; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10018538 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10018538
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionzinc finger protein 6-like
Genome locationChr04:5048355..5048843
RNA-Seq ExpressionHG10018538
SyntenyHG10018538
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009736 - cytokinin-activated signaling pathway (biological process)
GO:0009740 - gibberellic acid mediated signaling pathway (biological process)
GO:0010090 - trichome morphogenesis (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily
IPR044299 - Zinc finger protein GIS3/ZFP5/ZFP6


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578343.1 Zinc finger protein 6, partial [Cucurbita argyrosperma subsp. sororia]1.3e-6075.93Show/hide
Query:  MSKSQLKLFGFNITKENKTVSHFTQPPSAVWPESENPHVPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSCHRNYFTALHVQNWLSSSFAPP
        M+ SQLKLFGFNI++++K+VS+FT+PP A  PES  PH PKFECQYCCR FSNSQALGGHQNAHREER+LLKRAQ+KSCH NYFT LHVQNWLSSSF P 
Subjt:  MSKSQLKLFGFNITKENKTVSHFTQPPSAVWPESENPHVPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSCHRNYFTALHVQNWLSSSFAPP

Query:  PTVVGAPPLAAGLYAMSRPPLSQEVRRQAGVFTGAVGVVGDEDVSGRSLGLDLQLSLGPGKP
        P     P  AAGL+AMSRP LSQ+V RQAGV TGAVG VGDE V GR LGLDLQLSLGP KP
Subjt:  PTVVGAPPLAAGLYAMSRPPLSQEVRRQAGVFTGAVGVVGDEDVSGRSLGLDLQLSLGPGKP

XP_022939247.1 zinc finger protein 6-like [Cucurbita moschata]2.0e-6175.93Show/hide
Query:  MSKSQLKLFGFNITKENKTVSHFTQPPSAVWPESENPHVPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSCHRNYFTALHVQNWLSSSFAPP
        M+ SQLKLFGFNI++++K+VS+FT+PP A  PES  PH PKFECQYCCR FSNSQALGGHQNAHREER+LLKRAQ+KSCH NYFT LH+ NWLSSSFAP 
Subjt:  MSKSQLKLFGFNITKENKTVSHFTQPPSAVWPESENPHVPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSCHRNYFTALHVQNWLSSSFAPP

Query:  PTVVGAPPLAAGLYAMSRPPLSQEVRRQAGVFTGAVGVVGDEDVSGRSLGLDLQLSLGPGKP
        P  +  PP AAGL+AMSRP LSQ+V RQAGV TGAVG VGDE V GR LGLDLQLSLGP KP
Subjt:  PTVVGAPPLAAGLYAMSRPPLSQEVRRQAGVFTGAVGVVGDEDVSGRSLGLDLQLSLGPGKP

XP_022993371.1 zinc finger protein 6-like [Cucurbita maxima]1.7e-6075.31Show/hide
Query:  MSKSQLKLFGFNITKENKTVSHFTQPPSAVWPESENPHVPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSCHRNYFTALHVQNWLSSSFAPP
        M+ SQLKLFGFNI++ + +VS+FT+PP A  PES  PH PKFECQYCCR FSNSQALGGHQNAHREER+LLKRAQ+KSCH NYFT LHV+NWLSSSF P 
Subjt:  MSKSQLKLFGFNITKENKTVSHFTQPPSAVWPESENPHVPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSCHRNYFTALHVQNWLSSSFAPP

Query:  PTVVGAPPLAAGLYAMSRPPLSQEVRRQAGVFTGAVGVVGDEDVSGRSLGLDLQLSLGPGKP
        P     P  AAGL+AMSRPPLSQ+V RQAGV TGAVG VGDE V GR LGLDLQLSLGP KP
Subjt:  PTVVGAPPLAAGLYAMSRPPLSQEVRRQAGVFTGAVGVVGDEDVSGRSLGLDLQLSLGPGKP

XP_023550962.1 zinc finger protein 6-like [Cucurbita pepo subsp. pepo]1.3e-6075.93Show/hide
Query:  MSKSQLKLFGFNITKENKTVSHFTQPPSAVWPESENPHVPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSCHRNYFTALHVQNWLSSSFAPP
        M+ SQLKLFGFNI++++K+VS+FT+PP A  PES  PH PKFECQYCCR FSNSQALGGHQNAHREER+LLKRAQ+KSCH NYFT LHVQNWLSSSF P 
Subjt:  MSKSQLKLFGFNITKENKTVSHFTQPPSAVWPESENPHVPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSCHRNYFTALHVQNWLSSSFAPP

Query:  PTVVGAPPLAAGLYAMSRPPLSQEVRRQAGVFTGAVGVVGDEDVSGRSLGLDLQLSLGPGKP
        P     P  AAGL+AMSRP LSQ+V RQAGV TGAVG VGDE V GR LGLDLQLSLGP KP
Subjt:  PTVVGAPPLAAGLYAMSRPPLSQEVRRQAGVFTGAVGVVGDEDVSGRSLGLDLQLSLGPGKP

XP_038886238.1 zinc finger protein 6-like [Benincasa hispida]3.8e-6882.53Show/hide
Query:  MSKSQLKLFGFNITKENKTVSHFTQPPSAV-WPESENPHVPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSCHRNYFTALHVQNWLSSSFAP
        M KS+LKLFGFNI+KE KTVS+ T+PP A+ WPESENPH PKFECQYCCREFSNSQALGGHQNAHREERQLLK AQMKSCHRNY TALHVQNWLSSSF P
Subjt:  MSKSQLKLFGFNITKENKTVSHFTQPPSAV-WPESENPHVPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSCHRNYFTALHVQNWLSSSFAP

Query:  P--PTVVGAPPLAAG-LYAMSRPPLSQEVRRQAGVFTGAVGVVGDEDVSGRSLGLDLQLSLGPGKP
        P  P VVG PP  A  +YAMSRP LSQEVRRQAG  TG +GVVGDEDVSG SLGLDLQLSLGPGKP
Subjt:  P--PTVVGAPPLAAG-LYAMSRPPLSQEVRRQAGVFTGAVGVVGDEDVSGRSLGLDLQLSLGPGKP

TrEMBL top hitse value%identityAlignment
A0A0A0LQ31 C2H2-type domain-containing protein3.7e-2470.59Show/hide
Query:  MSKSQLKLFGFNITKENKTVSHFTQPPSAV-WPESENPHVPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSCHRNYF
        +S S LKLFGF+I+KENK VS+F +PP  V  PESEN   PKFEC+YCCR+FSNSQALGGHQNAH+EERQLLK  Q+K   RNYF
Subjt:  MSKSQLKLFGFNITKENKTVSHFTQPPSAV-WPESENPHVPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSCHRNYF

A0A2I4DX61 zinc finger protein GIS3-like2.5e-2038.46Show/hide
Query:  LKLFGF---NITKENKTVSHFTQPPSAVWPESENPHVPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSCHRNYFTALHV-QNWLSSSFAPPP
        LKLFGF   N+++EN + S  T          ++    KFECQYCCREF+NSQALGGHQNAH++ERQLLKRAQM++       A H+ Q  + S+F PPP
Subjt:  LKLFGF---NITKENKTVSHFTQPPSAVWPESENPHVPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSCHRNYFTALHV-QNWLSSSFAPPP

Query:  ----TVVGAPPLAAGLYAMSRP-----------------------------------------PLSQEVRRQAGVFTGAVGVVGDEDVS--GRSLGLDLQ
              VGAPP +   + MS P                                           S  V   AG+  G  G   D   S   R LGLDLQ
Subjt:  ----TVVGAPPLAAGLYAMSRP-----------------------------------------PLSQEVRRQAGVFTGAVGVVGDEDVS--GRSLGLDLQ

Query:  LSLGPGKP
        L LGP  P
Subjt:  LSLGPGKP

A0A6A1VGC0 Zinc finger protein 64.2e-2038.89Show/hide
Query:  LKLFGFNI---TKENKTVSHFTQPPSAVWPESENPHVPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSCHRNYFTALHV-QNWLSSSFAPPP
        LKLFGFNI   ++EN + +  +   S      ++    K+ECQYCCREF+NSQALGGHQNAH++ERQLLKRAQM++       A H+ QN + S+F PP 
Subjt:  LKLFGFNI---TKENKTVSHFTQPPSAVWPESENPHVPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSCHRNYFTALHV-QNWLSSSFAPPP

Query:  TVV--GAPP------------------------------------LAAGLYAMSRPPLSQEVRRQAGVFTGAVGVVGDEDVS--GRSLGLDLQLSLGP
         +    APP                                     A G+        S  V  +AGV  G  G  GD +VS   + LGLDLQL LGP
Subjt:  TVV--GAPP------------------------------------LAAGLYAMSRPPLSQEVRRQAGVFTGAVGVVGDEDVS--GRSLGLDLQLSLGP

A0A6J1FG99 zinc finger protein 6-like9.9e-6275.93Show/hide
Query:  MSKSQLKLFGFNITKENKTVSHFTQPPSAVWPESENPHVPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSCHRNYFTALHVQNWLSSSFAPP
        M+ SQLKLFGFNI++++K+VS+FT+PP A  PES  PH PKFECQYCCR FSNSQALGGHQNAHREER+LLKRAQ+KSCH NYFT LH+ NWLSSSFAP 
Subjt:  MSKSQLKLFGFNITKENKTVSHFTQPPSAVWPESENPHVPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSCHRNYFTALHVQNWLSSSFAPP

Query:  PTVVGAPPLAAGLYAMSRPPLSQEVRRQAGVFTGAVGVVGDEDVSGRSLGLDLQLSLGPGKP
        P  +  PP AAGL+AMSRP LSQ+V RQAGV TGAVG VGDE V GR LGLDLQLSLGP KP
Subjt:  PTVVGAPPLAAGLYAMSRPPLSQEVRRQAGVFTGAVGVVGDEDVSGRSLGLDLQLSLGPGKP

A0A6J1JW51 zinc finger protein 6-like8.4e-6175.31Show/hide
Query:  MSKSQLKLFGFNITKENKTVSHFTQPPSAVWPESENPHVPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSCHRNYFTALHVQNWLSSSFAPP
        M+ SQLKLFGFNI++ + +VS+FT+PP A  PES  PH PKFECQYCCR FSNSQALGGHQNAHREER+LLKRAQ+KSCH NYFT LHV+NWLSSSF P 
Subjt:  MSKSQLKLFGFNITKENKTVSHFTQPPSAVWPESENPHVPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSCHRNYFTALHVQNWLSSSFAPP

Query:  PTVVGAPPLAAGLYAMSRPPLSQEVRRQAGVFTGAVGVVGDEDVSGRSLGLDLQLSLGPGKP
        P     P  AAGL+AMSRPPLSQ+V RQAGV TGAVG VGDE V GR LGLDLQLSLGP KP
Subjt:  PTVVGAPPLAAGLYAMSRPPLSQEVRRQAGVFTGAVGVVGDEDVSGRSLGLDLQLSLGPGKP

SwissProt top hitse value%identityAlignment
P93751 Zinc finger protein 82.3e-0744.62Show/hide
Query:  ESENPHVPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSC--HRNYFTALHVQNWLSS
        + +N +  +FEC YC R F  SQALGGHQNAH+ ERQ  KR  M S   H       H+  +L++
Subjt:  ESENPHVPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSC--HRNYFTALHVQNWLSS

Q39264 Zinc finger protein 51.2e-0839.13Show/hide
Query:  SKSQLKLFGFNITKENKTVSHFT-QPPSAVWPESENPHVPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSCHRN--YFTALHVQ
        S   +KLFGF +   ++T    T +  S+    +    + + ECQYC +EF+NSQALGGHQNAH++ER   KR Q+++   +  Y+   H Q
Subjt:  SKSQLKLFGFNITKENKTVSHFT-QPPSAVWPESENPHVPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSCHRN--YFTALHVQ

Q39265 Zinc finger protein 65.8e-1936.36Show/hide
Query:  SQLKLFGFNITKENKTVSHFTQPPSAVWPESENPHVPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSC-----HRNYFTALHVQNWLSSSFA
        S LKLFG N+ +     +  ++P       SE+    K+ECQYCCREF+NSQALGGHQNAH++ERQLLKRAQM +      H N+       N L S+FA
Subjt:  SQLKLFGFNITKENKTVSHFTQPPSAVWPESENPHVPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSC-----HRNYFTALHVQNWLSSSFA

Query:  ----------PPPTVVGAPPLAA----------------------GLYAMSRPPLSQEVRRQAGVFTGAVGVVGDEDVSG-----RSLGLDLQLSLGP
                  PPP ++ +P  ++                      GLY      ++ EV+   G         GD D S        +GLDL LSLGP
Subjt:  ----------PPPTVVGAPPLAA----------------------GLYAMSRPPLSQEVRRQAGVFTGAVGVVGDEDVSG-----RSLGLDLQLSLGP

Q84WI0 Zinc finger protein GIS3.0e-0735.14Show/hide
Query:  HVPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSCH---RNYFTALHVQNWLS------------SSFAPPPTVVGAPPLAAGLYAMSRPPLS
        H  +FEC YC R F  SQALGGHQNAH+ ERQL KR      +    N ++  H  +W +            SS   P      P   + L     PP  
Subjt:  HVPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSCH---RNYFTALHVQNWLS------------SSFAPPPTVVGAPPLAAGLYAMSRPPLS

Query:  QEVRRQAGVFT
        Q V      FT
Subjt:  QEVRRQAGVFT

Q9C9H1 Zinc finger protein GIS31.6e-1353.42Show/hide
Query:  KFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSCHR---NYFTA----LHVQNWLSSSFAPPPTVVGA
        K+ECQYCCREF NSQALGGHQNAH++ERQ LKRAQ+++      N+  A      ++N + S+FAPPP ++ +
Subjt:  KFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSCHR---NYFTA----LHVQNWLSSSFAPPPTVVGA

Arabidopsis top hitse value%identityAlignment
AT1G10480.1 zinc finger protein 58.7e-1039.13Show/hide
Query:  SKSQLKLFGFNITKENKTVSHFT-QPPSAVWPESENPHVPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSCHRN--YFTALHVQ
        S   +KLFGF +   ++T    T +  S+    +    + + ECQYC +EF+NSQALGGHQNAH++ER   KR Q+++   +  Y+   H Q
Subjt:  SKSQLKLFGFNITKENKTVSHFT-QPPSAVWPESENPHVPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSCHRN--YFTALHVQ

AT1G67030.1 zinc finger protein 64.1e-2036.36Show/hide
Query:  SQLKLFGFNITKENKTVSHFTQPPSAVWPESENPHVPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSC-----HRNYFTALHVQNWLSSSFA
        S LKLFG N+ +     +  ++P       SE+    K+ECQYCCREF+NSQALGGHQNAH++ERQLLKRAQM +      H N+       N L S+FA
Subjt:  SQLKLFGFNITKENKTVSHFTQPPSAVWPESENPHVPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSC-----HRNYFTALHVQNWLSSSFA

Query:  ----------PPPTVVGAPPLAA----------------------GLYAMSRPPLSQEVRRQAGVFTGAVGVVGDEDVSG-----RSLGLDLQLSLGP
                  PPP ++ +P  ++                      GLY      ++ EV+   G         GD D S        +GLDL LSLGP
Subjt:  ----------PPPTVVGAPPLAA----------------------GLYAMSRPPLSQEVRRQAGVFTGAVGVVGDEDVSG-----RSLGLDLQLSLGP

AT1G68360.1 C2H2 and C2HC zinc fingers superfamily protein1.2e-1453.42Show/hide
Query:  KFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSCHR---NYFTA----LHVQNWLSSSFAPPPTVVGA
        K+ECQYCCREF NSQALGGHQNAH++ERQ LKRAQ+++      N+  A      ++N + S+FAPPP ++ +
Subjt:  KFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSCHR---NYFTA----LHVQNWLSSSFAPPPTVVGA

AT2G41940.1 zinc finger protein 81.6e-0844.62Show/hide
Query:  ESENPHVPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSC--HRNYFTALHVQNWLSS
        + +N +  +FEC YC R F  SQALGGHQNAH+ ERQ  KR  M S   H       H+  +L++
Subjt:  ESENPHVPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSC--HRNYFTALHVQNWLSS

AT3G58070.1 C2H2 and C2HC zinc fingers superfamily protein2.1e-0835.14Show/hide
Query:  HVPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSCH---RNYFTALHVQNWLS------------SSFAPPPTVVGAPPLAAGLYAMSRPPLS
        H  +FEC YC R F  SQALGGHQNAH+ ERQL KR      +    N ++  H  +W +            SS   P      P   + L     PP  
Subjt:  HVPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSCH---RNYFTALHVQNWLS------------SSFAPPPTVVGAPPLAAGLYAMSRPPLS

Query:  QEVRRQAGVFT
        Q V      FT
Subjt:  QEVRRQAGVFT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTAAGTCTCAGCTGAAGCTTTTTGGCTTTAACATCACAAAAGAGAATAAAACAGTTTCACATTTTACACAGCCGCCGTCGGCGGTGTGGCCGGAATCTGAAAATCC
CCATGTCCCAAAGTTCGAGTGCCAATATTGTTGCAGAGAATTTTCCAATTCGCAAGCTTTGGGTGGCCATCAAAACGCCCATAGAGAAGAAAGACAGCTTTTGAAGAGAG
CTCAAATGAAATCTTGCCATCGTAATTATTTCACAGCTCTGCACGTGCAGAACTGGCTATCGTCGTCCTTTGCGCCGCCGCCGACGGTGGTGGGTGCTCCTCCACTGGCG
GCGGGGCTTTACGCTATGTCGCGGCCGCCGTTATCCCAAGAGGTTCGGCGGCAGGCCGGAGTTTTTACGGGGGCGGTCGGGGTTGTTGGAGATGAAGATGTTTCCGGTAG
GAGTTTGGGCCTGGATTTACAGCTTAGTCTTGGGCCTGGTAAGCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTAAGTCTCAGCTGAAGCTTTTTGGCTTTAACATCACAAAAGAGAATAAAACAGTTTCACATTTTACACAGCCGCCGTCGGCGGTGTGGCCGGAATCTGAAAATCC
CCATGTCCCAAAGTTCGAGTGCCAATATTGTTGCAGAGAATTTTCCAATTCGCAAGCTTTGGGTGGCCATCAAAACGCCCATAGAGAAGAAAGACAGCTTTTGAAGAGAG
CTCAAATGAAATCTTGCCATCGTAATTATTTCACAGCTCTGCACGTGCAGAACTGGCTATCGTCGTCCTTTGCGCCGCCGCCGACGGTGGTGGGTGCTCCTCCACTGGCG
GCGGGGCTTTACGCTATGTCGCGGCCGCCGTTATCCCAAGAGGTTCGGCGGCAGGCCGGAGTTTTTACGGGGGCGGTCGGGGTTGTTGGAGATGAAGATGTTTCCGGTAG
GAGTTTGGGCCTGGATTTACAGCTTAGTCTTGGGCCTGGTAAGCCTTGA
Protein sequenceShow/hide protein sequence
MSKSQLKLFGFNITKENKTVSHFTQPPSAVWPESENPHVPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSCHRNYFTALHVQNWLSSSFAPPPTVVGAPPLA
AGLYAMSRPPLSQEVRRQAGVFTGAVGVVGDEDVSGRSLGLDLQLSLGPGKP