CuGenDBv2

Gene ID	HG10018717
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Magnesium transporter 4 isoform 1
Genome location	Chr04:7415284..7417390
RNA-Seq Expression	HG10018717
Synteny	HG10018717
Gene Ontology terms	GO:0015979 - photosynthesis (biological process) GO:0009507 - chloroplast (cellular component) GO:0009522 - photosystem I (cellular component)
InterPro domains	IPR008796 - Photosystem I reaction centre subunit N, chloroplastic

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7022506.1 hypothetical protein SDJN02_16238, partial [Cucurbita argyrosperma subsp. argyrosperma]

4.7e-43

79.29

Show/hide

Query:  MSSIGQSILMALAVTLNKFASSNVQSVQRNQANKPPTT--TTAATATAGSAIGRRGLLLSAVASTAAAAPEEAVDSRTELLKRYLKKSEDNKEKNDKERL
        MSSIGQ+ILMALA+TLN+FASSNVQSVQRN+   PPTT  TT+A+ +A S I RRGL+LSA    A AA   AVDSRTELLKRYLKKSE+NKEKNDKERL
Subjt:  MSSIGQSILMALAVTLNKFASSNVQSVQRNQANKPPTT--TTAATATAGSAIGRRGLLLSAVASTAAAAPEEAVDSRTELLKRYLKKSEDNKEKNDKERL

Query:  ESYYKRNYKDYFEFVEGSVKNKNELSEAEKGIIEWLKRNK
        ES+YKRNYKDYFEFVEGS+KNK+ELSEAEKGIIEWLKRNK
Subjt:  ESYYKRNYKDYFEFVEGSVKNKNELSEAEKGIIEWLKRNK

XP_004136934.1 uncharacterized protein LOC101214221 [Cucumis sativus]

5.6e-44

81.16

Show/hide

Query:  MSSIGQSILMALAVTLNKFASSNVQSVQRNQANKPPTTTTAATATAGSAIGRRGLLLSAVASTAAAAPEEAVDSRTELLKRYLKKSEDNKEKNDKERLES
        MSSIGQSILMALAVTLNKFASSNVQSVQRN+A         ATAT  S IGRR LLLS +A  +AAA    VDSRTELLKRYLKKSE+NKEKNDKERLES
Subjt:  MSSIGQSILMALAVTLNKFASSNVQSVQRNQANKPPTTTTAATATAGSAIGRRGLLLSAVASTAAAAPEEAVDSRTELLKRYLKKSEDNKEKNDKERLES

Query:  YYKRNYKDYFEFVEGSVKNKNELSEAEKGIIEWLKRNK
        YYKRNYKDYFEFVEGSVKNKNELSEAEKGI+EWLKR+K
Subjt:  YYKRNYKDYFEFVEGSVKNKNELSEAEKGIIEWLKRNK

XP_008455049.1 PREDICTED: uncharacterized protein LOC103495319 [Cucumis melo]

2.3e-45

81.88

Show/hide

Query:  MSSIGQSILMALAVTLNKFASSNVQSVQRNQANKPPTTTTAATATAGSAIGRRGLLLSAVASTAAAAPEEAVDSRTELLKRYLKKSEDNKEKNDKERLES
        MSSIGQSILMALAVTLNKFASSNVQSVQRN+          ATAT  S IGRR LLLS VA  + AA   AVDSRTELLKRYLKKSE+NKEKNDKERLES
Subjt:  MSSIGQSILMALAVTLNKFASSNVQSVQRNQANKPPTTTTAATATAGSAIGRRGLLLSAVASTAAAAPEEAVDSRTELLKRYLKKSEDNKEKNDKERLES

Query:  YYKRNYKDYFEFVEGSVKNKNELSEAEKGIIEWLKRNK
        YYKRNYKDYFEFVEGSVKNKNELSEAEKGI+EWLKRNK
Subjt:  YYKRNYKDYFEFVEGSVKNKNELSEAEKGIIEWLKRNK

XP_022927848.1 uncharacterized protein LOC111434615 [Cucurbita moschata]

2.8e-43

Show/hide

Query:  MSSIGQSILMALAVTLNKFASSNVQSVQRNQANKPPTT--TTAATATAGSAIGRRGLLLSAVASTAAAAPEEAVDSRTELLKRYLKKSEDNKEKNDKERL
        MSSIGQ+ILMALA+TLN+FASSNVQSVQRN+   PPTT  TT+A+ +A S I RRGLLLSA    A AA   AVDSRTELLKRYLKKSE+NKEKNDKERL
Subjt:  MSSIGQSILMALAVTLNKFASSNVQSVQRNQANKPPTT--TTAATATAGSAIGRRGLLLSAVASTAAAAPEEAVDSRTELLKRYLKKSEDNKEKNDKERL

