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HG10018555 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10018555
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr04:5227817..5231995
RNA-Seq ExpressionHG10018555
SyntenyHG10018555
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004138812.2 uncharacterized protein DDB_G0290685 isoform X1 [Cucumis sativus]1.2e-5783.33Show/hide
Query:  METETSSVHQRLLLTCAGGISATLLSLVALAEVLASSQFIDLNKMYAIDASNEKRKPKSRRCQTTKPIDGEENENENNDSDNELGEDQEVLENGEEEGKN
        ME ET+SVHQRLLLT AGGISATL   VALAE+LASSQF+D NKM  IDAS+EKRK KSR+CQTT+PI+GEENENENNDSDNELGEDQ+V ENG EEGKN
Subjt:  METETSSVHQRLLLTCAGGISATLLSLVALAEVLASSQFIDLNKMYAIDASNEKRKPKSRRCQTTKPIDGEENENENNDSDNELGEDQEVLENGEEEGKN

Query:  A-PTKDGAN-GGEDASNDNGDGGSENSGEGGDDDEEDNDDGGSDKNNEDNNEDEEDVDEEDAEEDNFEEEDDDDEETLPPPKKRKK
        A PTKDGAN GGED SNDNGDGGSENSGEGGD++EE+NDDGGSD+NNEDNNED++DVDEEDAEEDNFE E +DDEETLPPPKKRKK
Subjt:  A-PTKDGAN-GGEDASNDNGDGGSENSGEGGDDDEEDNDDGGSDKNNEDNNEDEEDVDEEDAEEDNFEEEDDDDEETLPPPKKRKK

XP_008441238.1 PREDICTED: uncharacterized protein DDB_G0290685-like [Cucumis melo]4.5e-5782.07Show/hide
Query:  METETSSVHQRLLLTCAGGISATLLSLVALAEVLASSQFIDLNKMYAIDASNEKRKPKSRRCQTTKPIDGEENENENNDSDNELGEDQEVLENGEEEGKN
        ME E SSVHQRLLLT A GISATL   VALAE+LAS++F+D NKM  IDASNEKRK KSR+CQTT+  DGEENENENNDSDNELG+ Q+V ENGEEEGKN
Subjt:  METETSSVHQRLLLTCAGGISATLLSLVALAEVLASSQFIDLNKMYAIDASNEKRKPKSRRCQTTKPIDGEENENENNDSDNELGEDQEVLENGEEEGKN

Query:  APTKDGANGGEDASNDNGDGGSENSGEGGDDDEEDNDDGGSDKNNEDNNEDEEDVDEEDAEEDNFEEEDDDDEETLPPPKKRKK
        APTKDGANG ED SNDNGDGGSENSGEGG DDEE+NDDGGSD+NNEDNNED++DVDEEDAEEDNFE E +DDEETLPPPKKRKK
Subjt:  APTKDGANGGEDASNDNGDGGSENSGEGGDDDEEDNDDGGSDKNNEDNNEDEEDVDEEDAEEDNFEEEDDDDEETLPPPKKRKK

XP_011649914.1 uncharacterized protein DDB_G0290685 isoform X2 [Cucumis sativus]1.2e-5783.33Show/hide
Query:  METETSSVHQRLLLTCAGGISATLLSLVALAEVLASSQFIDLNKMYAIDASNEKRKPKSRRCQTTKPIDGEENENENNDSDNELGEDQEVLENGEEEGKN
        ME ET+SVHQRLLLT AGGISATL   VALAE+LASSQF+D NKM  IDAS+EKRK KSR+CQTT+PI+GEENENENNDSDNELGEDQ+V ENG EEGKN
Subjt:  METETSSVHQRLLLTCAGGISATLLSLVALAEVLASSQFIDLNKMYAIDASNEKRKPKSRRCQTTKPIDGEENENENNDSDNELGEDQEVLENGEEEGKN

Query:  A-PTKDGAN-GGEDASNDNGDGGSENSGEGGDDDEEDNDDGGSDKNNEDNNEDEEDVDEEDAEEDNFEEEDDDDEETLPPPKKRKK
        A PTKDGAN GGED SNDNGDGGSENSGEGGD++EE+NDDGGSD+NNEDNNED++DVDEEDAEEDNFE E +DDEETLPPPKKRKK
Subjt:  A-PTKDGAN-GGEDASNDNGDGGSENSGEGGDDDEEDNDDGGSDKNNEDNNEDEEDVDEEDAEEDNFEEEDDDDEETLPPPKKRKK

