; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10018534 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10018534
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: 50S rib s in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Genome locationChr04:5026338..5026820
RNA-Seq ExpressionHG10018534
SyntenyHG10018534
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022939119.1 uncharacterized protein LOC111445119 [Cucurbita moschata]3.0e-7393.12Show/hide
Query:  MATLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDSSADPQDVADDDDDDDNMIPEKNEKEVRARRKLKDLFVSSPPLE
        MATLHKFKLLASQCAVAG PT+SPTASPV HLRRRRRKTLRMLLNR DRRRFPYQD+SADPQDV DDDDDDDNMIPEKN+KEVRARRKLKDLFVSSPPLE
Subjt:  MATLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDSSADPQDVADDDDDDDNMIPEKNEKEVRARRKLKDLFVSSPPLE

Query:  DKVSDRRIEEQEGLLTTANTSAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE
        DKVSDRRIEEQE LLTTANTSAAGIG+PS TRRSLRPISATFRYRFLRRAWRPVLV IPE
Subjt:  DKVSDRRIEEQEGLLTTANTSAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE

XP_022993370.1 uncharacterized protein LOC111489414 [Cucurbita maxima]7.9e-7493.75Show/hide
Query:  MATLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDSSADPQDVADDDDDDDNMIPEKNEKEVRARRKLKDLFVSSPPLE
        MATLHKFKLLASQCAVAG PT+SPTASPV HLRRRRRKTLRMLLNRTDRRRFPYQD+SADPQDV DDDDDDDNMIPEKN+KEVRARRKLKDLFVSSPPLE
Subjt:  MATLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDSSADPQDVADDDDDDDNMIPEKNEKEVRARRKLKDLFVSSPPLE

Query:  DKVSDRRIEEQEGLLTTANTSAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE
        DKVSDRRIEEQE LLTTANTSAAGIG+PS TRRSLRPISATFRYRFLRRAWRPVLV IPE
Subjt:  DKVSDRRIEEQEGLLTTANTSAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE

XP_023546418.1 uncharacterized protein LOC111805523 [Cucurbita pepo subsp. pepo]5.6e-7293.12Show/hide
Query:  MATLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDSSADPQDVADDDDDDDNMIPEKNEKEVRARRKLKDLFVSSPPLE
        MATLHKFKLLASQCAV GSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQD+SADPQDV DDDDDD+NMIPEKN+KEVRARRKLKDLFVSSPPLE
Subjt:  MATLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDSSADPQDVADDDDDDDNMIPEKNEKEVRARRKLKDLFVSSPPLE

Query:  DKVSDRRIEEQEGLLTTANTSAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE
        DKVSDRRIEEQEGLLT  N SAAGIG+ STTRRSLRPIS TFRYRFLRRAWRPVLVAIPE
Subjt:  DKVSDRRIEEQEGLLTTANTSAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE

XP_023551541.1 uncharacterized protein LOC111809331 [Cucurbita pepo subsp. pepo]8.7e-7392.5Show/hide
Query:  MATLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDSSADPQDVADDDDDDDNMIPEKNEKEVRARRKLKDLFVSSPPLE
        MATLHKFKLLASQCAVAG PT+SPTASPV HLRRRRRKTLRMLLNR DRRRFPYQD+SADPQDV DDDDDDDNMIPEKN+KEVRARRKLKDLFVSSPPLE
Subjt:  MATLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDSSADPQDVADDDDDDDNMIPEKNEKEVRARRKLKDLFVSSPPLE

Query:  DKVSDRRIEEQEGLLTTANTSAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE
        DKVSDRRIEEQE LLTTANT AAGIG+PS TRRSLRPISATFRYRFLRRAWRPVLV IPE
Subjt:  DKVSDRRIEEQEGLLTTANTSAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE

XP_038885993.1 uncharacterized protein LOC120076298 [Benincasa hispida]3.0e-7394.38Show/hide
Query:  MATLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDSSADPQDVADDDDDDDNMIPEKNEKEVRARRKLKDLFVSSPPLE
        MATLHKFKLLASQCAVAGSPTRSP ASPVIHLRRRRRKTLRMLLNRTDRRRFPYQD+SAD QDV DDDDD D MIPEKNEKEVRARRKLKDLFVSSPPLE
Subjt:  MATLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDSSADPQDVADDDDDDDNMIPEKNEKEVRARRKLKDLFVSSPPLE

Query:  DKVSDRRIEEQEGLLTTANTSAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE
        DKVSDRRIEE+EG LT ANTSAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE
Subjt:  DKVSDRRIEEQEGLLTTANTSAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE

TrEMBL top hitse value%identityAlignment
A0A6J1BYN1 uncharacterized protein LOC1110064614.4e-7091.88Show/hide
Query:  MATLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDSSADPQDVADDDDDDDNMIPEKNEKEVRARRKLKDLFVSSPPLE
        MATLHKFKLLASQC VAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQD+SADPQDV DD++DD+NMIPEKNEKEVRARRKLKDLFVSSPP +
Subjt:  MATLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDSSADPQDVADDDDDDDNMIPEKNEKEVRARRKLKDLFVSSPPLE

Query:  DKVSDRRIEEQEGLLTTANTSAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE
        DKVSDRRIEEQEGLLT +NTSAAGIG+ STTRRSLRPIS+TFRYRFLRRAWRPVLVAIPE
Subjt:  DKVSDRRIEEQEGLLTTANTSAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE

A0A6J1FG66 uncharacterized protein LOC1114451191.4e-7393.12Show/hide
Query:  MATLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDSSADPQDVADDDDDDDNMIPEKNEKEVRARRKLKDLFVSSPPLE
        MATLHKFKLLASQCAVAG PT+SPTASPV HLRRRRRKTLRMLLNR DRRRFPYQD+SADPQDV DDDDDDDNMIPEKN+KEVRARRKLKDLFVSSPPLE
Subjt:  MATLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDSSADPQDVADDDDDDDNMIPEKNEKEVRARRKLKDLFVSSPPLE

Query:  DKVSDRRIEEQEGLLTTANTSAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE
        DKVSDRRIEEQE LLTTANTSAAGIG+PS TRRSLRPISATFRYRFLRRAWRPVLV IPE
Subjt:  DKVSDRRIEEQEGLLTTANTSAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE

A0A6J1H7N8 uncharacterized protein LOC1114609058.0e-7292.5Show/hide
Query:  MATLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDSSADPQDVADDDDDDDNMIPEKNEKEVRARRKLKDLFVSSPPLE
        MATLHKFKLLASQCAV GSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQD+SADPQDV DDDDDD+NMIPEKN+KEV+ARRKLKDLFVSSPPLE
Subjt:  MATLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDSSADPQDVADDDDDDDNMIPEKNEKEVRARRKLKDLFVSSPPLE

Query:  DKVSDRRIEEQEGLLTTANTSAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE
        DKVSDRRIEEQEGLLT  N SAAGIG+ STTRRSLRPIS TFRYRFLRRAWRPVLVAIPE
Subjt:  DKVSDRRIEEQEGLLTTANTSAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE

A0A6J1JSX9 uncharacterized protein LOC1114875513.6e-7293.12Show/hide
Query:  MATLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDSSADPQDVADDDDDDDNMIPEKNEKEVRARRKLKDLFVSSPPLE
        MATLHKFKLLASQCAV GSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQD+SADPQDV DDDDDD+NMIPEKN+KEVRARRKLKDLFVSSPPLE
Subjt:  MATLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDSSADPQDVADDDDDDDNMIPEKNEKEVRARRKLKDLFVSSPPLE

Query:  DKVSDRRIEEQEGLLTTANTSAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE
        D VSDRRIEEQEGLLT  NTSAAGIG+ STTRRSLRPIS TFRYRFLRRAWRPVLVAIPE
Subjt:  DKVSDRRIEEQEGLLTTANTSAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE

A0A6J1JYC4 uncharacterized protein LOC1114894143.8e-7493.75Show/hide
Query:  MATLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDSSADPQDVADDDDDDDNMIPEKNEKEVRARRKLKDLFVSSPPLE
        MATLHKFKLLASQCAVAG PT+SPTASPV HLRRRRRKTLRMLLNRTDRRRFPYQD+SADPQDV DDDDDDDNMIPEKN+KEVRARRKLKDLFVSSPPLE
Subjt:  MATLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDSSADPQDVADDDDDDDNMIPEKNEKEVRARRKLKDLFVSSPPLE

Query:  DKVSDRRIEEQEGLLTTANTSAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE
        DKVSDRRIEEQE LLTTANTSAAGIG+PS TRRSLRPISATFRYRFLRRAWRPVLV IPE
Subjt:  DKVSDRRIEEQEGLLTTANTSAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G66890.1 FUNCTIONS IN: molecular_function unknown1.8e-2042.77Show/hide
Query:  TLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNR-TDRRRFPYQDSSADPQDVADDDDDDDNMIPEKNEKEVRARRKLKDLFVSSPPLE-
        +L KFKLLA+ C+       SPT SPVIHL  RRRKTLR+LL R +DR R P   ++ D     D               ++R+ RKL DLFVSSPP E 
Subjt:  TLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNR-TDRRRFPYQDSSADPQDVADDDDDDDNMIPEKNEKEVRARRKLKDLFVSSPPLE-

