; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10018716 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10018716
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionProtein SOB FIVE-LIKE 5
Genome locationChr04:7378703..7379898
RNA-Seq ExpressionHG10018716
SyntenyHG10018716
Gene Ontology termsGO:0009691 - cytokinin biosynthetic process (biological process)
GO:0016020 - membrane (cellular component)
InterPro domainsIPR044670 - SOB-five-Like (SOFL) family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8645840.1 hypothetical protein Csa_017066 [Cucumis sativus]3.0e-4166.86Show/hide
Query:  MDHSHNLFVSSDGSVESGWTVYLEN-SSSYFSRRINGS-FDVHKDL------EDDEELDLSMVSDASSGPQIFRERE----VVFPENETGPR---CG---
        MDH HNLFVSSDGSVESGWTVYLEN SSSYFSRRI+ S FD HKD       ++DEE+DLSMVSDASSGPQ F E      V FP+N   P    C    
Subjt:  MDHSHNLFVSSDGSVESGWTVYLEN-SSSYFSRRINGS-FDVHKDL------EDDEELDLSMVSDASSGPQIFRERE----VVFPENETGPR---CG---

Query:  --SFQKTGRKMKGGDDRRQRRDRQEQTTSFLDDTATSDPNFVNFNNSESSTYQNQFNTMRQSSLSGNQR
          S  KTGRKMKG  +RR    RQEQTTSFLDDTATSDPNF   NNSE+S+YQNQFNT+R+SS SGNQR
Subjt:  --SFQKTGRKMKGGDDRRQRRDRQEQTTSFLDDTATSDPNFVNFNNSESSTYQNQFNTMRQSSLSGNQR

XP_008455048.1 PREDICTED: uncharacterized protein LOC103495318 [Cucumis melo]4.1e-4670.3Show/hide
Query:  MDHSHNLFVSSDGSVESGWTVYLENSSSYFSRRINGSFDVHKDLEDDE--ELDLSMVSDASSGPQIFRE---REVVFPENETGP-------RCGSFQKTG
        MDH  NLFVSSDGSVESGWTVYLENSSSYFSRRI+   D + D +DDE  E+DLSMVSDASSGPQIF E    E+VFP+N   P         GS  KTG
Subjt:  MDHSHNLFVSSDGSVESGWTVYLENSSSYFSRRINGSFDVHKDLEDDE--ELDLSMVSDASSGPQIFRE---REVVFPENETGP-------RCGSFQKTG

Query:  RKMKGGDDRRQRRDRQEQTTSFLDDTATSDPNFVNFNNSESSTYQNQFNTMRQSSLSGNQRQKNQ
        RKMKGG+  R    RQ+QTTSFLDDTATSDPNF N NNSE+STYQNQFN++R+SSLSGNQRQKNQ
Subjt:  RKMKGGDDRRQRRDRQEQTTSFLDDTATSDPNFVNFNNSESSTYQNQFNTMRQSSLSGNQRQKNQ

XP_011659723.1 uncharacterized protein LOC105436243 [Cucumis sativus]2.5e-4367.63Show/hide
Query:  MDHSHNLFVSSDGSVESGWTVYLEN-SSSYFSRRINGS-FDVHKDL------EDDEELDLSMVSDASSGPQIFRERE----VVFPENETGPR---CG---
        MDH HNLFVSSDGSVESGWTVYLEN SSSYFSRRI+ S FD HKD       ++DEE+DLSMVSDASSGPQ F E      V FP+N   P    C    
Subjt:  MDHSHNLFVSSDGSVESGWTVYLEN-SSSYFSRRINGS-FDVHKDL------EDDEELDLSMVSDASSGPQIFRERE----VVFPENETGPR---CG---

Query:  --SFQKTGRKMKGGDDRRQRRDRQEQTTSFLDDTATSDPNFVNFNNSESSTYQNQFNTMRQSSLSGNQRQKNQ
          S  KTGRKMKG  +RR    RQEQTTSFLDDTATSDPNF   NNSE+S+YQNQFNT+R+SS SGNQRQKNQ
Subjt:  --SFQKTGRKMKGGDDRRQRRDRQEQTTSFLDDTATSDPNFVNFNNSESSTYQNQFNTMRQSSLSGNQRQKNQ

XP_022927877.1 uncharacterized protein LOC111434644 isoform X1 [Cucurbita moschata]4.2e-3564.02Show/hide
Query:  MDHSHNLFVSSDGSVESGWTVYLENSSSYFSRRINGSFDVHKDLEDDEELDLSMVSDASSGPQIFREREVVFPENETGPRC------GSFQKTGRKMKGG
        MDH HNLFVSS+GSVESGWT+YLE+SSS F+ RI            +EELDLSM+SDASSGP IFRE E VFPENE+G RC        F K  RKMKGG
Subjt:  MDHSHNLFVSSDGSVESGWTVYLENSSSYFSRRINGSFDVHKDLEDDEELDLSMVSDASSGPQIFREREVVFPENETGPRC------GSFQKTGRKMKGG

Query:  DDRRQRRDRQEQTTSFLDDTATSDPNFVNFNNSESST-YQNQFNTMRQSSLSGNQRQKNQLSQF
        D RR    R EQT SFLDDTA+SDPNF NF+NSESST  QN+         SGNQRQKNQLSQF
Subjt:  DDRRQRRDRQEQTTSFLDDTATSDPNFVNFNNSESST-YQNQFNTMRQSSLSGNQRQKNQLSQF

XP_038887128.1 uncharacterized protein LOC120077318 [Benincasa hispida]6.5e-6082.5Show/hide
Query:  MDHSHNLFVSSDGSVESGWTVYLENSSSYFSRRINGSFDVHKDLEDDEELDLSMVSDASSGPQIFREREVVFPENET-GPRC------GSFQKTGRKMKG
        MDH HNLFVSSDGSVESGWTVYLENSSSYFS RIN SFDVHKDLED+EE+DLSMVSDASSGPQIFRE EV+FPEN++  P C      GS  K+GRK+KG
Subjt:  MDHSHNLFVSSDGSVESGWTVYLENSSSYFSRRINGSFDVHKDLEDDEELDLSMVSDASSGPQIFREREVVFPENET-GPRC------GSFQKTGRKMKG

Query:  GDDRRQRRDRQEQTTSFLDDTATSDPNFVNFNNSESSTYQNQFNTMRQSSLSGNQRQKNQ
        GD+RRQ  DRQEQTTSFLDDTATSDP+F NFNNSESSTYQNQFNTMRQSSLSG QRQKNQ
Subjt:  GDDRRQRRDRQEQTTSFLDDTATSDPNFVNFNNSESSTYQNQFNTMRQSSLSGNQRQKNQ

TrEMBL top hitse value%identityAlignment
A0A0A0K6B3 Uncharacterized protein1.2e-4367.63Show/hide
Query:  MDHSHNLFVSSDGSVESGWTVYLEN-SSSYFSRRINGS-FDVHKDL------EDDEELDLSMVSDASSGPQIFRERE----VVFPENETGPR---CG---
        MDH HNLFVSSDGSVESGWTVYLEN SSSYFSRRI+ S FD HKD       ++DEE+DLSMVSDASSGPQ F E      V FP+N   P    C    
Subjt:  MDHSHNLFVSSDGSVESGWTVYLEN-SSSYFSRRINGS-FDVHKDL------EDDEELDLSMVSDASSGPQIFRERE----VVFPENETGPR---CG---

Query:  --SFQKTGRKMKGGDDRRQRRDRQEQTTSFLDDTATSDPNFVNFNNSESSTYQNQFNTMRQSSLSGNQRQKNQ
          S  KTGRKMKG  +RR    RQEQTTSFLDDTATSDPNF   NNSE+S+YQNQFNT+R+SS SGNQRQKNQ
Subjt:  --SFQKTGRKMKGGDDRRQRRDRQEQTTSFLDDTATSDPNFVNFNNSESSTYQNQFNTMRQSSLSGNQRQKNQ

A0A1S3C0Q6 uncharacterized protein LOC1034953182.0e-4670.3Show/hide
Query:  MDHSHNLFVSSDGSVESGWTVYLENSSSYFSRRINGSFDVHKDLEDDE--ELDLSMVSDASSGPQIFRE---REVVFPENETGP-------RCGSFQKTG
        MDH  NLFVSSDGSVESGWTVYLENSSSYFSRRI+   D + D +DDE  E+DLSMVSDASSGPQIF E    E+VFP+N   P         GS  KTG
Subjt:  MDHSHNLFVSSDGSVESGWTVYLENSSSYFSRRINGSFDVHKDLEDDE--ELDLSMVSDASSGPQIFRE---REVVFPENETGP-------RCGSFQKTG

Query:  RKMKGGDDRRQRRDRQEQTTSFLDDTATSDPNFVNFNNSESSTYQNQFNTMRQSSLSGNQRQKNQ
        RKMKGG+  R    RQ+QTTSFLDDTATSDPNF N NNSE+STYQNQFN++R+SSLSGNQRQKNQ
Subjt:  RKMKGGDDRRQRRDRQEQTTSFLDDTATSDPNFVNFNNSESSTYQNQFNTMRQSSLSGNQRQKNQ

A0A5D3C4P0 Uncharacterized protein1.3e-3467.63Show/hide
Query:  MDHSHNLFVSSDGSVESGWTVYLENSSSYFSRRINGSFDVHKDLEDDE--ELDLSMVSDASSGPQIFRE---REVVFPENETGP-------RCGSFQKTG
        MDH  NLFVSSDGSVESGWTVYLENSSSYFSRRI+   D + D +DDE  E+DLSMVSDASSGPQIF E    E+VFP+N   P         GS  KTG
Subjt:  MDHSHNLFVSSDGSVESGWTVYLENSSSYFSRRINGSFDVHKDLEDDE--ELDLSMVSDASSGPQIFRE---REVVFPENETGP-------RCGSFQKTG

Query:  RKMKGGDDRRQRRDRQEQTTSFLDDTATSDPNFVNFNNS
        RKMKGG+  R    RQ+QTTSFLDDTATSDPNF N NNS
Subjt:  RKMKGGDDRRQRRDRQEQTTSFLDDTATSDPNFVNFNNS

A0A6J1EIF1 uncharacterized protein LOC111434644 isoform X12.0e-3564.02Show/hide
Query:  MDHSHNLFVSSDGSVESGWTVYLENSSSYFSRRINGSFDVHKDLEDDEELDLSMVSDASSGPQIFREREVVFPENETGPRC------GSFQKTGRKMKGG
        MDH HNLFVSS+GSVESGWT+YLE+SSS F+ RI            +EELDLSM+SDASSGP IFRE E VFPENE+G RC        F K  RKMKGG
Subjt:  MDHSHNLFVSSDGSVESGWTVYLENSSSYFSRRINGSFDVHKDLEDDEELDLSMVSDASSGPQIFREREVVFPENETGPRC------GSFQKTGRKMKGG

Query:  DDRRQRRDRQEQTTSFLDDTATSDPNFVNFNNSESST-YQNQFNTMRQSSLSGNQRQKNQLSQF
        D RR    R EQT SFLDDTA+SDPNF NF+NSESST  QN+         SGNQRQKNQLSQF
Subjt:  DDRRQRRDRQEQTTSFLDDTATSDPNFVNFNNSESST-YQNQFNTMRQSSLSGNQRQKNQLSQF

A0A6J1GLV9 uncharacterized protein LOC1114555496.0e-3563.29Show/hide
Query:  DGSVESGWTVYLENSSS-------YFSRRINGSFDV-HKDLEDDEELDLSMVSDASSGPQIFREREVVFPENET--------GPRCGSFQKTGRKMKGGD
        DGS ESGWTVYLENSSS        F+  I  SF V HK   D+ ELDLSMVSDASSGP IF E +V+FPENE          P   +  KT RKMKG +
Subjt:  DGSVESGWTVYLENSSS-------YFSRRINGSFDV-HKDLEDDEELDLSMVSDASSGPQIFREREVVFPENET--------GPRCGSFQKTGRKMKGGD

Query:  DRRQRRDRQEQTTSFLDDTATSDPNFVNFNNSESSTYQNQFNTMRQSSLSGNQRQKNQ
        +RR+RRDR E+TTSFLDDTA+SDP   NFNNSESS+YQ+QFNT+RQSS S NQRQKNQ
Subjt:  DRRQRRDRQEQTTSFLDDTATSDPNFVNFNNSESSTYQNQFNTMRQSSLSGNQRQKNQ

SwissProt top hitse value%identityAlignment
Q8L9K4 Protein SOB FIVE-LIKE 52.8e-0534.62Show/hide
Query:  VSSDGSVESGWTVYLENSSSYFS-------------RRINGSFD---VHKDLEDDEELDLSMVSDASSGPQIFREREVVFPENETGPRCGSFQKTGRKMK
        + S    ESGWT+YL+ S S  S             RR   S+D   VH++ E++EE DLSM+SDASSGP+   E + V   N  G            +K
Subjt:  VSSDGSVESGWTVYLENSSSYFS-------------RRINGSFD---VHKDLEDDEELDLSMVSDASSGPQIFREREVVFPENETGPRCGSFQKTGRKMK

Query:  GGDDRRQRRDRQEQTTSFLDDTATSDPNFVNFNNSESSTYQNQFNTMRQSSLSGNQ
            R ++R   E+  S LDDTA+S P F              F  M Q S+ GN+
Subjt:  GGDDRRQRRDRQEQTTSFLDDTATSDPNFVNFNNSESSTYQNQFNTMRQSSLSGNQ

Arabidopsis top hitse value%identityAlignment
AT1G58460.1 unknown protein5.4e-0431.62Show/hide
Query:  ESGWTVYLENSSSYFSRRINGSFDVHK-DLEDDEELDLSMVSDASSGPQIFREREVVFPENETGPRCGSFQKTGRKMKGGDDRRQRRDRQEQTTSFLDDT
        +SGWT+YL +SSS         FD H  + + + + D SMVSDASSGP  + E  V     +   +     K+  K K      + +   E+  S  DDT
Subjt:  ESGWTVYLENSSSYFSRRINGSFDVHK-DLEDDEELDLSMVSDASSGPQIFREREVVFPENETGPRCGSFQKTGRKMKGGDDRRQRRDRQEQTTSFLDDT

Query:  ATSDPNFVNFNNSESSTYQNQFNTMRQSSLSGNQRQ
        A+S P  V    S    +QNQ+        S + R+
Subjt:  ATSDPNFVNFNNSESSTYQNQFNTMRQSSLSGNQRQ

AT4G33800.1 unknown protein2.0e-0634.62Show/hide
Query:  VSSDGSVESGWTVYLENSSSYFS-------------RRINGSFD---VHKDLEDDEELDLSMVSDASSGPQIFREREVVFPENETGPRCGSFQKTGRKMK
        + S    ESGWT+YL+ S S  S             RR   S+D   VH++ E++EE DLSM+SDASSGP+   E + V   N  G            +K
Subjt:  VSSDGSVESGWTVYLENSSSYFS-------------RRINGSFD---VHKDLEDDEELDLSMVSDASSGPQIFREREVVFPENETGPRCGSFQKTGRKMK

Query:  GGDDRRQRRDRQEQTTSFLDDTATSDPNFVNFNNSESSTYQNQFNTMRQSSLSGNQ
            R ++R   E+  S LDDTA+S P F              F  M Q S+ GN+
Subjt:  GGDDRRQRRDRQEQTTSFLDDTATSDPNFVNFNNSESSTYQNQFNTMRQSSLSGNQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCATAGTCATAATTTATTTGTTTCTTCAGATGGGTCTGTGGAGTCTGGTTGGACAGTGTATTTGGAGAATTCTTCTTCTTATTTTAGTCGAAGAATCAATGGTTC
TTTTGATGTTCATAAGGATCTTGAAGATGATGAAGAACTGGATTTGTCTATGGTTTCTGATGCTTCTTCTGGGCCTCAAATTTTCCGGGAAAGGGAAGTTGTTTTCCCGG
AAAATGAAACTGGTCCGCGCTGCGGAAGTTTTCAGAAAACTGGCCGGAAAATGAAGGGCGGTGACGACCGACGGCAGCGCCGTGATCGGCAGGAGCAAACGACGTCGTTT
CTTGATGACACTGCTACATCTGATCCCAACTTCGTCAACTTCAATAATTCGGAGAGTTCAACCTACCAAAACCAATTTAACACCATGAGACAATCCTCTCTATCTGGAAA
CCAAAGGCAAAAGAATCAGTTAAGCCAATTCCTTCTCTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATCATAGTCATAATTTATTTGTTTCTTCAGATGGGTCTGTGGAGTCTGGTTGGACAGTGTATTTGGAGAATTCTTCTTCTTATTTTAGTCGAAGAATCAATGGTTC
TTTTGATGTTCATAAGGATCTTGAAGATGATGAAGAACTGGATTTGTCTATGGTTTCTGATGCTTCTTCTGGGCCTCAAATTTTCCGGGAAAGGGAAGTTGTTTTCCCGG
AAAATGAAACTGGTCCGCGCTGCGGAAGTTTTCAGAAAACTGGCCGGAAAATGAAGGGCGGTGACGACCGACGGCAGCGCCGTGATCGGCAGGAGCAAACGACGTCGTTT
CTTGATGACACTGCTACATCTGATCCCAACTTCGTCAACTTCAATAATTCGGAGAGTTCAACCTACCAAAACCAATTTAACACCATGAGACAATCCTCTCTATCTGGAAA
CCAAAGGCAAAAGAATCAGTTAAGCCAATTCCTTCTCTCTTAA
Protein sequenceShow/hide protein sequence
MDHSHNLFVSSDGSVESGWTVYLENSSSYFSRRINGSFDVHKDLEDDEELDLSMVSDASSGPQIFREREVVFPENETGPRCGSFQKTGRKMKGGDDRRQRRDRQEQTTSF
LDDTATSDPNFVNFNNSESSTYQNQFNTMRQSSLSGNQRQKNQLSQFLLS