XP_038885474.1 uncharacterized protein DDB_G0290685-like isoform X1 [Benincasa hispida]3.1e-5883.6Show/hide
Query:  METETSSVHQRLLLTCAGGISATLLSLVALAEVLASSQFIDLNKMYAIDASNEKRKPKSRRCQTTKPIDGEENENENNDSDNELGEDQEVLENG-EEEGK
        METETSSVHQRLLL CA  ISATLL  VALAE+L SSQF+D NKM  IDAS EKRK KSR+CQTTKPIDGEENENENNDSDNELGEDQ+VLENG EEEGK
Subjt:  METETSSVHQRLLLTCAGGISATLLSLVALAEVLASSQFIDLNKMYAIDASNEKRKPKSRRCQTTKPIDGEENENENNDSDNELGEDQEVLENG-EEEGK

Query:  NAPTKDGANGGEDASNDNGDGGSENSGEGGDDDEEDNDDGGSDK----NNEDNNEDEEDVDEEDAEEDNFEEEDDDDEETLPPPKKRKK
        NAPTKDGANGG+ ASNDNGDGG ENSGEGG DDEEDNDDGGSD+    NNEDNNED+ED+DEEDAEED+F  E DDDEETLPPPKKRKK
Subjt:  NAPTKDGANGGEDASNDNGDGGSENSGEGGDDDEEDNDDGGSDK----NNEDNNEDEEDVDEEDAEEDNFEEEDDDDEETLPPPKKRKK

XP_038885476.1 uncharacterized protein DDB_G0290685-like isoform X2 [Benincasa hispida]3.1e-5883.6Show/hide
Query:  METETSSVHQRLLLTCAGGISATLLSLVALAEVLASSQFIDLNKMYAIDASNEKRKPKSRRCQTTKPIDGEENENENNDSDNELGEDQEVLENG-EEEGK
        METETSSVHQRLLL CA  ISATLL  VALAE+L SSQF+D NKM  IDAS EKRK KSR+CQTTKPIDGEENENENNDSDNELGEDQ+VLENG EEEGK
Subjt:  METETSSVHQRLLLTCAGGISATLLSLVALAEVLASSQFIDLNKMYAIDASNEKRKPKSRRCQTTKPIDGEENENENNDSDNELGEDQEVLENG-EEEGK

Query:  NAPTKDGANGGEDASNDNGDGGSENSGEGGDDDEEDNDDGGSDK----NNEDNNEDEEDVDEEDAEEDNFEEEDDDDEETLPPPKKRKK
        NAPTKDGANGG+ ASNDNGDGG ENSGEGG DDEEDNDDGGSD+    NNEDNNED+ED+DEEDAEED+F  E DDDEETLPPPKKRKK
Subjt:  NAPTKDGANGGEDASNDNGDGGSENSGEGGDDDEEDNDDGGSDK----NNEDNNEDEEDVDEEDAEEDNFEEEDDDDEETLPPPKKRKK

TrEMBL top hitse value%identityAlignment
A0A0A0LSW9 Uncharacterized protein5.8e-5883.33Show/hide
Query:  METETSSVHQRLLLTCAGGISATLLSLVALAEVLASSQFIDLNKMYAIDASNEKRKPKSRRCQTTKPIDGEENENENNDSDNELGEDQEVLENGEEEGKN
        ME ET+SVHQRLLLT AGGISATL   VALAE+LASSQF+D NKM  IDAS+EKRK KSR+CQTT+PI+GEENENENNDSDNELGEDQ+V ENG EEGKN
Subjt:  METETSSVHQRLLLTCAGGISATLLSLVALAEVLASSQFIDLNKMYAIDASNEKRKPKSRRCQTTKPIDGEENENENNDSDNELGEDQEVLENGEEEGKN

Query:  A-PTKDGAN-GGEDASNDNGDGGSENSGEGGDDDEEDNDDGGSDKNNEDNNEDEEDVDEEDAEEDNFEEEDDDDEETLPPPKKRKK
        A PTKDGAN GGED SNDNGDGGSENSGEGGD++EE+NDDGGSD+NNEDNNED++DVDEEDAEEDNFE E +DDEETLPPPKKRKK
Subjt:  A-PTKDGAN-GGEDASNDNGDGGSENSGEGGDDDEEDNDDGGSDKNNEDNNEDEEDVDEEDAEEDNFEEEDDDDEETLPPPKKRKK

A0A1S3B301 uncharacterized protein DDB_G0290685-like2.2e-5782.07Show/hide
Query:  METETSSVHQRLLLTCAGGISATLLSLVALAEVLASSQFIDLNKMYAIDASNEKRKPKSRRCQTTKPIDGEENENENNDSDNELGEDQEVLENGEEEGKN
        ME E SSVHQRLLLT A GISATL   VALAE+LAS++F+D NKM  IDASNEKRK KSR+CQTT+  DGEENENENNDSDNELG+ Q+V ENGEEEGKN
Subjt:  METETSSVHQRLLLTCAGGISATLLSLVALAEVLASSQFIDLNKMYAIDASNEKRKPKSRRCQTTKPIDGEENENENNDSDNELGEDQEVLENGEEEGKN

Query:  APTKDGANGGEDASNDNGDGGSENSGEGGDDDEEDNDDGGSDKNNEDNNEDEEDVDEEDAEEDNFEEEDDDDEETLPPPKKRKK
        APTKDGANG ED SNDNGDGGSENSGEGG DDEE+NDDGGSD+NNEDNNED++DVDEEDAEEDNFE E +DDEETLPPPKKRKK
Subjt:  APTKDGANGGEDASNDNGDGGSENSGEGGDDDEEDNDDGGSDKNNEDNNEDEEDVDEEDAEEDNFEEEDDDDEETLPPPKKRKK

A0A6J1DGC0 uncharacterized protein DDB_G0290685-like2.3e-4372.49Show/hide
Query:  METETSSVHQRLLLTCAGGISATLLSLVALAEVLASSQFIDLNKMYAIDASNEKRKPKSRRCQTTKPIDGEENENENNDSDNELGEDQEVLENGEEEGKN
        METE+SSVH+RLLLTCAGGISA LLSL+A+AE+LASSQF++ N       +NEKRK     CQ  KP+DGE NENENN SDN+LGED++VLENGEEEGKN
Subjt:  METETSSVHQRLLLTCAGGISATLLSLVALAEVLASSQFIDLNKMYAIDASNEKRKPKSRRCQTTKPIDGEENENENNDSDNELGEDQEVLENGEEEGKN

Query:  APTKDGANGGEDA--SNDNGDGGSENSGEGGDDDEEDNDDGGSDKNNEDNNEDEEDVDEEDA---EEDNFEEEDDDDEETLPPPKKRKK
        AP K+GANGG DA  SNDN DGGS+NSG+GGDD   DNDDGGSD N+EDNNED+EDVDE+DA   EEDNFE E  +DEETLPPPKKRKK
Subjt:  APTKDGANGGEDA--SNDNGDGGSENSGEGGDDDEEDNDDGGSDKNNEDNNEDEEDVDEEDA---EEDNFEEEDDDDEETLPPPKKRKK

A0A6J1FG81 uncharacterized protein DDB_G0290685-like isoform X11.2e-4271.74Show/hide
Query:  METETSSVHQRLLLTCAGGISATLLSLVALAEVLASSQFIDLNKMYAIDASNEKRKPKSRRCQTTKPIDGEENENENNDSDNELGEDQEVLENGEEEGKN
        MET TSS+HQRLLL CAG  SATLL LVA+AE+LASSQF+  N+M AI   N+KRK  S + QT     G ENEN+NNDSDNE G++Q+ LENG E+GKN
Subjt:  METETSSVHQRLLLTCAGGISATLLSLVALAEVLASSQFIDLNKMYAIDASNEKRKPKSRRCQTTKPIDGEENENENNDSDNELGEDQEVLENGEEEGKN

Query:  APTKDGANGGEDASNDNGDGGSENSGEGGDDDEEDNDDGGSDKNNEDNNEDEEDVDEEDAEEDNFEEEDDDDEETLPPPKKRKK
        APTKDGANGGE+ASNDNGDGGSENSG+GG  DE+D DDGGS++N+EDN EDEED DEED EED FE E  DDEETLPPPKKRKK
Subjt:  APTKDGANGGEDASNDNGDGGSENSGEGGDDDEEDNDDGGSDKNNEDNNEDEEDVDEEDAEEDNFEEEDDDDEETLPPPKKRKK

A0A6J1FLT8 uncharacterized protein DDB_G0290685-like isoform X21.2e-4271.74Show/hide
Query:  METETSSVHQRLLLTCAGGISATLLSLVALAEVLASSQFIDLNKMYAIDASNEKRKPKSRRCQTTKPIDGEENENENNDSDNELGEDQEVLENGEEEGKN
        MET TSS+HQRLLL CAG  SATLL LVA+AE+LASSQF+  N+M AI   N+KRK  S + QT     G ENEN+NNDSDNE G++Q+ LENG E+GKN
Subjt:  METETSSVHQRLLLTCAGGISATLLSLVALAEVLASSQFIDLNKMYAIDASNEKRKPKSRRCQTTKPIDGEENENENNDSDNELGEDQEVLENGEEEGKN

Query:  APTKDGANGGEDASNDNGDGGSENSGEGGDDDEEDNDDGGSDKNNEDNNEDEEDVDEEDAEEDNFEEEDDDDEETLPPPKKRKK
        APTKDGANGGE+ASNDNGDGGSENSG+GG  DE+D DDGGS++N+EDN EDEED DEED EED FE E  DDEETLPPPKKRKK
Subjt:  APTKDGANGGEDASNDNGDGGSENSGEGGDDDEEDNDDGGSDKNNEDNNEDEEDVDEEDAEEDNFEEEDDDDEETLPPPKKRKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGACCGAAACTTCTTCTGTTCATCAGCGCTTGCTGCTAACGTGCGCCGGAGGCATTTCGGCGACGTTGCTTAGCCTCGTGGCCCTGGCCGAGGTGCTTGCTTCGTC
TCAGTTCATAGATTTGAATAAGATGTATGCCATTGATGCATCCAACGAAAAAAGGAAACCCAAGTCTAGGAGATGTCAAACGACAAAGCCGATTGATGGAGAAGAAAATG
AAAATGAGAATAACGATAGTGATAACGAACTTGGAGAAGATCAAGAAGTGCTTGAAAATGGAGAGGAAGAAGGTAAAAATGCTCCCACTAAAGATGGTGCTAATGGAGGA
GAAGATGCTAGCAATGATAACGGCGATGGTGGAAGTGAGAATAGTGGTGAGGGTGGTGATGACGACGAAGAAGATAATGATGATGGTGGAAGCGATAAAAACAATGAAGA
TAATAATGAAGATGAGGAAGACGTGGATGAAGAAGATGCCGAGGAAGACAACTTTGAAGAAGAAGACGATGATGATGAAGAAACCCTTCCACCACCAAAGAAGAGAAAGA
AGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGACCGAAACTTCTTCTGTTCATCAGCGCTTGCTGCTAACGTGCGCCGGAGGCATTTCGGCGACGTTGCTTAGCCTCGTGGCCCTGGCCGAGGTGCTTGCTTCGTC
TCAGTTCATAGATTTGAATAAGATGTATGCCATTGATGCATCCAACGAAAAAAGGAAACCCAAGTCTAGGAGATGTCAAACGACAAAGCCGATTGATGGAGAAGAAAATG
AAAATGAGAATAACGATAGTGATAACGAACTTGGAGAAGATCAAGAAGTGCTTGAAAATGGAGAGGAAGAAGGTAAAAATGCTCCCACTAAAGATGGTGCTAATGGAGGA
GAAGATGCTAGCAATGATAACGGCGATGGTGGAAGTGAGAATAGTGGTGAGGGTGGTGATGACGACGAAGAAGATAATGATGATGGTGGAAGCGATAAAAACAATGAAGA
TAATAATGAAGATGAGGAAGACGTGGATGAAGAAGATGCCGAGGAAGACAACTTTGAAGAAGAAGACGATGATGATGAAGAAACCCTTCCACCACCAAAGAAGAGAAAGA
AGTAA
Protein sequenceShow/hide protein sequence
METETSSVHQRLLLTCAGGISATLLSLVALAEVLASSQFIDLNKMYAIDASNEKRKPKSRRCQTTKPIDGEENENENNDSDNELGEDQEVLENGEEEGKNAPTKDGANGG
EDASNDNGDGGSENSGEGGDDDEEDNDDGGSDKNNEDNNEDEEDVDEEDAEEDNFEEEDDDDEETLPPPKKRKK