Query:  ESYYKRNYKDYFEFVEGSVKNKNELSEAEKGIIEWLKRNK
        ES+YKRNYKDYFEFVEGS+KNK+ELSEAEKGIIEWLKRNK
Subjt:  ESYYKRNYKDYFEFVEGSVKNKNELSEAEKGIIEWLKRNK

XP_038887440.1 uncharacterized protein LOC120077574 [Benincasa hispida]

5.1e-53

92.03

Show/hide

Query:  MSSIGQSILMALAVTLNKFASSNVQSVQRNQANKPPTTTTAATATAGSAIGRRGLLLSAVASTAAAAPEEAVDSRTELLKRYLKKSEDNKEKNDKERLES
        MSSIGQSILMALAVTLNKFASSNVQSVQRNQANKP T    ATAT GS IGRRGLLLSAVA+ AAA PEEAVDSRTELLKRYLKKSE+NKEKNDKERLES
Subjt:  MSSIGQSILMALAVTLNKFASSNVQSVQRNQANKPPTTTTAATATAGSAIGRRGLLLSAVASTAAAAPEEAVDSRTELLKRYLKKSEDNKEKNDKERLES

Query:  YYKRNYKDYFEFVEGSVKNKNELSEAEKGIIEWLKRNK
        YYKRNYKDYFEFVEGSVKNKNELSEAEKGIIEWLKRNK
Subjt:  YYKRNYKDYFEFVEGSVKNKNELSEAEKGIIEWLKRNK

TrEMBL top hits

e value

%identity

Alignment

A0A1S3C176 uncharacterized protein LOC103495319

1.1e-45

81.88

Show/hide

Query:  MSSIGQSILMALAVTLNKFASSNVQSVQRNQANKPPTTTTAATATAGSAIGRRGLLLSAVASTAAAAPEEAVDSRTELLKRYLKKSEDNKEKNDKERLES
        MSSIGQSILMALAVTLNKFASSNVQSVQRN+          ATAT  S IGRR LLLS VA  + AA   AVDSRTELLKRYLKKSE+NKEKNDKERLES
Subjt:  MSSIGQSILMALAVTLNKFASSNVQSVQRNQANKPPTTTTAATATAGSAIGRRGLLLSAVASTAAAAPEEAVDSRTELLKRYLKKSEDNKEKNDKERLES

Query:  YYKRNYKDYFEFVEGSVKNKNELSEAEKGIIEWLKRNK
        YYKRNYKDYFEFVEGSVKNKNELSEAEKGI+EWLKRNK
Subjt:  YYKRNYKDYFEFVEGSVKNKNELSEAEKGIIEWLKRNK

A0A2I4HLI8 uncharacterized protein LOC109019213

3.9e-35

69.78

Show/hide

Query:  MSSIGQSILMALAVTLNKFASSNVQSVQRNQANKPPTTTTAATATAGSAIGRRGLLLSAVASTAAAAPEEAVDSRTELLKRYLKKSEDNKEKNDKERLES
        MSSIGQSILMAL VT+N+FASSNVQ+V R +   P +TTT  T    S IGRR LLL    ST  AAP+ A DSRT+LLK+YLKKSE+NK KNDKERL+S
Subjt:  MSSIGQSILMALAVTLNKFASSNVQSVQRNQANKPPTTTTAATATAGSAIGRRGLLLSAVASTAAAAPEEAVDSRTELLKRYLKKSEDNKEKNDKERLES

Query:  YYKRNYKDYFEFVEGSVK-NKNELSEAEKGIIEWLKRNK
        YYKRNYKDYFEFVEG+ K N+ +LSEAEKGII+WL+RNK
Subjt:  YYKRNYKDYFEFVEGSVK-NKNELSEAEKGIIEWLKRNK

A0A6J1D574 uncharacterized protein LOC111017388 isoform X1

4.1e-40

77.54

Show/hide

Query:  MSSIGQSILMALAVTLNKFASSNVQSVQRNQANKPPTTTTAATATAGSAIGRRGLLLSAVASTAAAAPEEAVDSRTELLKRYLKKSEDNKEKNDKERLES
        MSSIGQSILMALAVT+NKFASSNVQSV RNQ          + A A S IGRRGLL SAVA  AA AP   VDSRTELLKRYLKKSE NKEKNDKERL+S
Subjt:  MSSIGQSILMALAVTLNKFASSNVQSVQRNQANKPPTTTTAATATAGSAIGRRGLLLSAVASTAAAAPEEAVDSRTELLKRYLKKSEDNKEKNDKERLES

Query:  YYKRNYKDYFEFVEGSVKNKNELSEAEKGIIEWLKRNK
        YYKRNYKDYFEFVEGSV+NK+ELSE EK IIEWL+RNK
Subjt:  YYKRNYKDYFEFVEGSVKNKNELSEAEKGIIEWLKRNK

A0A6J1EM63 uncharacterized protein LOC111434615

1.3e-43

Show/hide

Query:  MSSIGQSILMALAVTLNKFASSNVQSVQRNQANKPPTT--TTAATATAGSAIGRRGLLLSAVASTAAAAPEEAVDSRTELLKRYLKKSEDNKEKNDKERL
        MSSIGQ+ILMALA+TLN+FASSNVQSVQRN+   PPTT  TT+A+ +A S I RRGLLLSA    A AA   AVDSRTELLKRYLKKSE+NKEKNDKERL
Subjt:  MSSIGQSILMALAVTLNKFASSNVQSVQRNQANKPPTT--TTAATATAGSAIGRRGLLLSAVASTAAAAPEEAVDSRTELLKRYLKKSEDNKEKNDKERL

Query:  ESYYKRNYKDYFEFVEGSVKNKNELSEAEKGIIEWLKRNK
        ES+YKRNYKDYFEFVEGS+KNK+ELSEAEKGIIEWLKRNK
Subjt:  ESYYKRNYKDYFEFVEGSVKNKNELSEAEKGIIEWLKRNK

A0A6J1JNZ7 uncharacterized protein LOC111486201

6.7e-43

80.43

Show/hide

Query:  MSSIGQSILMALAVTLNKFASSNVQSVQRNQANKPPTTTTAATATAGSAIGRRGLLLSAVASTAAAAPEEAVDSRTELLKRYLKKSEDNKEKNDKERLES
        MSSIGQ+ILMALA+TLN+FASSNVQSVQRN+   PPTT   AT +A S I RRGLLLSA    A AA   AVDSRTELLKRYLKKSE+NKEKNDKERLES
Subjt:  MSSIGQSILMALAVTLNKFASSNVQSVQRNQANKPPTTTTAATATAGSAIGRRGLLLSAVASTAAAAPEEAVDSRTELLKRYLKKSEDNKEKNDKERLES

Query:  YYKRNYKDYFEFVEGSVKNKNELSEAEKGIIEWLKRNK
        +YKRNYKDYFEFVEGS+KNK+ELSEAEKGIIEWLKRNK
Subjt:  YYKRNYKDYFEFVEGSVKNKNELSEAEKGIIEWLKRNK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G49975.1 INVOLVED IN: photosynthesis; LOCATED IN: photosystem I, chloroplast, thylakoid membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre subunit N (InterPro:IPR008796); Has 34 Blast hits to 34 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

2.6e-31

58.57

Show/hide

Query:  MSSIGQSILMALAVTLNKFASSNVQSVQRNQANKPPTTTTAATATAGSAIGRRGLLLSAVASTAAAAPEEAVDSRTELLKRYLKKSEDNKEKNDKERLES
        MSSI QSILMAL VT+NK+ASSNVQ+V+RN   +   T   A       +GRR +L S+ +  AA     A+ S  +LL++YLKK+E+NK KNDKERL+S
Subjt:  MSSIGQSILMALAVTLNKFASSNVQSVQRNQANKPPTTTTAATATAGSAIGRRGLLLSAVASTAAAAPEEAVDSRTELLKRYLKKSEDNKEKNDKERLES

Query:  YYKRNYKDYFEFVEGSVKNKN--ELSEAEKGIIEWLKRNK
        +YKRNYKDYFEFVEGS+K K   ELSE+EK I+EWLK NK
Subjt:  YYKRNYKDYFEFVEGSVKNKN--ELSEAEKGIIEWLKRNK

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAGTTCCATCGGCCAAAGCATTCTCATGGCCCTCGCCGTCACTCTCAACAAATTCGCTTCCTCTAACGTTCAATCCGTTCAGAGAAACCAAGCCAACAAGCCTCCCAC
CACCACCACCGCCGCCACTGCCACCGCCGGTTCTGCAATCGGAAGAAGAGGCCTCCTCTTGTCCGCCGTTGCTTCCACCGCCGCCGCCGCTCCTGAAGAAGCCGTCGACT
CCAGAACCGAGCTGCTAAAAAGGTACCTCAAGAAGTCTGAAGATAACAAAGAAAAGAATGACAAGGAGAGATTGGAAAGTTACTACAAGCGAAATTACAAAGATTATTTT
GAGTTTGTTGAAGGATCAGTGAAGAATAAGAACGAACTTTCAGAAGCTGAAAAAGGTATAATTGAGTGGCTTAAACGAAATAAATAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MSSIGQSILMALAVTLNKFASSNVQSVQRNQANKPPTTTTAATATAGSAIGRRGLLLSAVASTAAAAPEEAVDSRTELLKRYLKKSEDNKEKNDKERLESYYKRNYKDYF
EFVEGSVKNKNELSEAEKGIIEWLKRNK

HG10018717 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome