; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10018680 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10018680
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionclassical arabinogalactan protein 9-like
Genome locationChr04:6795940..6798559
RNA-Seq ExpressionHG10018680
SyntenyHG10018680
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
InterPro domainsIPR044981 - Lysine-rich arabinogalactan protein AGP9/17/18


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571935.1 hypothetical protein SDJN03_28663, partial [Cucurbita argyrosperma subsp. sororia]6.9e-6282.33Show/hide
Query:  MDRQAFLCFALISIAFAVAGAQSPSTPP----------TTSPPATPPPVSAPPPATPPPASPPPATPPPASPPPATPPPATPPPASPPPVSPPPATPPPA
        MD QA  C  LISIAFAVAGAQ PS+PP          TT PPATPPPVSAPPPATPPPA+PPPA+PPPA+PPPA+PPPATPPPASPPP +PPPA+PPPA
Subjt:  MDRQAFLCFALISIAFAVAGAQSPSTPP----------TTSPPATPPPVSAPPPATPPPASPPPATPPPASPPPATPPPATPPPASPPPVSPPPATPPPA

Query:  SPPPASPPPTTPPPASPPPASPPPATPPPATPPPAPLTSPPAAVPAPAPSKKKVKGAPGPSPVSSPPAPSVEAPGPAGPESPTPSQNDNSGVEKVWRKET
        +PPPASPPP TPPPASPPPA+PPPATPPPATPPPAPL SPPAAVPAPAPSKKK+K APGP+PVSSPP PS E PGPAGPESPTPSQNDNSGVEK WRKET
Subjt:  SPPPASPPPTTPPPASPPPASPPPATPPPATPPPAPLTSPPAAVPAPAPSKKKVKGAPGPSPVSSPPAPSVEAPGPAGPESPTPSQNDNSGVEKVWRKET

Query:  MVGSILIGMGYVFMM
        MVGS+LIGMGYV MM
Subjt:  MVGSILIGMGYVFMM

KAG7011623.1 hypothetical protein SDJN02_26529, partial [Cucurbita argyrosperma subsp. argyrosperma]4.6e-5081.87Show/hide
Query:  AGAQSPSTPPTTS------PPATPPPVSAPPPATPPPASPPPATPPPASPPPATPPPATPPPASPPPVSPPPATPPPASPPPASPPPTTPPPASPPPASP
        A  QSP   P  S        ATPPPVSAPPPATPPPA+PPPA+PPPA+PPPA+PPPATPPPASPPP +PPPA+PPPA+PPPASPPP TPPPASPPPA+P
Subjt:  AGAQSPSTPPTTS------PPATPPPVSAPPPATPPPASPPPATPPPASPPPATPPPATPPPASPPPVSPPPATPPPASPPPASPPPTTPPPASPPPASP

Query:  PPATPPPATPPPAPLTSPPAAVPAPAPSKKKVKGAPGPSPVSSPPAPSVEAPGPAGPESPTPSQNDNSGVEKVWRKETMVGSILIGMGYVFMM
        PPATPPPATPPPAPL SPPAAVPAPAPSKKK+K APGP+PVSSPP PS E PGPAGPESPTPSQNDNSGVEK WRKETMVGS+LIGMGYV MM
Subjt:  PPATPPPATPPPAPLTSPPAAVPAPAPSKKKVKGAPGPSPVSSPPAPSVEAPGPAGPESPTPSQNDNSGVEKVWRKETMVGSILIGMGYVFMM

XP_008455018.1 PREDICTED: classical arabinogalactan protein 9 [Cucumis melo]1.4e-5181.04Show/hide
Query:  MDRQAF-LCFALISIAFAVAGAQSPSTPPTTSPPATPPPVSAPPPA-TPPP-ASPPPATPPPASPPPATPPPATPPPASPPPVSPPPATPPPASPPPASP
        MD +AF LCF  ISIAFA+AGAQSPS+PPT +P  +PP  SAPPPA TPPP +SPPPA  P   PP ATPPPA+PPPASPPP SPPPATPPPASPPPASP
Subjt:  MDRQAF-LCFALISIAFAVAGAQSPSTPPTTSPPATPPPVSAPPPA-TPPP-ASPPPATPPPASPPPATPPPATPPPASPPPVSPPPATPPPASPPPASP

Query:  PPTTPPPASPPPASPPPATPPPATPPPAPLTSPPAAVPAPAPSKKKVK-GAPGPSPVSSPPAPSVEAPGPAGP-ESPTPSQNDNSGVEKVWRKETMVGSI
        PP +PPPASPPPASPPPA+PPPA PPPAPL SPP AVPAPAPSKKKVK  APGP+PVSSPPAPSVEAPGPAGP +SPTPSQNDNSGVEKVWRKE+MVGSI
Subjt:  PPTTPPPASPPPASPPPATPPPATPPPAPLTSPPAAVPAPAPSKKKVK-GAPGPSPVSSPPAPSVEAPGPAGP-ESPTPSQNDNSGVEKVWRKETMVGSI

Query:  LIGMGYVFMMM
        +IGMGYVF+M+
Subjt:  LIGMGYVFMMM

XP_022952421.1 classical arabinogalactan protein 9-like [Cucurbita moschata]1.2e-5880.37Show/hide
Query:  MDRQAFLCFALISIAFAVAGAQSPSTPP---------TTSPPATPPPVSAPPPATPPPASPPPATPPPASPPPATPPPATPPPASPPPVSPPPATPPPAS
        MD QA  CF LI +AFAVAGAQ PS+PP         T  PPATPPPVSAPPPAT      PPATPPPASPPPATPPPA+PPPA+PPP SPPPA+PPPA+
Subjt:  MDRQAFLCFALISIAFAVAGAQSPSTPP---------TTSPPATPPPVSAPPPATPPPASPPPATPPPASPPPATPPPATPPPASPPPVSPPPATPPPAS

Query:  PPPASPPPTTPPPASPPPASPPPATPPPATPPPAPLTSPPAAVPAPAPSKKKVKGAPGPSPVSSPPAPSVEAPGPAGPESPTPSQNDNSGVEKVWRKETM
        PPPASPPP TPPPASPPPA+PPPATPPPATPPPAPL SPPAAVPAPAPSKKK+K APGP+PVSSPP PS E PGPAGPESPTPSQNDNSGVEK WRKETM
Subjt:  PPPASPPPTTPPPASPPPASPPPATPPPATPPPAPLTSPPAAVPAPAPSKKKVKGAPGPSPVSSPPAPSVEAPGPAGPESPTPSQNDNSGVEKVWRKETM

Query:  VGSILIGMGYVFMM
        VGS+LIGMGYV MM
Subjt:  VGSILIGMGYVFMM

XP_023553858.1 classical arabinogalactan protein 9-like [Cucurbita pepo subsp. pepo]3.0e-5783.01Show/hide
Query:  MDRQAFLCFALISIAFAVAGAQSPSTPPTTSPPATPPPVSAPPPATPPP-ASPPPATPPPASPPPATPPPATPPPASPPPVSPPPATPPPASPPPASPPP
        MD QA  CF LISIAFAVAGAQ PS+PPT +  A P   +APPPATPPP +SPPPATPPPASPPPATPPPA+PPPA+PPP SPPPATPPPASPPPA+PPP
Subjt:  MDRQAFLCFALISIAFAVAGAQSPSTPPTTSPPATPPPVSAPPPATPPP-ASPPPATPPPASPPPATPPPATPPPASPPPVSPPPATPPPASPPPASPPP

Query:  TTPPPASPPPASPPPATPPPATPPPAPLTSPPAAVPAPAPSKKKVKGAPGPSPVSSPPAPSVEAPGPAGPESPTPSQNDNSGVEKVWRKETMVGSILIGM
         +PPPA+PPPASPPPATPPPATPPP PL SPPAAVPAPAPSKKK+K APGP+PVSSPP PS E PGPAGPESPTPSQNDNSGVEK WRKETMVGS+LIGM
Subjt:  TTPPPASPPPASPPPATPPPATPPPAPLTSPPAAVPAPAPSKKKVKGAPGPSPVSSPPAPSVEAPGPAGPESPTPSQNDNSGVEKVWRKETMVGSILIGM

Query:  GYVFMM
        GYV MM
Subjt:  GYVFMM

TrEMBL top hitse value%identityAlignment
A0A0A0K6D8 Uncharacterized protein2.7e-4876.44Show/hide
Query:  MDRQAFLCFALISIAFAVAGAQSPSTPPTTSPPATPPPVSAPPPATPPPASPPPATPPPASPPPATPPPATPPPASPPPVSPPPATPPPASPPPASPPPT
        MD +A LCF LISIAF +A AQSPS+PPT +P  +PP  S PPP + P   PP ATPPPASPPPA+PPPA+PPPA+PPP SPPPA+PPPASPPPASPPP 
Subjt:  MDRQAFLCFALISIAFAVAGAQSPSTPPTTSPPATPPPVSAPPPATPPPASPPPATPPPASPPPATPPPATPPPASPPPVSPPPATPPPASPPPASPPPT

Query:  TPPPASPPPASPPPATPPPATPPPAPLTSPPAAVPAPAPSKKKVK-GAPGPSPVSSPPAPSVEAPGPAGP-ESPTPSQNDNSGVEKVWRKETMVGSILIG
        TPPPASP         PPPATPPPAPL SPP AVPAPAPSKKKVK  AP PSPVSSPPAPSVEAPGPAGP +SPTPSQNDNSGVEKVWRKE+MVGSI+IG
Subjt:  TPPPASPPPASPPPATPPPATPPPAPLTSPPAAVPAPAPSKKKVK-GAPGPSPVSSPPAPSVEAPGPAGP-ESPTPSQNDNSGVEKVWRKETMVGSILIG

Query:  MGYVFMMM
        MGYVF+M+
Subjt:  MGYVFMMM

A0A1S3BZW9 classical arabinogalactan protein 96.9e-5281.04Show/hide
Query:  MDRQAF-LCFALISIAFAVAGAQSPSTPPTTSPPATPPPVSAPPPA-TPPP-ASPPPATPPPASPPPATPPPATPPPASPPPVSPPPATPPPASPPPASP
        MD +AF LCF  ISIAFA+AGAQSPS+PPT +P  +PP  SAPPPA TPPP +SPPPA  P   PP ATPPPA+PPPASPPP SPPPATPPPASPPPASP
Subjt:  MDRQAF-LCFALISIAFAVAGAQSPSTPPTTSPPATPPPVSAPPPA-TPPP-ASPPPATPPPASPPPATPPPATPPPASPPPVSPPPATPPPASPPPASP

Query:  PPTTPPPASPPPASPPPATPPPATPPPAPLTSPPAAVPAPAPSKKKVK-GAPGPSPVSSPPAPSVEAPGPAGP-ESPTPSQNDNSGVEKVWRKETMVGSI
        PP +PPPASPPPASPPPA+PPPA PPPAPL SPP AVPAPAPSKKKVK  APGP+PVSSPPAPSVEAPGPAGP +SPTPSQNDNSGVEKVWRKE+MVGSI
Subjt:  PPTTPPPASPPPASPPPATPPPATPPPAPLTSPPAAVPAPAPSKKKVK-GAPGPSPVSSPPAPSVEAPGPAGP-ESPTPSQNDNSGVEKVWRKETMVGSI

Query:  LIGMGYVFMMM
        +IGMGYVF+M+
Subjt:  LIGMGYVFMMM

A0A5A7SJX5 Classical arabinogalactan protein 96.9e-5281.04Show/hide
Query:  MDRQAF-LCFALISIAFAVAGAQSPSTPPTTSPPATPPPVSAPPPA-TPPP-ASPPPATPPPASPPPATPPPATPPPASPPPVSPPPATPPPASPPPASP
        MD +AF LCF  ISIAFA+AGAQSPS+PPT +P  +PP  SAPPPA TPPP +SPPPA  P   PP ATPPPA+PPPASPPP SPPPATPPPASPPPASP
Subjt:  MDRQAF-LCFALISIAFAVAGAQSPSTPPTTSPPATPPPVSAPPPA-TPPP-ASPPPATPPPASPPPATPPPATPPPASPPPVSPPPATPPPASPPPASP

Query:  PPTTPPPASPPPASPPPATPPPATPPPAPLTSPPAAVPAPAPSKKKVK-GAPGPSPVSSPPAPSVEAPGPAGP-ESPTPSQNDNSGVEKVWRKETMVGSI
        PP +PPPASPPPASPPPA+PPPA PPPAPL SPP AVPAPAPSKKKVK  APGP+PVSSPPAPSVEAPGPAGP +SPTPSQNDNSGVEKVWRKE+MVGSI
Subjt:  PPTTPPPASPPPASPPPATPPPATPPPAPLTSPPAAVPAPAPSKKKVK-GAPGPSPVSSPPAPSVEAPGPAGP-ESPTPSQNDNSGVEKVWRKETMVGSI

Query:  LIGMGYVFMMM
        +IGMGYVF+M+
Subjt:  LIGMGYVFMMM

A0A6J1GK65 classical arabinogalactan protein 9-like5.9e-5980.37Show/hide
Query:  MDRQAFLCFALISIAFAVAGAQSPSTPP---------TTSPPATPPPVSAPPPATPPPASPPPATPPPASPPPATPPPATPPPASPPPVSPPPATPPPAS
        MD QA  CF LI +AFAVAGAQ PS+PP         T  PPATPPPVSAPPPAT      PPATPPPASPPPATPPPA+PPPA+PPP SPPPA+PPPA+
Subjt:  MDRQAFLCFALISIAFAVAGAQSPSTPP---------TTSPPATPPPVSAPPPATPPPASPPPATPPPASPPPATPPPATPPPASPPPVSPPPATPPPAS

Query:  PPPASPPPTTPPPASPPPASPPPATPPPATPPPAPLTSPPAAVPAPAPSKKKVKGAPGPSPVSSPPAPSVEAPGPAGPESPTPSQNDNSGVEKVWRKETM
        PPPASPPP TPPPASPPPA+PPPATPPPATPPPAPL SPPAAVPAPAPSKKK+K APGP+PVSSPP PS E PGPAGPESPTPSQNDNSGVEK WRKETM
Subjt:  PPPASPPPTTPPPASPPPASPPPATPPPATPPPAPLTSPPAAVPAPAPSKKKVKGAPGPSPVSSPPAPSVEAPGPAGPESPTPSQNDNSGVEKVWRKETM

Query:  VGSILIGMGYVFMM
        VGS+LIGMGYV MM
Subjt:  VGSILIGMGYVFMM

A0A6J1I8J9 classical arabinogalactan protein 9-like5.5e-3363.84Show/hide
Query:  MDRQAFLCFALISIAFAVAGAQSPSTPPTTSPPATPP-------------------PVSAPPPATPPPASPPPATPPPASPPPATPPPATPPPASPPPVS
        MD QA  CF LISIAFAVAGAQ PS+PPT +P   PP                                                   ATPPPASPPP +
Subjt:  MDRQAFLCFALISIAFAVAGAQSPSTPPTTSPPATPP-------------------PVSAPPPATPPPASPPPATPPPASPPPATPPPATPPPASPPPVS

Query:  PPPATPPPASPPPASPPPTTPPPASPPPASPPPATPPPATPPPAPLTSPPAAVPAPAPSKKKVKGAPGPSPVSSPPAPSVEAPGPAGPESPTPSQNDNSG
        PPPA+PPPA+PPPASPPP TPPPASPPPA+PPPATPPPATPPPAPL SPPAAVPAPAPSKKK+K APG +PVSSPP PS E PGPAGPESPTPSQNDNSG
Subjt:  PPPATPPPASPPPASPPPTTPPPASPPPASPPPATPPPATPPPAPLTSPPAAVPAPAPSKKKVKGAPGPSPVSSPPAPSVEAPGPAGPESPTPSQNDNSG

Query:  VEKVWRKETMVGSILIGMGYVFMM
        VEK WRKET++GS+LIGMGYV MM
Subjt:  VEKVWRKETMVGSILIGMGYVFMM

SwissProt top hitse value%identityAlignment
Q9C5S0 Classical arabinogalactan protein 91.4e-0954.11Show/hide
Query:  AFLCFALISIAFAVAGAQSPSTPPTTSPPATPPPVSAPPPATPPPASPPPATPPPASPPPATPPPATPPPASPPPVSPPPATPPPASPPPASPPPTTPPP
        A +C  LI+    V G Q+P++PPT + PA P P + PP ATPPP S PP  P   SPPP T     PPPA+PP   PP ++PPPASPPPA+PPP   PP
Subjt:  AFLCFALISIAFAVAGAQSPSTPPTTSPPATPPPVSAPPPATPPPASPPPATPPPASPPPATPPPATPPPASPPPVSPPPATPPPASPPPASPPPTTPPP

Query:  ASPPPASPPPATPPP-ATPPPAPLTSPPAAVPAPAPSKKKVKGAPGPSPVSSPPAPSVEAPGPAGPE-SPTPSQ---NDNSGVEKVWRKETMVGSILIGM
          PP ASPPPATPPP ATPPPAPL SPPA VPAPAP+ K    +P PSP SSPP PS +APGP+    SP PS    ND +G  K      MV S++ G 
Subjt:  ASPPPASPPPATPPP-ATPPPAPLTSPPAAVPAPAPSKKKVKGAPGPSPVSSPPAPSVEAPGPAGPE-SPTPSQ---NDNSGVEKVWRKETMVGSILIGM

Query:  GYVFMMM
          V+ M+
Subjt:  GYVFMMM

Arabidopsis top hitse value%identityAlignment
AT2G14890.1 arabinogalactan protein 91.0e-1054.11Show/hide
Query:  AFLCFALISIAFAVAGAQSPSTPPTTSPPATPPPVSAPPPATPPPASPPPATPPPASPPPATPPPATPPPASPPPVSPPPATPPPASPPPASPPPTTPPP
        A +C  LI+    V G Q+P++PPT + PA P P + PP ATPPP S PP  P   SPPP T     PPPA+PP   PP ++PPPASPPPA+PPP   PP
Subjt:  AFLCFALISIAFAVAGAQSPSTPPTTSPPATPPPVSAPPPATPPPASPPPATPPPASPPPATPPPATPPPASPPPVSPPPATPPPASPPPASPPPTTPPP

Query:  ASPPPASPPPATPPP-ATPPPAPLTSPPAAVPAPAPSKKKVKGAPGPSPVSSPPAPSVEAPGPAGPE-SPTPSQ---NDNSGVEKVWRKETMVGSILIGM
          PP ASPPPATPPP ATPPPAPL SPPA VPAPAP+ K    +P PSP SSPP PS +APGP+    SP PS    ND +G  K      MV S++ G 
Subjt:  ASPPPASPPPATPPP-ATPPPAPLTSPPAAVPAPAPSKKKVKGAPGPSPVSSPPAPSVEAPGPAGPE-SPTPSQ---NDNSGVEKVWRKETMVGSILIGM

Query:  GYVFMMM
          V+ M+
Subjt:  GYVFMMM

AT2G14890.2 arabinogalactan protein 98.5e-1058.52Show/hide
Query:  AFLCFALISIAFAVAGAQSPSTPPTTSPPATPPPVSAPPPATPPPASPPPATPPPASPPPATPPPATPPPASPPPVSPPPATPPPASPPPASPPPTTPPP
        A +C  LI+    V G Q+P++PPT + PA P P + PP ATPPP S PP  P   SPPP T     PPPA+PP   PP ++PPPASPPPA+PPP   PP
Subjt:  AFLCFALISIAFAVAGAQSPSTPPTTSPPATPPPVSAPPPATPPPASPPPATPPPASPPPATPPPATPPPASPPPVSPPPATPPPASPPPASPPPTTPPP

Query:  ASPPPASPPPATPPP-ATPPPAPLTSPPAAVPAPAPSKKKVKGAPGPSPVSSPPAPSVEAPGPAGPE-SPTPSQND
          PP ASPPPATPPP ATPPPAPL SPPA VPAPAP+ K    +P PSP SSPP PS +APGP+    SP PS  D
Subjt:  ASPPPASPPPATPPP-ATPPPAPLTSPPAAVPAPAPSKKKVKGAPGPSPVSSPPAPSVEAPGPAGPE-SPTPSQND


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCGTCAAGCTTTCTTGTGTTTCGCTTTGATCTCCATTGCCTTCGCCGTTGCCGGAGCTCAGTCTCCCTCCACTCCTCCCACCACCTCTCCTCCCGCCACTCCTCC
CCCTGTTTCAGCTCCCCCTCCTGCCACTCCCCCTCCGGCATCCCCACCTCCCGCCACTCCCCCTCCGGCATCCCCACCTCCGGCCACTCCTCCTCCGGCAACTCCACCTC
CGGCTAGTCCCCCTCCGGTTTCCCCACCACCTGCGACTCCTCCTCCGGCAAGTCCCCCTCCGGCTTCCCCACCACCTACGACTCCTCCTCCGGCTTCCCCACCTCCGGCT
TCTCCGCCACCGGCGACTCCTCCGCCTGCAACTCCACCACCTGCACCATTGACATCCCCACCGGCGGCGGTTCCAGCTCCTGCACCCAGCAAGAAGAAGGTGAAGGGGGC
TCCGGGTCCGTCGCCAGTTTCGAGCCCGCCGGCGCCGTCAGTGGAGGCTCCAGGACCTGCTGGCCCTGAATCTCCGACCCCATCTCAGAACGACAATAGCGGAGTCGAGA
AAGTTTGGAGAAAGGAGACTATGGTGGGGAGCATATTGATTGGAATGGGATATGTATTTATGATGATGCTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATCGTCAAGCTTTCTTGTGTTTCGCTTTGATCTCCATTGCCTTCGCCGTTGCCGGAGCTCAGTCTCCCTCCACTCCTCCCACCACCTCTCCTCCCGCCACTCCTCC
CCCTGTTTCAGCTCCCCCTCCTGCCACTCCCCCTCCGGCATCCCCACCTCCCGCCACTCCCCCTCCGGCATCCCCACCTCCGGCCACTCCTCCTCCGGCAACTCCACCTC
CGGCTAGTCCCCCTCCGGTTTCCCCACCACCTGCGACTCCTCCTCCGGCAAGTCCCCCTCCGGCTTCCCCACCACCTACGACTCCTCCTCCGGCTTCCCCACCTCCGGCT
TCTCCGCCACCGGCGACTCCTCCGCCTGCAACTCCACCACCTGCACCATTGACATCCCCACCGGCGGCGGTTCCAGCTCCTGCACCCAGCAAGAAGAAGGTGAAGGGGGC
TCCGGGTCCGTCGCCAGTTTCGAGCCCGCCGGCGCCGTCAGTGGAGGCTCCAGGACCTGCTGGCCCTGAATCTCCGACCCCATCTCAGAACGACAATAGCGGAGTCGAGA
AAGTTTGGAGAAAGGAGACTATGGTGGGGAGCATATTGATTGGAATGGGATATGTATTTATGATGATGCTTTAG
Protein sequenceShow/hide protein sequence
MDRQAFLCFALISIAFAVAGAQSPSTPPTTSPPATPPPVSAPPPATPPPASPPPATPPPASPPPATPPPATPPPASPPPVSPPPATPPPASPPPASPPPTTPPPASPPPA
SPPPATPPPATPPPAPLTSPPAAVPAPAPSKKKVKGAPGPSPVSSPPAPSVEAPGPAGPESPTPSQNDNSGVEKVWRKETMVGSILIGMGYVFMMML