; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10018706 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10018706
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionEndo-1,4-beta-xylanase 4
Genome locationChr04:7156479..7158206
RNA-Seq ExpressionHG10018706
SyntenyHG10018706
Gene Ontology termsGO:0045493 - xylan catabolic process (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds (molecular function)
InterPro domainsIPR017853 - Glycoside hydrolase superfamily
IPR044846 - Glycoside hydrolase family 10


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571918.1 Endo-1,4-beta-xylanase 5-like protein, partial [Cucurbita argyrosperma subsp. sororia]1.7e-3769.91Show/hide
Query:  EESTRRSASGLFYNWAMKVNQSVTLFLYEFNTIEYSGDAISSPARYFQKLDAIRRFLGNSGGRFVIGLESHFGLSPNIPYMRSTINTLGSVGIPIWLTEV
        E     +ASG+FYNWAMK + S+ LF+ ++NTIEYSGDA SSPA+Y QKLD+IRR+ GNSGGRF IGLESHFG SPNIPYMRS I+TLGS G+PIWLTEV
Subjt:  EESTRRSASGLFYNWAMKVNQSVTLFLYEFNTIEYSGDAISSPARYFQKLDAIRRFLGNSGGRFVIGLESHFGLSPNIPYMRSTINTLGSVGIPIWLTEV

Query:  DVYNLQNQVQFLK
        DV N  NQ Q L+
Subjt:  DVYNLQNQVQFLK

KAG7011604.1 rsgI6, partial [Cucurbita argyrosperma subsp. argyrosperma]3.0e-3771.56Show/hide
Query:  EESTRRSASGLFYNWAMKVNQSVTLFLYEFNTIEYSGDAISSPARYFQKLDAIRRFLGNSGGRFVIGLESHFGLSPNIPYMRSTINTLGSVGIPIWLTEV
        E     +ASG+FYNWAMK + S+ LF+ ++NTIEYSGDA SSPA+Y QKLD+IRR+ GNSGGRF IGLESHFG SPNIPYMRS I+TLGS G+PIWLTEV
Subjt:  EESTRRSASGLFYNWAMKVNQSVTLFLYEFNTIEYSGDAISSPARYFQKLDAIRRFLGNSGGRFVIGLESHFGLSPNIPYMRSTINTLGSVGIPIWLTEV

Query:  DVYNLQNQV
        DV N  NQV
Subjt:  DVYNLQNQV

XP_022952795.1 uncharacterized protein LOC111455386 [Cucurbita moschata]1.7e-3769.91Show/hide
Query:  EESTRRSASGLFYNWAMKVNQSVTLFLYEFNTIEYSGDAISSPARYFQKLDAIRRFLGNSGGRFVIGLESHFGLSPNIPYMRSTINTLGSVGIPIWLTEV
        E     +ASG+FYNWAMK + S+ LF+ ++NTIEYSGDA SSPA+Y QKLD+IRR+ GNSGGRF IGLESHFG SPNIPYMRS I+TLGS G+PIWLTEV
Subjt:  EESTRRSASGLFYNWAMKVNQSVTLFLYEFNTIEYSGDAISSPARYFQKLDAIRRFLGNSGGRFVIGLESHFGLSPNIPYMRSTINTLGSVGIPIWLTEV

Query:  DVYNLQNQVQFLK
        DV N  NQ Q L+
Subjt:  DVYNLQNQVQFLK

XP_023553798.1 uncharacterized protein LOC111811263 [Cucurbita pepo subsp. pepo]1.3e-3769.91Show/hide
Query:  EESTRRSASGLFYNWAMKVNQSVTLFLYEFNTIEYSGDAISSPARYFQKLDAIRRFLGNSGGRFVIGLESHFGLSPNIPYMRSTINTLGSVGIPIWLTEV
        E     +ASG+FYNWAMK + S+ LF+ E+NTIEYSGDA SSPA+Y QKLD+IRR+ GNSGGRF IGLESHFG SPNIPYMRS I+TLGS G+PIWLTEV
Subjt:  EESTRRSASGLFYNWAMKVNQSVTLFLYEFNTIEYSGDAISSPARYFQKLDAIRRFLGNSGGRFVIGLESHFGLSPNIPYMRSTINTLGSVGIPIWLTEV

Query:  DVYNLQNQVQFLK
        DV N  NQ   L+
Subjt:  DVYNLQNQVQFLK

XP_038887131.1 endo-1,4-beta-xylanase 5-like [Benincasa hispida]1.4e-3979.25Show/hide
Query:  ASGLFYNWAMKVNQSVTLFLYEFNTIEYSGDAISSPARYFQKLDAIRRFLGNSGGRFVIGLESHFGLSPNIPYMRSTINTLGSVGIPIWLTEVDVYNLQN
        ASGLFYNWAMK +QS+ LFL EFNTIEYSGDA SSPARY QKLDAIRRF GNSGGRF IGLESHFG +PNIPYMRS I+TLGS G+PIWLTEVDV N  N
Subjt:  ASGLFYNWAMKVNQSVTLFLYEFNTIEYSGDAISSPARYFQKLDAIRRFLGNSGGRFVIGLESHFGLSPNIPYMRSTINTLGSVGIPIWLTEVDVYNLQN

Query:  QVQFLK
        Q   L+
Subjt:  QVQFLK

TrEMBL top hitse value%identityAlignment
A0A0A0K6B7 GH10 domain-containing protein7.1e-3775.47Show/hide
Query:  ASGLFYNWAMKVNQSVTLFLYEFNTIEYSGDAISSPARYFQKLDAIRRFLGNSGGRFVIGLESHFGLSPNIPYMRSTINTLGSVGIPIWLTEVDVYNLQN
        ASGLFYNWAMK +QS+ LFL EFNTIE SGDA SSPARY QKLD IR+F GN GGRF IGLESHFG SPNI YMRS I+TLGS G+PIWLTEVDV N  N
Subjt:  ASGLFYNWAMKVNQSVTLFLYEFNTIEYSGDAISSPARYFQKLDAIRRFLGNSGGRFVIGLESHFGLSPNIPYMRSTINTLGSVGIPIWLTEVDVYNLQN

Query:  QVQFLK
        Q   L+
Subjt:  QVQFLK

A0A1S3C1U4 uncharacterized protein LOC1034956733.5e-3674.53Show/hide
Query:  ASGLFYNWAMKVNQSVTLFLYEFNTIEYSGDAISSPARYFQKLDAIRRFLGNSGGRFVIGLESHFGLSPNIPYMRSTINTLGSVGIPIWLTEVDVYNLQN
        ASGLFYNWAMK +QS+ LFL EFNTIE SGDA SSPARY QKLDAIR+F GNS  RF IGLESHFG SPN+ YMRS I+TLGS G+PIWLTEVDV N  N
Subjt:  ASGLFYNWAMKVNQSVTLFLYEFNTIEYSGDAISSPARYFQKLDAIRRFLGNSGGRFVIGLESHFGLSPNIPYMRSTINTLGSVGIPIWLTEVDVYNLQN

Query:  QVQFLK
        Q   L+
Subjt:  QVQFLK

A0A5D3C4I2 Endoxylanase3.5e-3674.53Show/hide
Query:  ASGLFYNWAMKVNQSVTLFLYEFNTIEYSGDAISSPARYFQKLDAIRRFLGNSGGRFVIGLESHFGLSPNIPYMRSTINTLGSVGIPIWLTEVDVYNLQN
        ASGLFYNWAMK +QS+ LFL EFNTIE SGDA SSPARY QKLDAIR+F GNS  RF IGLESHFG SPN+ YMRS I+TLGS G+PIWLTEVDV N  N
Subjt:  ASGLFYNWAMKVNQSVTLFLYEFNTIEYSGDAISSPARYFQKLDAIRRFLGNSGGRFVIGLESHFGLSPNIPYMRSTINTLGSVGIPIWLTEVDVYNLQN

Query:  QVQFLK
        Q   L+
Subjt:  QVQFLK

A0A6J1GMR3 uncharacterized protein LOC1114553868.4e-3869.91Show/hide
Query:  EESTRRSASGLFYNWAMKVNQSVTLFLYEFNTIEYSGDAISSPARYFQKLDAIRRFLGNSGGRFVIGLESHFGLSPNIPYMRSTINTLGSVGIPIWLTEV
        E     +ASG+FYNWAMK + S+ LF+ ++NTIEYSGDA SSPA+Y QKLD+IRR+ GNSGGRF IGLESHFG SPNIPYMRS I+TLGS G+PIWLTEV
Subjt:  EESTRRSASGLFYNWAMKVNQSVTLFLYEFNTIEYSGDAISSPARYFQKLDAIRRFLGNSGGRFVIGLESHFGLSPNIPYMRSTINTLGSVGIPIWLTEV

Query:  DVYNLQNQVQFLK
        DV N  NQ Q L+
Subjt:  DVYNLQNQVQFLK

A0A6J1I4U7 uncharacterized protein LOC1114710112.1e-3668.14Show/hide
Query:  EESTRRSASGLFYNWAMKVNQSVTLFLYEFNTIEYSGDAISSPARYFQKLDAIRRFLGNSGGRFVIGLESHFGLSPNIPYMRSTINTLGSVGIPIWLTEV
        E     +ASG+FYNWAMK + S+ LF+ E+NTIE SGDA SSPA+Y QKLD+IR + GNSGGRF IGLESHFG SPNIPYMRS I+TLGS G+PIWLTE+
Subjt:  EESTRRSASGLFYNWAMKVNQSVTLFLYEFNTIEYSGDAISSPARYFQKLDAIRRFLGNSGGRFVIGLESHFGLSPNIPYMRSTINTLGSVGIPIWLTEV

Query:  DVYNLQNQVQFLK
        DV N  NQ Q L+
Subjt:  DVYNLQNQVQFLK

SwissProt top hitse value%identityAlignment
A0A1P8AWH8 Endo-1,4-beta-xylanase 13.1e-0530.61Show/hide
Query:  YNWAMKVNQSVTLFLYEFNTIEYSGDAISSPARYFQKLDAIRRFLGNSGGRFVIGLESHFGLSPNIPYMRSTINTLGSVGIPIWLTEVDVYNLQNQVQ
        +  A +++ S TLF+ +++ IE   D  S P +Y +++  ++      GG   IG++ H   SP  P + S ++ LG +G+PIW TE+DV ++   ++
Subjt:  YNWAMKVNQSVTLFLYEFNTIEYSGDAISSPARYFQKLDAIRRFLGNSGGRFVIGLESHFGLSPNIPYMRSTINTLGSVGIPIWLTEVDVYNLQNQVQ

A0A1P8B8F8 Endo-1,4-beta-xylanase 52.4e-1840.35Show/hide
Query:  EESTRRSASGLFYNWAMKVNQSVTLFLYEFNTIEYSGDAISSPARYFQKLDAIRRFLGNSGGRFVIGLESHF-GLSPNIPYMRSTINTLGSVGIPIWLTE
        E+    +AS  FYN A K++  VT+F+ E+NTIE   +  ++P +  +K++ I  + GN   +  IG + HF    PN+ YMRS ++TLGS+G+PIWLTE
Subjt:  EESTRRSASGLFYNWAMKVNQSVTLFLYEFNTIEYSGDAISSPARYFQKLDAIRRFLGNSGGRFVIGLESHF-GLSPNIPYMRSTINTLGSVGIPIWLTE

Query:  VDVYNLQNQVQFLK
        VD+    NQ  +++
Subjt:  VDVYNLQNQVQFLK

O80596 Endo-1,4-beta-xylanase 28.2e-0631.63Show/hide
Query:  YNWAMKVNQSVTLFLYEFNTIEYSGDAISSPARYFQKLDAIRRFLGNSGGRFVIGLESHFGLSPNIPYMRSTINTLGSVGIPIWLTEVDVYNLQNQVQ
        +  A +++   TLFL E++ IE   D+ SSP +Y + +  +++     GG   IG++ H   SP    +RS ++ L ++G+PIW TE+DV +    ++
Subjt:  YNWAMKVNQSVTLFLYEFNTIEYSGDAISSPARYFQKLDAIRRFLGNSGGRFVIGLESHFGLSPNIPYMRSTINTLGSVGIPIWLTEVDVYNLQNQVQ

Q680B7 Endo-1,4-beta-xylanase 44.9e-1940.74Show/hide
Query:  SASGLFYNWAMKVNQSVTLFLYEFNTIEYSGDAISSPARYFQKLDAIRRFLGNSGGRFVIGLESHFG-LSPNIPYMRSTINTLGSVGIPIWLTEVDVYNL
        +AS + Y+ A K++  + LFL EFNT+EY  D + SP    +K+  I  F GN+  +  IG + HF  + PN+ YMR  ++TLGS+  P+WLTEVD++  
Subjt:  SASGLFYNWAMKVNQSVTLFLYEFNTIEYSGDAISSPARYFQKLDAIRRFLGNSGGRFVIGLESHFG-LSPNIPYMRSTINTLGSVGIPIWLTEVDVYNL

Query:  QNQVQFLK
         +QV++++
Subjt:  QNQVQFLK

Q84WT5 Endo-1,4-beta-xylanase 5-like1.1e-1840.35Show/hide
Query:  EESTRRSASGLFYNWAMKVNQSVTLFLYEFNTIEYSGDAISSPARYFQKLDAIRRFLGNSGGRFVIGLESHFG-LSPNIPYMRSTINTLGSVGIPIWLTE
        E+    +AS  FYN A K++  V LF+ E+NTIE + +  ++P +  + ++ I  + GN   +  IG + HFG   PN+ Y+RS ++TLGS+G+PIWLTE
Subjt:  EESTRRSASGLFYNWAMKVNQSVTLFLYEFNTIEYSGDAISSPARYFQKLDAIRRFLGNSGGRFVIGLESHFG-LSPNIPYMRSTINTLGSVGIPIWLTE

Query:  VDVYNLQNQVQFLK
        VD+    NQ Q+++
Subjt:  VDVYNLQNQVQFLK

Arabidopsis top hitse value%identityAlignment
AT2G14690.1 Glycosyl hydrolase superfamily protein3.5e-2040.74Show/hide
Query:  SASGLFYNWAMKVNQSVTLFLYEFNTIEYSGDAISSPARYFQKLDAIRRFLGNSGGRFVIGLESHFG-LSPNIPYMRSTINTLGSVGIPIWLTEVDVYNL
        +AS + Y+ A K++  + LFL EFNT+EY  D + SP    +K+  I  F GN+  +  IG + HF  + PN+ YMR  ++TLGS+  P+WLTEVD++  
Subjt:  SASGLFYNWAMKVNQSVTLFLYEFNTIEYSGDAISSPARYFQKLDAIRRFLGNSGGRFVIGLESHFG-LSPNIPYMRSTINTLGSVGIPIWLTEVDVYNL

Query:  QNQVQFLK
         +QV++++
Subjt:  QNQVQFLK

AT4G33810.1 Glycosyl hydrolase superfamily protein1.7e-1940.35Show/hide
Query:  EESTRRSASGLFYNWAMKVNQSVTLFLYEFNTIEYSGDAISSPARYFQKLDAIRRFLGNSGGRFVIGLESHF-GLSPNIPYMRSTINTLGSVGIPIWLTE
        E+    +AS  FYN A K++  VT+F+ E+NTIE   +  ++P +  +K++ I  + GN   +  IG + HF    PN+ YMRS ++TLGS+G+PIWLTE
Subjt:  EESTRRSASGLFYNWAMKVNQSVTLFLYEFNTIEYSGDAISSPARYFQKLDAIRRFLGNSGGRFVIGLESHF-GLSPNIPYMRSTINTLGSVGIPIWLTE

Query:  VDVYNLQNQVQFLK
        VD+    NQ  +++
Subjt:  VDVYNLQNQVQFLK

AT4G33820.1 Glycosyl hydrolase superfamily protein7.8e-2040.35Show/hide
Query:  EESTRRSASGLFYNWAMKVNQSVTLFLYEFNTIEYSGDAISSPARYFQKLDAIRRFLGNSGGRFVIGLESHFG-LSPNIPYMRSTINTLGSVGIPIWLTE
        E+    +AS  FYN A K++  V LF+ E+NTIE + +  ++P +  + ++ I  + GN   +  IG + HFG   PN+ Y+RS ++TLGS+G+PIWLTE
Subjt:  EESTRRSASGLFYNWAMKVNQSVTLFLYEFNTIEYSGDAISSPARYFQKLDAIRRFLGNSGGRFVIGLESHFG-LSPNIPYMRSTINTLGSVGIPIWLTE

Query:  VDVYNLQNQVQFLK
        VD+    NQ Q+++
Subjt:  VDVYNLQNQVQFLK

AT4G33830.1 Glycosyl hydrolase family 10 protein1.2e-1745.83Show/hide
Query:  SASGLFYNWAMKVNQSVTLFLYEFNTIEYSGDAISSPARYFQKLDAIRRFLGNSGGRFVIGLESHFGLSPNIPYMRSTINTLGSVGIPIWLTEVDV
        +AS   +  A  ++ S T+F+ EF T+E   D  +SPA+Y +KL  ++           IGLESHF  +PNIPYMRS ++TLG+ G+PIWLTE+DV
Subjt:  SASGLFYNWAMKVNQSVTLFLYEFNTIEYSGDAISSPARYFQKLDAIRRFLGNSGGRFVIGLESHFGLSPNIPYMRSTINTLGSVGIPIWLTEVDV

AT4G33860.1 Glycosyl hydrolase family 10 protein1.9e-1850Show/hide
Query:  EESTRRSASGLFYNWAMKVNQSVTLFLYEFNTIEYSGDAISSPARYFQKLDAIR--RFLGNSGGRFVIGLESHFGLSPNIPYMRSTINTLGSVGIPIWLT
        E+     AS   +  A   + + T+F+ E+NT+E S D+ SS ARY QKL  IR  R  GN      IGLESHF  +PNIPYMRS ++TL + G+PIWLT
Subjt:  EESTRRSASGLFYNWAMKVNQSVTLFLYEFNTIEYSGDAISSPARYFQKLDAIR--RFLGNSGGRFVIGLESHFGLSPNIPYMRSTINTLGSVGIPIWLT

Query:  EVDV
        EVDV
Subjt:  EVDV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTACCGCACGCCATGGATCTTCTTCTTTTTCTCTTCCTAGCTCATTTATCATCTCCTTATCATTTTGTCTCGCTCTCCTTAGATCTCTTTTCTGCGAAGTTTTACCT
ACAAACGAAGTCACCGATTGCAAGCTTTGCCACCATGTGGTCGTCAGAGGAATCGACCAGGCGGAGTGCTTCCGGTTTGTTCTATAATTGGGCGATGAAAGTCAATCAAT
CGGTTACATTGTTTCTTTATGAGTTTAATACCATTGAGTATAGCGGCGATGCGATTTCTTCTCCAGCTAGGTATTTTCAGAAGCTAGATGCTATTAGACGATTTCTTGGT
AATAGTGGCGGCAGATTTGTGATTGGACTGGAATCACATTTCGGTCTTTCTCCTAATATTCCTTATATGAGATCCACCATTAATACGCTTGGTTCTGTTGGAATTCCGAT
TTGGCTCACCGAAGTAGATGTTTATAACTTGCAAAATCAAGTACAGTTCTTGAAATCTTACTCAAACAAATTAATGTTTATTCTGCCAACTTACTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTACCGCACGCCATGGATCTTCTTCTTTTTCTCTTCCTAGCTCATTTATCATCTCCTTATCATTTTGTCTCGCTCTCCTTAGATCTCTTTTCTGCGAAGTTTTACCT
ACAAACGAAGTCACCGATTGCAAGCTTTGCCACCATGTGGTCGTCAGAGGAATCGACCAGGCGGAGTGCTTCCGGTTTGTTCTATAATTGGGCGATGAAAGTCAATCAAT
CGGTTACATTGTTTCTTTATGAGTTTAATACCATTGAGTATAGCGGCGATGCGATTTCTTCTCCAGCTAGGTATTTTCAGAAGCTAGATGCTATTAGACGATTTCTTGGT
AATAGTGGCGGCAGATTTGTGATTGGACTGGAATCACATTTCGGTCTTTCTCCTAATATTCCTTATATGAGATCCACCATTAATACGCTTGGTTCTGTTGGAATTCCGAT
TTGGCTCACCGAAGTAGATGTTTATAACTTGCAAAATCAAGTACAGTTCTTGAAATCTTACTCAAACAAATTAATGTTTATTCTGCCAACTTACTGTTGA
Protein sequenceShow/hide protein sequence
MLPHAMDLLLFLFLAHLSSPYHFVSLSLDLFSAKFYLQTKSPIASFATMWSSEESTRRSASGLFYNWAMKVNQSVTLFLYEFNTIEYSGDAISSPARYFQKLDAIRRFLG
NSGGRFVIGLESHFGLSPNIPYMRSTINTLGSVGIPIWLTEVDVYNLQNQVQFLKSYSNKLMFILPTYC