CuGenDBv2

Gene ID	HG10018721
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	protein SHORT HYPOCOTYL IN WHITE LIGHT 1-like
Genome location	Chr04:7440108..7442823
RNA-Seq Expression	HG10018721
Synteny	HG10018721
Gene Ontology terms	GO:0009787 - regulation of abscisic acid-activated signaling pathway (biological process) GO:0010100 - negative regulation of photomorphogenesis (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0016757 - transferase activity, transferring glycosyl groups (molecular function)
InterPro domains	IPR039324 - Protein SHORT HYPOCOTYL IN WHITE LIGHT 1

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6588721.1 Protein SHORT HYPOCOTYL IN WHITE LIGHT 1, partial [Cucurbita argyrosperma subsp. sororia]

1.3e-89

89.22

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Query:  MSLSAALSPPSLFSIPQSQSPFPTSRTSLLSHPFQISHTLLRASRRTSNFSQGIDNLVDDRRNWNRSISSDFDIIGGEEDEDEEDEEEDEEEDRSLDLLV
        MSL AALSPPSL+SIP SQ   PTSRTS+LSH  QISHTLLRASRRTSNFSQG+D+LVDDRRNWNRSISSDFDIIGGE+DED+ED EE+EEEDRSLDLLV
Subjt:  MSLSAALSPPSLFSIPQSQSPFPTSRTSLLSHPFQISHTLLRASRRTSNFSQGIDNLVDDRRNWNRSISSDFDIIGGEEDEDEEDEEEDEEEDRSLDLLV

Query:  RFVENVFRKVSRRARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLWVLKAFLEVICTLGTAVFLSILIIRGVWIGILYLQDTRSHRLDQLDDDQHHAWTGA
        RFVENVFRKVS+RARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLW+LKAFLEVICTLGTAVF+SILIIRGVW GILYLQD RSHR D+LDDDQHHAWTGA
Subjt:  RFVENVFRKVSRRARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLWVLKAFLEVICTLGTAVFLSILIIRGVWIGILYLQDTRSHRLDQLDDDQHHAWTGA

Query:  QPAS
        QPAS
Subjt:  QPAS

XP_008455053.1 PREDICTED: uncharacterized protein LOC103495323 [Cucumis melo]

2.2e-89

89.27

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Query:  MSLSAALSPPSLFSIPQSQSPFPTSRTSLLSHPFQISHTLLRASRRTSNFSQGIDNLVDDRRNWNRSISSDFDIIGGEEDEDEEDEE-EDEEEDRSLDLL
        MSL A LSPPSLFSIPQSQ PFPTSRTSLLSHPFQIS+TLLRA+RRTSNFSQG+DN VD+RRNWNR   SDFD+IGGEE+E+EE+EE +DEEEDRSLDLL
Subjt:  MSLSAALSPPSLFSIPQSQSPFPTSRTSLLSHPFQISHTLLRASRRTSNFSQGIDNLVDDRRNWNRSISSDFDIIGGEEDEDEEDEE-EDEEEDRSLDLL

Query:  VRFVENVFRKVSRRARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLWVLKAFLEVICTLGTAVFLSILIIRGVWIGILYLQDTRSHRLDQLDDDQHHAWTG
        VRFVENVFRK SRRARKAVRSVLPQSIPTKLV FSVNGVLMLAFLWVLKAFLEVICTLGTAVF+SILIIRGVWIGILYLQDTRSHRL+Q DDDQHHAWTG
Subjt:  VRFVENVFRKVSRRARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLWVLKAFLEVICTLGTAVFLSILIIRGVWIGILYLQDTRSHRLDQLDDDQHHAWTG

Query:  AQPAS
        AQPAS
Subjt:  AQPAS

XP_022927841.1 protein SHORT HYPOCOTYL IN WHITE LIGHT 1-like [Cucurbita moschata]

2.9e-89

88.73

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Query:  MSLSAALSPPSLFSIPQSQSPFPTSRTSLLSHPFQISHTLLRASRRTSNFSQGIDNLVDDRRNWNRSISSDFDIIGGEEDEDEEDEEEDEEEDRSLDLLV
        MSL AALSPPSL+SIP SQ   PTSRTS+LSH  QISHTLLRASRRTSNFSQG+D+LVDDRRNWNRSISSDFDI+GGE+DED+ED EE+EEEDRSLDLLV
Subjt:  MSLSAALSPPSLFSIPQSQSPFPTSRTSLLSHPFQISHTLLRASRRTSNFSQGIDNLVDDRRNWNRSISSDFDIIGGEEDEDEEDEEEDEEEDRSLDLLV

Query:  RFVENVFRKVSRRARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLWVLKAFLEVICTLGTAVFLSILIIRGVWIGILYLQDTRSHRLDQLDDDQHHAWTGA
        RFVENVFRKVS+RARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLW+LKAFLEVICTLGTAVF+SILIIRGVW GILYLQD RSHR D+LDDDQHHAWTGA
Subjt:  RFVENVFRKVSRRARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLWVLKAFLEVICTLGTAVFLSILIIRGVWIGILYLQDTRSHRLDQLDDDQHHAWTGA

Query:  QPAS
        QPAS
Subjt:  QPAS

XP_022988955.1 protein SHORT HYPOCOTYL IN WHITE LIGHT 1-like [Cucurbita maxima]

1.2e-90

89.71

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Query:  MSLSAALSPPSLFSIPQSQSPFPTSRTSLLSHPFQISHTLLRASRRTSNFSQGIDNLVDDRRNWNRSISSDFDIIGGEEDEDEEDEEEDEEEDRSLDLLV
        MSL AALSPPSL+SIP SQ P PTSRTS+LSH  QISHTLLRASRRTSNFSQG+D+LVDDRRNWNRSISSDFDIIGGE+DED+ED EE+EEEDRSLDLLV
Subjt:  MSLSAALSPPSLFSIPQSQSPFPTSRTSLLSHPFQISHTLLRASRRTSNFSQGIDNLVDDRRNWNRSISSDFDIIGGEEDEDEEDEEEDEEEDRSLDLLV

Query:  RFVENVFRKVSRRARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLWVLKAFLEVICTLGTAVFLSILIIRGVWIGILYLQDTRSHRLDQLDDDQHHAWTGA
        RFVENVFRKVS+RARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLW+LKAFLEVICTLGTAVF+SILIIRGVW GILYLQD RSHR D+LDDDQHHAWTGA
Subjt:  RFVENVFRKVSRRARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLWVLKAFLEVICTLGTAVFLSILIIRGVWIGILYLQDTRSHRLDQLDDDQHHAWTGA

Query:  QPAS
        QPAS
Subjt:  QPAS

XP_038877542.1 protein SHORT HYPOCOTYL IN WHITE LIGHT 1 [Benincasa hispida]

6.5e-97

94.12

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Query:  MSLSAALSPPSLFSIPQSQSPFPTSRTSLLSHPFQISHTLLRASRRTSNFSQGIDNLVDDRRNWNRSISSDFDIIGGEEDEDEEDEEEDEEEDRSLDLLV
        MSLSAALSPPSLFSIPQSQ PFPTSRTSLLSHPFQISHTLLRASRRTSNFSQG+DNLVDDRRNWNRSI SDFD+IGGEE+ED++DE+EDEEEDRSLDLLV
Subjt:  MSLSAALSPPSLFSIPQSQSPFPTSRTSLLSHPFQISHTLLRASRRTSNFSQGIDNLVDDRRNWNRSISSDFDIIGGEEDEDEEDEEEDEEEDRSLDLLV

Query:  RFVENVFRKVSRRARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLWVLKAFLEVICTLGTAVFLSILIIRGVWIGILYLQDTRSHRLDQLDDDQHHAWTGA
        RFVENVFRKVSRRARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLWVLKAFLEVICTLGTAVFLSILIIRGVW GILYLQDTR+HRLDQLDDDQH AWTGA
Subjt:  RFVENVFRKVSRRARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLWVLKAFLEVICTLGTAVFLSILIIRGVWIGILYLQDTRSHRLDQLDDDQHHAWTGA

Query:  QPAS
        QP S
Subjt:  QPAS

TrEMBL top hits

e value

%identity

Alignment

A0A1S3C0Q8 uncharacterized protein LOC103495323

1.1e-89

89.27

Show/hide

Query:  MSLSAALSPPSLFSIPQSQSPFPTSRTSLLSHPFQISHTLLRASRRTSNFSQGIDNLVDDRRNWNRSISSDFDIIGGEEDEDEEDEE-EDEEEDRSLDLL
        MSL A LSPPSLFSIPQSQ PFPTSRTSLLSHPFQIS+TLLRA+RRTSNFSQG+DN VD+RRNWNR   SDFD+IGGEE+E+EE+EE +DEEEDRSLDLL
Subjt:  MSLSAALSPPSLFSIPQSQSPFPTSRTSLLSHPFQISHTLLRASRRTSNFSQGIDNLVDDRRNWNRSISSDFDIIGGEEDEDEEDEE-EDEEEDRSLDLL

Query:  VRFVENVFRKVSRRARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLWVLKAFLEVICTLGTAVFLSILIIRGVWIGILYLQDTRSHRLDQLDDDQHHAWTG
        VRFVENVFRK SRRARKAVRSVLPQSIPTKLV FSVNGVLMLAFLWVLKAFLEVICTLGTAVF+SILIIRGVWIGILYLQDTRSHRL+Q DDDQHHAWTG
Subjt:  VRFVENVFRKVSRRARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLWVLKAFLEVICTLGTAVFLSILIIRGVWIGILYLQDTRSHRLDQLDDDQHHAWTG

Query:  AQPAS
        AQPAS
Subjt:  AQPAS

A0A6J1D3L5 protein SHORT HYPOCOTYL IN WHITE LIGHT 1

9.1e-89

87.38

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Query:  MSLSAALSPPSLFSIPQ--SQSPFPTSRTSLLSHPFQISHTLLRASRRTSNFSQGIDNLVDDRRNWNRSISSDFDIIGGEEDEDEEDEEEDEEEDRSLDL
        MS  AALSPPSLFSIPQ   Q  F +SRTSLLSHPFQISHTLLRASRR SNFSQG+DNLVDDRRNWNR ISSDFDI+GGE+DE++E++EEDEEEDRSLDL
Subjt:  MSLSAALSPPSLFSIPQ--SQSPFPTSRTSLLSHPFQISHTLLRASRRTSNFSQGIDNLVDDRRNWNRSISSDFDIIGGEEDEDEEDEEEDEEEDRSLDL

Query:  LVRFVENVFRKVSRRARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLWVLKAFLEVICTLGTAVFLSILIIRGVWIGILYLQDTRSHRLDQLDDDQHHAWT
        LVRFVENVFRKVS+RARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLWVLKAFL+VICTLGTAVF+SILIIRGVW GILYLQD RSHR DQLD++QHHAWT
Subjt:  LVRFVENVFRKVSRRARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLWVLKAFLEVICTLGTAVFLSILIIRGVWIGILYLQDTRSHRLDQLDDDQHHAWT

Query:  GAQPAS
        GAQPAS
Subjt:  GAQPAS

A0A6J1EIN7 protein SHORT HYPOCOTYL IN WHITE LIGHT 1-like

1.4e-89

88.73

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Query:  MSLSAALSPPSLFSIPQSQSPFPTSRTSLLSHPFQISHTLLRASRRTSNFSQGIDNLVDDRRNWNRSISSDFDIIGGEEDEDEEDEEEDEEEDRSLDLLV
        MSL AALSPPSL+SIP SQ   PTSRTS+LSH  QISHTLLRASRRTSNFSQG+D+LVDDRRNWNRSISSDFDI+GGE+DED+ED EE+EEEDRSLDLLV
Subjt:  MSLSAALSPPSLFSIPQSQSPFPTSRTSLLSHPFQISHTLLRASRRTSNFSQGIDNLVDDRRNWNRSISSDFDIIGGEEDEDEEDEEEDEEEDRSLDLLV

Query:  RFVENVFRKVSRRARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLWVLKAFLEVICTLGTAVFLSILIIRGVWIGILYLQDTRSHRLDQLDDDQHHAWTGA
        RFVENVFRKVS+RARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLW+LKAFLEVICTLGTAVF+SILIIRGVW GILYLQD RSHR D+LDDDQHHAWTGA
Subjt:  RFVENVFRKVSRRARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLWVLKAFLEVICTLGTAVFLSILIIRGVWIGILYLQDTRSHRLDQLDDDQHHAWTGA

Query:  QPAS
        QPAS
Subjt:  QPAS

A0A6J1GJK6 protein SHORT HYPOCOTYL IN WHITE LIGHT 1-like

7.7e-88

87.75

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Query:  MSLSAALSPPSLFSIPQSQSPFPTSRTSLLSHPFQISHTLLRASRRTSNFSQGIDNLVDDRRNWNRSISSDFDIIGGEEDEDEEDEEEDEEEDRSLDLLV
        MSL AA SPPSLF++PQ Q PFPTSRT LLSHPFQ+SH LLRASRR SNFSQG+D+ VDDRRNWN SI SDFD+IGGEE E+EE+E+EDEEEDRSLDLLV
Subjt:  MSLSAALSPPSLFSIPQSQSPFPTSRTSLLSHPFQISHTLLRASRRTSNFSQGIDNLVDDRRNWNRSISSDFDIIGGEEDEDEEDEEEDEEEDRSLDLLV

Query:  RFVENVFRKVSRRARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLWVLKAFLEVICTLGTAVFLSILIIRGVWIGILYLQDTRSHRLDQLDDDQHHAWTGA
        +FVENVFRKVSRRARKAVRSVLPQSIPTKLVGF VNGVLMLAFLWVLKAFLEVICTLGTAVF+SILIIRGVWIGILYLQD RSHRLDQLDDDQ HAWTGA
Subjt:  RFVENVFRKVSRRARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLWVLKAFLEVICTLGTAVFLSILIIRGVWIGILYLQDTRSHRLDQLDDDQHHAWTGA

Query:  QPAS
        QPAS
Subjt:  QPAS

A0A6J1JL13 protein SHORT HYPOCOTYL IN WHITE LIGHT 1-like

5.7e-91

89.71

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Query:  MSLSAALSPPSLFSIPQSQSPFPTSRTSLLSHPFQISHTLLRASRRTSNFSQGIDNLVDDRRNWNRSISSDFDIIGGEEDEDEEDEEEDEEEDRSLDLLV
        MSL AALSPPSL+SIP SQ P PTSRTS+LSH  QISHTLLRASRRTSNFSQG+D+LVDDRRNWNRSISSDFDIIGGE+DED+ED EE+EEEDRSLDLLV
Subjt:  MSLSAALSPPSLFSIPQSQSPFPTSRTSLLSHPFQISHTLLRASRRTSNFSQGIDNLVDDRRNWNRSISSDFDIIGGEEDEDEEDEEEDEEEDRSLDLLV

Query:  RFVENVFRKVSRRARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLWVLKAFLEVICTLGTAVFLSILIIRGVWIGILYLQDTRSHRLDQLDDDQHHAWTGA
        RFVENVFRKVS+RARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLW+LKAFLEVICTLGTAVF+SILIIRGVW GILYLQD RSHR D+LDDDQHHAWTGA
Subjt:  RFVENVFRKVSRRARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLWVLKAFLEVICTLGTAVFLSILIIRGVWIGILYLQDTRSHRLDQLDDDQHHAWTGA

Query:  QPAS
        QPAS
Subjt:  QPAS

SwissProt top hits

e value

%identity

Alignment

F4I3V6 Protein SHORT HYPOCOTYL IN WHITE LIGHT 1

2.6e-16

36.36

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Query:  TSLLSHPFQISHTLLRASRRTSNFSQGIDNLVDDRRNW---NRSISS--------------------DFDIIGGEEDEDEEDEEEDEEEDRSLDLLVRFV
        T+L S     S TL+ AS R  + +    N +  RR +   NRS++S                    ++D++  ++   ++D+EEDE E  S+DLL+RF+
Subjt:  TSLLSHPFQISHTLLRASRRTSNFSQGIDNLVDDRRNW---NRSISS--------------------DFDIIGGEEDEDEEDEEEDEEEDRSLDLLVRFV

Query:  ENVFRKVSRRARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLWVLKAFLEVICTLGTAVFLSILIIRGVWIGILYLQ
         ++F+KVS+R +KA R +LP ++  +LV F+V+G+L+L  L + +AFLEVIC LG  VF  IL+IR  W    + Q
Subjt:  ENVFRKVSRRARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLWVLKAFLEVICTLGTAVFLSILIIRGVWIGILYLQ

Arabidopsis top hits

e value

%identity

Alignment

AT1G69935.1 short hypocotyl in white light1

1.9e-17

36.36

Show/hide

Query:  TSLLSHPFQISHTLLRASRRTSNFSQGIDNLVDDRRNW---NRSISS--------------------DFDIIGGEEDEDEEDEEEDEEEDRSLDLLVRFV
        T+L S     S TL+ AS R  + +    N +  RR +   NRS++S                    ++D++  ++   ++D+EEDE E  S+DLL+RF+
Subjt:  TSLLSHPFQISHTLLRASRRTSNFSQGIDNLVDDRRNW---NRSISS--------------------DFDIIGGEEDEDEEDEEEDEEEDRSLDLLVRFV

Query:  ENVFRKVSRRARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLWVLKAFLEVICTLGTAVFLSILIIRGVWIGILYLQ
         ++F+KVS+R +KA R +LP ++  +LV F+V+G+L+L  L + +AFLEVIC LG  VF  IL+IR  W    + Q
Subjt:  ENVFRKVSRRARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLWVLKAFLEVICTLGTAVFLSILIIRGVWIGILYLQ

AT4G33780.1 FUNCTIONS IN: molecular_function unknown

4.1e-49

56.73

Show/hide

Query:  MSLSAALSPPSLFSIPQSQSP---FPTSRTSLLSHPFQISHTLLRASRRTSNFSQGIDNLVDDRRNWNRSISSDFDIIGGEEDED-EEDEEEDEEEDRSL
        M  SA++S PS  S+   +SP   F  +  +L+    +IS     ASRR+ +F  G D+  DD R+WNR I  ++   G +ED D EED+++ EEEDRSL
Subjt:  MSLSAALSPPSLFSIPQSQSP---FPTSRTSLLSHPFQISHTLLRASRRTSNFSQGIDNLVDDRRNWNRSISSDFDIIGGEEDED-EEDEEEDEEEDRSL

Query:  DLLVRFVENVFRKVSRRARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLWVLKAFLEVICTLGTAVFLSILIIRGVWIGILYLQDTRSHRLDQLDDDQHHA
        DLL+RFVENVFRK+S+RARKAVRS+LP SI TKLVGFSVNGVL+LAFLW+LKAFLEV CTLGT VF SIL+IRG+W G+ Y+Q++R++R+++L DD   A
Subjt:  DLLVRFVENVFRKVSRRARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLWVLKAFLEVICTLGTAVFLSILIIRGVWIGILYLQDTRSHRLDQLDDDQHHA

Query:  WTGAQPAS
        W G QP S
Subjt:  WTGAQPAS

Sequences

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CDS sequence

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ATGTCCTTATCTGCGGCTCTTTCGCCGCCGTCCCTCTTCTCCATTCCTCAATCTCAATCGCCATTTCCAACCTCTCGAACCTCGCTTCTCTCCCATCCCTTCCAAATTTC
TCACACGCTCCTCCGGGCTTCCAGAAGAACCTCCAATTTCTCTCAGGGGATTGATAATTTGGTGGACGATCGGCGTAATTGGAACCGCTCAATTAGCTCCGACTTCGACA
TAATCGGTGGAGAGGAGGACGAAGACGAGGAGGACGAGGAGGAAGATGAGGAAGAGGATAGAAGTTTGGATCTATTGGTTCGGTTTGTTGAGAATGTTTTCAGGAAAGTC
TCGAGGCGAGCTCGGAAGGCTGTGAGATCGGTTCTTCCCCAATCCATCCCTACTAAACTGGTGGGATTTTCTGTTAATGGGGTGCTAATGCTGGCGTTTTTGTGGGTTTT
GAAGGCATTTCTTGAGGTGATATGCACACTTGGAACTGCAGTGTTTTTGAGCATACTCATCATTCGTGGAGTGTGGATTGGCATCTTATATCTGCAAGATACTCGCAGCC
ACAGACTCGATCAACTCGATGATGATCAGCACCATGCCTGGACTGGTGCACAACCTGCATCCTGA

mRNA sequence

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Protein sequence

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MSLSAALSPPSLFSIPQSQSPFPTSRTSLLSHPFQISHTLLRASRRTSNFSQGIDNLVDDRRNWNRSISSDFDIIGGEEDEDEEDEEEDEEEDRSLDLLVRFVENVFRKV
SRRARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLWVLKAFLEVICTLGTAVFLSILIIRGVWIGILYLQDTRSHRLDQLDDDQHHAWTGAQPAS

HG10018721 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome