-2998.55Show/hide
Query:  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAVAIHTLIFFILYAVFILALHIHIYTG
        MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAVAIHTLIFF+LYAVFILALHIHIYTG
Subjt:  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAVAIHTLIFFILYAVFILALHIHIYTG

A0A1S3B371 uncharacterized protein LOC103485472 isoform X21.6e-2998.55Show/hide
Query:  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAVAIHTLIFFILYAVFILALHIHIYTG
        MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAVAIHTLIFF+LYAVFILALHIHIYTG
Subjt:  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAVAIHTLIFFILYAVFILALHIHIYTG

A0A1S3B3X3 uncharacterized protein LOC103485472 isoform X11.6e-2998.55Show/hide
Query:  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAVAIHTLIFFILYAVFILALHIHIYTG
        MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAVAIHTLIFF+LYAVFILALHIHIYTG
Subjt:  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAVAIHTLIFFILYAVFILALHIHIYTG

A0A6J1FLS0 uncharacterized protein LOC1114451201.4e-2897.1Show/hide
Query:  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAVAIHTLIFFILYAVFILALHIHIYTG
        MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKA+AIHTLIFFILYAVFILAL IHIYTG
Subjt:  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAVAIHTLIFFILYAVFILALHIHIYTG

A0A6J1K207 uncharacterized protein LOC1114894121.4e-2897.1Show/hide
Query:  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAVAIHTLIFFILYAVFILALHIHIYTG
        MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKA+AIHTLIFFILYAVFILAL IHIYTG
Subjt:  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAVAIHTLIFFILYAVFILALHIHIYTG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G27030.1 unknown protein5.3e-2571.01Show/hide
Query:  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAVAIHTLIFFILYAVFILALHIHIYTG
        M+DWAPV++GVVLFV+LSPGLLF  PGNNR  +FG +KTNGKA+A+HTLIFF +Y + ILAL++HIYTG
Subjt:  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAVAIHTLIFFILYAVFILALHIHIYTG

AT3G48660.1 Protein of unknown function (DUF 3339)9.7e-1956.52Show/hide
Query:  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAVAIHTLIFFILYAVFILALHIHIYTG
        M+DW PVV+ V+LFVLL+PGLLFQ P   R  EFG+M+T+G ++ +HT+IFF L  +F +A+ +HIYTG
Subjt:  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAVAIHTLIFFILYAVFILALHIHIYTG

AT5G08391.1 Protein of unknown function (DUF 3339)3.1e-1755.07Show/hide
Query:  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAVAIHTLIFFILYAVFILALHIHIYTG
        MSDW PV++ V+LFV+L+PGLLFQ PG  +  EFG+ +T+  +V +H+L++F L  VF+LAL IHIY G
Subjt:  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAVAIHTLIFFILYAVFILALHIHIYTG

AT5G40970.1 Protein of unknown function (DUF 3339)5.5e-2265.22Show/hide
Query:  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAVAIHTLIFFILYAVFILALHIHIYTG
        M+DWAPV++GVVLFV+LSPGLLF  PG++   +FG MKTNGKA+A+HTLIFF  Y + ILA+++HI TG
Subjt:  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAVAIHTLIFFILYAVFILALHIHIYTG

AT5G63500.1 Protein of unknown function (DUF 3339)1.1e-1753.62Show/hide
Query:  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAVAIHTLIFFILYAVFILALHIHIYTG
        M+DW PV+I V+LFV+LSPGLLFQ P   R  EFG+M+T+G ++ +H +IFF L  +F +A+++HIY+G
Subjt:  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAVAIHTLIFFILYAVFILALHIHIYTG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGATTGGGCACCGGTGGTGATCGGAGTTGTACTGTTCGTACTGCTCTCTCCGGGGCTTCTGTTCCAGTTTCCGGGAAATAATCGGCAGTTTGAGTTCGGGAGCAT
GAAGACCAACGGCAAGGCTGTCGCTATACACACGCTCATCTTCTTCATCCTCTATGCCGTCTTCATTCTCGCTCTCCATATCCACATCTACACTGGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGGATTGGGCACCGGTGGTGATCGGAGTTGTACTGTTCGTACTGCTCTCTCCGGGGCTTCTGTTCCAGTTTCCGGGAAATAATCGGCAGTTTGAGTTCGGGAGCAT
GAAGACCAACGGCAAGGCTGTCGCTATACACACGCTCATCTTCTTCATCCTCTATGCCGTCTTCATTCTCGCTCTCCATATCCACATCTACACTGGCTGA
Protein sequenceShow/hide protein sequence
MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAVAIHTLIFFILYAVFILALHIHIYTG