Query:  -------DKVSDRRIEEQEGLLTTANTSAAGIGSPSTTRR-----SLRPISA-TFRYRFLRRAWRPVLVAIPE
               DK +   +E +  +     ++ AG G   T RR     S+RP+S+ T R R LRR+WRPVLV IPE
Subjt:  -------DKVSDRRIEEQEGLLTTANTSAAGIGSPSTTRR-----SLRPISA-TFRYRFLRRAWRPVLVAIPE

AT1G68430.1 unknown protein1.2e-0834.34Show/hide
Query:  MATLHKFKLLASQCAVAG-SPTRSPT--ASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDSSADPQDVADDDDDDDNMIPEKNEKEVRARRKLKDLFVSSP
        MATL +FK L +QC VA  SPTRSP+   SP++ L RR++ TL+MLL+                  +A     +   +   + K+V A RKLKDLFVSS 
Subjt:  MATLHKFKLLASQCAVAG-SPTRSPT--ASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDSSADPQDVADDDDDDDNMIPEKNEKEVRARRKLKDLFVSSP

Query:  PLEDKVSDRRIEEQEGLLTTANTSAAGIGSPSTTR---RSLRPISATFRYRFLRRAWRPVLVAIPE
          E++  +    + +         AA + + S  +       P+   F  R L+RAWRP L  I E
Subjt:  PLEDKVSDRRIEEQEGLLTTANTSAAGIGSPSTTR---RSLRPISATFRYRFLRRAWRPVLVAIPE

AT5G16200.1 50S ribosomal protein-related6.1e-1639.88Show/hide
Query:  MATLHKFKLLAS----QCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNR-TDRRRFPYQDSSADPQDVADDDDDDDNMIPEKNEKEVRARRKLKDLFVS
        ++ LHKFKL A+    + + AGSPT SPT SPV +L  RRRKTLRML ++ +D RR   +      Q + +  + D N   +K       RRKL++L V+
Subjt:  MATLHKFKLLAS----QCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNR-TDRRRFPYQDSSADPQDVADDDDDDDNMIPEKNEKEVRARRKLKDLFVS

Query:  --SPPLEDKVSDRRIEEQEGLLTTANTSAAGIGSPSTTRRSLRPISA-TFRYRFLRRAWRPVLVAIPE
          SPP + +     I E+   ++  N ++ G G   T RR     S  +FR R LR+ WRPVLV+IPE
Subjt:  --SPPLEDKVSDRRIEEQEGLLTTANTSAAGIGSPSTTRRSLRPISA-TFRYRFLRRAWRPVLVAIPE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACTTTGCATAAATTCAAGCTCTTAGCCTCTCAATGTGCCGTCGCTGGTAGCCCTACCCGAAGCCCCACTGCTAGTCCCGTCATTCACCTCCGCCGCCGCCGCCG
CAAAACCCTAAGAATGCTCCTCAATCGCACCGATCGCCGCCGTTTTCCCTATCAAGATAGCTCCGCCGATCCTCAAGATGTCGCCGACGACGATGATGACGACGACAATA
TGATTCCGGAGAAAAACGAGAAGGAGGTCCGAGCCAGACGGAAACTCAAGGATTTGTTCGTCTCATCGCCGCCGCTTGAGGATAAGGTTTCCGATAGGAGAATCGAAGAA
CAGGAGGGATTGTTAACGACGGCCAACACCAGCGCTGCCGGAATCGGTTCGCCCTCTACCACTCGCCGCTCTCTTAGGCCAATATCGGCGACATTTCGGTACAGATTTCT
CCGGCGAGCTTGGCGGCCGGTACTCGTTGCCATTCCCGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTACTTTGCATAAATTCAAGCTCTTAGCCTCTCAATGTGCCGTCGCTGGTAGCCCTACCCGAAGCCCCACTGCTAGTCCCGTCATTCACCTCCGCCGCCGCCGCCG
CAAAACCCTAAGAATGCTCCTCAATCGCACCGATCGCCGCCGTTTTCCCTATCAAGATAGCTCCGCCGATCCTCAAGATGTCGCCGACGACGATGATGACGACGACAATA
TGATTCCGGAGAAAAACGAGAAGGAGGTCCGAGCCAGACGGAAACTCAAGGATTTGTTCGTCTCATCGCCGCCGCTTGAGGATAAGGTTTCCGATAGGAGAATCGAAGAA
CAGGAGGGATTGTTAACGACGGCCAACACCAGCGCTGCCGGAATCGGTTCGCCCTCTACCACTCGCCGCTCTCTTAGGCCAATATCGGCGACATTTCGGTACAGATTTCT
CCGGCGAGCTTGGCGGCCGGTACTCGTTGCCATTCCCGAGTAG
Protein sequenceShow/hide protein sequence
MATLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDSSADPQDVADDDDDDDNMIPEKNEKEVRARRKLKDLFVSSPPLEDKVSDRRIEE
QEGLLTTANTSAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE