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HG10018783 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10018783
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionCYSTM domain-containing protein
Genome locationChr04:8388660..8388925
RNA-Seq ExpressionHG10018783
SyntenyHG10018783
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR044850 - Cysteine-rich and transmembrane domain-containing protein WIH1/2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4283958.1 unnamed protein product [Prunus armeniaca]2.5e-1375.47Show/hide
Query:  MSDPKYAYPYPAP-QGGYYQGPPVMAPPQYAAPPPKRQPGFLEGWYAKKLVLC
        M+DPKY YPYPA  QGGYYQGPPVMAPPQYAAPPP+R+PGFLEG  A     C
Subjt:  MSDPKYAYPYPAP-QGGYYQGPPVMAPPQYAAPPPKRQPGFLEGWYAKKLVLC

KAA0031406.1 cysteine-rich and transmembrane domain-containing protein A-like [Cucumis melo var. makuwa]1.7e-1795.56Show/hide
Query:  MSDPKYAYPYPAPQGGYYQGPPVMAPPQYAAPPPKRQPGFLEGWY
        MSDPKYAYPYP PQGGYYQGPPVMAPPQYAAPPPKRQPGFLEGW+
Subjt:  MSDPKYAYPYPAPQGGYYQGPPVMAPPQYAAPPPKRQPGFLEGWY

KAF9609677.1 hypothetical protein IFM89_017856 [Coptis chinensis]3.9e-1476.92Show/hide
Query:  MSDPKYAYPYPAPQGGYYQGPPVMAPPQYAAPPPKRQPGFLEGWYAKKLVLC
        M+DPKYAYPYP P  GYYQGPPVMAPPQYAAPPP+RQPGFLEG  A     C
Subjt:  MSDPKYAYPYPAPQGGYYQGPPVMAPPQYAAPPPKRQPGFLEGWYAKKLVLC

KAG6571885.1 hypothetical protein SDJN03_28613, partial [Cucurbita argyrosperma subsp. sororia]7.1e-1682.69Show/hide
Query:  MSDPKYAYPYPAPQGGYYQGPPVMAPPQYAAPPPKRQPGFLEGWYAKKLVLC
        MSDPKYAYPYP P GGYYQGPPVMAPPQYAAPPPKRQPGFLEG  A     C
Subjt:  MSDPKYAYPYPAPQGGYYQGPPVMAPPQYAAPPPKRQPGFLEGWYAKKLVLC

PQP99874.1 uncharacterized protein Pyn_05607 [Prunus yedoensis var. nudiflora]1.1e-1377.36Show/hide
Query:  MSDPKYAYPYPAP-QGGYYQGPPVMAPPQYAAPPPKRQPGFLEGWYAKKLVLC
        MSDPKY YPYPA  QGGYYQGPPVMAPPQYAAPPP+R+PGFLEG  A     C
Subjt:  MSDPKYAYPYPAP-QGGYYQGPPVMAPPQYAAPPPKRQPGFLEGWYAKKLVLC

TrEMBL top hitse value%identityAlignment
A0A2P5AQS9 Cysteine-rich transmembrane CYSTM domain containing protein4.6e-1376.92Show/hide
Query:  MSDPKYAYPYPAPQGGYYQGPPVMAPPQYAAPPPKRQPGFLEGWYAKKLVLC
        MSDPKYAYPYPA   GYYQGPPVMAPPQYAAPPP+R+PGFLEG  A     C
Subjt:  MSDPKYAYPYPAPQGGYYQGPPVMAPPQYAAPPPKRQPGFLEGWYAKKLVLC

A0A314Y8T5 CYSTM domain-containing protein5.5e-1477.36Show/hide
Query:  MSDPKYAYPYPAP-QGGYYQGPPVMAPPQYAAPPPKRQPGFLEGWYAKKLVLC
        MSDPKY YPYPA  QGGYYQGPPVMAPPQYAAPPP+R+PGFLEG  A     C
Subjt:  MSDPKYAYPYPAP-QGGYYQGPPVMAPPQYAAPPPKRQPGFLEGWYAKKLVLC

A0A5A7SN04 Cysteine-rich and transmembrane domain-containing protein A-like8.2e-1895.56Show/hide
Query:  MSDPKYAYPYPAPQGGYYQGPPVMAPPQYAAPPPKRQPGFLEGWY
        MSDPKYAYPYP PQGGYYQGPPVMAPPQYAAPPPKRQPGFLEGW+
Subjt:  MSDPKYAYPYPAPQGGYYQGPPVMAPPQYAAPPPKRQPGFLEGWY

A0A6J5XT78 CYSTM domain-containing protein1.2e-1375.47Show/hide
Query:  MSDPKYAYPYPAP-QGGYYQGPPVMAPPQYAAPPPKRQPGFLEGWYAKKLVLC
        M+DPKY YPYPA  QGGYYQGPPVMAPPQYAAPPP+R+PGFLEG  A     C
Subjt:  MSDPKYAYPYPAP-QGGYYQGPPVMAPPQYAAPPPKRQPGFLEGWYAKKLVLC

B9SMJ5 CYSTM domain-containing protein2.1e-1378.85Show/hide
Query:  MSDPKYAYPYPAPQGGYYQGPPVMAPPQYAAPPPKRQPGFLEGWYAKKLVLC
        MSDPKYAYPYPA   GYYQGPPVMAPPQYAAPPP+RQPGFLEG  A     C
Subjt:  MSDPKYAYPYPAPQGGYYQGPPVMAPPQYAAPPPKRQPGFLEGWYAKKLVLC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G33660.1 unknown protein6.8e-0956.45Show/hide
Query:  MSDPKYAYPYPAPQGGYYQG--PPVMAPPQY--------AAPPPKRQPGFLEGWYAKKLVLC
        MSDPKYAYPYPAP G Y QG  PPV  PPQY          PPP R+ GFLEG  A     C
Subjt:  MSDPKYAYPYPAPQGGYYQG--PPVMAPPQY--------AAPPPKRQPGFLEGWYAKKLVLC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGATCCCAAATATGCCTATCCCTATCCAGCCCCGCAAGGAGGGTATTATCAAGGGCCACCCGTGATGGCGCCACCACAATATGCCGCCCCGCCGCCCAAAAGACA
GCCGGGCTTCTTGGAGGGATGGTATGCCAAAAAGCTTGTTCTTTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTGATCCCAAATATGCCTATCCCTATCCAGCCCCGCAAGGAGGGTATTATCAAGGGCCACCCGTGATGGCGCCACCACAATATGCCGCCCCGCCGCCCAAAAGACA
GCCGGGCTTCTTGGAGGGATGGTATGCCAAAAAGCTTGTTCTTTGTTGA
Protein sequenceShow/hide protein sequence
MSDPKYAYPYPAPQGGYYQGPPVMAPPQYAAPPPKRQPGFLEGWYAKKLVLC